hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-12195256/chunk_1/iprscan-20090525-12195256.nocrc
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Query sequence: bm05723
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00101                                                 495.1   3.3e-144   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00101    1/1      91   330 ..     1   249 []   495.1 3.3e-144

Alignments of top-scoring domains:
SM00101: domain 1 of 1, from 91 to 330: score 495.1, E = 3.3e-144
                   *->ReEnVYmAKLAEQAERYeEMvEfMekvaktvddeqqpkeELtVEERN
                      + E V +AKLAEQAERY+ M+ +M+ v +          EL+ EERN
     bm05723    91    KSELVQKAKLAEQAERYDDMAAAMKAVTEQGH-------ELSNEERN 130  

                   LLSVAYKNviGARRASWRIISSiEqKEeSrgnedhvalikeYRqKiEtEL
                   LLSVAYKNv+GARR SWR+ISSiEqK e   ne +  + keYR+KiE+EL
     bm05723   131 LLSVAYKNVVGARRSSWRVISSIEQKTE--RNEKKQQMGKEYREKIEAEL 178  

                   skICdgILkLLeshLiPsasaaESKVFYlKMKGDYyRYlaEFktgaerKe
                     IC ++L+LL++ LiP a+++ESKVFYlKMKGDY+RYl+E   g  +  
     bm05723   179 QDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQT 228  

                   AAentlvaYksAqdiAlaelppTHPIRLGLALNfSVFYYEILNsPdrACn
                      n + aY+ A +i + e  pTHPIRLGLALNfSVFYYEILNsP++AC+
     bm05723   229 TVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACS 278  

                   LAKqAFDeAIaELDtlgEeSYKDSTLIMQLLrDNLTLWTSDlqddaadei
                   LAK AFDeAIaELDtl EeSYKDSTLIMQLLrDNLTLWTS +q d++d  
     bm05723   279 LAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAG 328  

                   ke<-*
                    +   
     bm05723   329 EG    330  

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