hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20090525/iprscan-20090525-12195256/chunk_1/iprscan-20090525-12195256.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: bm05723 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00244.10.ls 14-3-3 protein 507.1 1.9e-149 1 PF00244.10.fs 14-3-3 protein 505.1 7.3e-149 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00244.10.fs 1/1 91 324 .. 1 236 [] 505.1 7.3e-149 PF00244.10.ls 1/1 91 324 .. 1 236 [] 507.1 1.9e-149 Alignments of top-scoring domains: PF00244.10.fs: domain 1 of 1, from 91 to 324: score 505.1, E = 7.3e-149 *->reelvylakLaeqaEryeemveamkkvaelgeeLsvEeRnLlsvaYK + elv++akLaeqaEry++m++amk+v+e+g+eLs+EeRnLlsvaYK bm05723 91 KSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYK 137 nvvGarRasWRiissiEqKeeskgnekkvelikeYRekvEkeLskicddv nvvGarR+sWR+issiEqK+e nekk+++ keYRek+E+eL++ic+dv bm05723 138 NVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICNDV 185 LklldkhLipkattaeskvFylKmkGDYyRYlaEfatgeerkeaadksle L+lldk+Lip+at++eskvFylKmkGDY+RYl+E+a+g+++++++ +s++ bm05723 186 LELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQ 235 aYkeAsdiakaelaPthPiRLGLALnFsvFyyeilnspdkAcqLAKqaFd aY+eA++i+k+e++PthPiRLGLALnFsvFyyeilnsp+kAc+LAK+aFd bm05723 236 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFD 285 eAiaeLdtlsEesYKdstLimqLLRDnLtLWtsdaqdee<-* eAiaeLdtl+EesYKdstLimqLLRDnLtLWts++q++e bm05723 286 EAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDE 324 PF00244.10.ls: domain 1 of 1, from 91 to 324: score 507.1, E = 1.9e-149 *->reelvylakLaeqaEryeemveamkkvaelgeeLsvEeRnLlsvaYK + elv++akLaeqaEry++m++amk+v+e+g+eLs+EeRnLlsvaYK bm05723 91 KSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYK 137 nvvGarRasWRiissiEqKeeskgnekkvelikeYRekvEkeLskicddv nvvGarR+sWR+issiEqK+e nekk+++ keYRek+E+eL++ic+dv bm05723 138 NVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICNDV 185 LklldkhLipkattaeskvFylKmkGDYyRYlaEfatgeerkeaadksle L+lldk+Lip+at++eskvFylKmkGDY+RYl+E+a+g+++++++ +s++ bm05723 186 LELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQ 235 aYkeAsdiakaelaPthPiRLGLALnFsvFyyeilnspdkAcqLAKqaFd aY+eA++i+k+e++PthPiRLGLALnFsvFyyeilnsp+kAc+LAK+aFd bm05723 236 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFD 285 eAiaeLdtlsEesYKdstLimqLLRDnLtLWtsdaqdee<-* eAiaeLdtl+EesYKdstLimqLLRDnLtLWts++q++e bm05723 286 EAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDE 324 //