# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm05940.fasta.nr -Q bm05940.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm05940, 656 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6822917 sequences Expectation_n fit: rho(ln(x))= 5.8158+/-0.000194; mu= 10.9925+/- 0.011 mean_var=96.9497+/-18.770, 0's: 39 Z-trim: 46 B-trim: 335 in 1/65 Lambda= 0.130257 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|28558769|sp|P51693.3|APLP1_HUMAN Amyloid-like p ( 650) 4446 845.9 0 gi|1709301|gb|AAB96331.1| amyloid precursor-like p ( 650) 4440 844.8 0 gi|189055335|dbj|BAG35219.1| unnamed protein produ ( 650) 4437 844.2 0 gi|67782338|ref|NP_001019978.1| amyloid precursor- ( 651) 4434 843.6 0 gi|67971210|dbj|BAE01947.1| unnamed protein produc ( 652) 4356 829.0 0 gi|109124413|ref|XP_001099423.1| PREDICTED: amyloi ( 653) 4334 824.8 0 gi|109124411|ref|XP_001099532.1| PREDICTED: amyloi ( 652) 4325 823.2 0 gi|149056329|gb|EDM07760.1| similar to Amyloid bet ( 654) 4037 769.0 0 gi|18256906|gb|AAH21877.1| Amyloid beta (A4) precu ( 654) 3995 761.1 0 gi|416630|sp|Q03157.1|APLP1_MOUSE Amyloid-like pro ( 653) 3989 760.0 0 gi|74196124|dbj|BAE32979.1| unnamed protein produc ( 654) 3983 758.9 1e-216 gi|171846588|gb|AAI61904.1| RGD1561211 protein [Ra ( 644) 3946 751.9 1.3e-214 gi|81294227|gb|AAI08124.1| Amyloid beta (A4) precu ( 642) 3930 748.9 1e-213 gi|74144419|dbj|BAE36060.1| unnamed protein produc ( 655) 3859 735.6 1.1e-209 gi|109458510|ref|XP_577781.2| PREDICTED: similar t ( 613) 3793 723.2 5.6e-206 gi|194215335|ref|XP_001492459.2| PREDICTED: simila ( 617) 3713 708.1 1.9e-201 gi|109461652|ref|XP_001076010.1| PREDICTED: simila ( 557) 3450 658.7 1.3e-186 gi|74221088|dbj|BAE42050.1| unnamed protein produc ( 506) 3121 596.8 5e-168 gi|73948450|ref|XP_533688.2| PREDICTED: similar to ( 834) 2292 441.2 5.8e-121 gi|183986324|gb|AAI66165.1| Unknown (protein for M ( 643) 1309 256.4 1.9e-65 gi|62871740|gb|AAH94260.1| MGC115336 protein [Xeno ( 643) 1297 254.1 9.2e-65 gi|73954445|ref|XP_856368.1| PREDICTED: similar to ( 682) 1037 205.3 4.9e-50 gi|189529061|ref|XP_001342921.2| PREDICTED: amyloi ( 737) 1032 204.4 9.9e-50 gi|30351154|gb|AAP22957.1| amyloid precursor-like ( 357) 869 173.5 9.5e-41 gi|30354705|gb|AAH51999.1| Aplp2 protein [Mus musc ( 707) 810 162.6 3.5e-37 gi|148693392|gb|EDL25339.1| amyloid beta (A4) prec ( 729) 810 162.6 3.6e-37 gi|457740|emb|CAA81583.1| putative protein [Mus mu ( 695) 808 162.3 4.5e-37 gi|37589175|gb|AAH52396.2| Amyloid beta (A4) precu ( 695) 806 161.9 5.8e-37 gi|109484434|ref|XP_001055967.1| PREDICTED: simila ( 709) 806 161.9 5.9e-37 gi|73954459|ref|XP_856660.1| PREDICTED: similar to ( 707) 805 161.7 6.7e-37 gi|73954455|ref|XP_856576.1| PREDICTED: similar to ( 711) 805 161.7 6.7e-37 gi|67971300|dbj|BAE01992.1| unnamed protein produc ( 695) 804 161.5 7.5e-37 gi|73954431|ref|XP_856077.1| PREDICTED: similar to ( 699) 804 161.5 7.5e-37 gi|149027854|gb|EDL83314.1| amyloid beta (A4) prec ( 697) 803 161.3 8.6e-37 gi|109484440|ref|XP_001055911.1| PREDICTED: simila ( 704) 803 161.3 8.6e-37 gi|47227884|emb|CAG09047.1| unnamed protein produc ( 592) 801 160.9 9.8e-37 gi|114641267|ref|XP_001155332.1| PREDICTED: amyloi ( 705) 802 161.1 9.9e-37 gi|119588174|gb|EAW67770.1| amyloid beta (A4) prec ( 654) 801 160.9 1.1e-36 gi|349470|gb|AAA36130.1| binding protein ( 669) 801 160.9 1.1e-36 gi|515629|gb|AAA20039.1| DNA-binding protein [Mus ( 511) 799 160.5 1.1e-36 gi|114641269|ref|XP_001155464.1| PREDICTED: amyloi ( 693) 799 160.6 1.4e-36 gi|1351955|sp|Q06335|APLP2_MOUSE Amyloid-like prot ( 695) 799 160.6 1.4e-36 gi|119588173|gb|EAW67769.1| amyloid beta (A4) prec ( 642) 798 160.3 1.5e-36 gi|553204|gb|AAA35601.1| binding protein ( 695) 798 160.4 1.6e-36 gi|73954435|ref|XP_856156.1| PREDICTED: similar to ( 699) 798 160.4 1.6e-36 gi|73954467|ref|XP_856822.1| PREDICTED: similar to ( 695) 796 160.0 2.1e-36 gi|73954433|ref|XP_856117.1| PREDICTED: similar to ( 704) 795 159.8 2.5e-36 gi|148725726|emb|CAM13008.2| novel protein similar ( 764) 795 159.8 2.6e-36 gi|119919082|ref|XP_001251235.1| PREDICTED: simila ( 767) 782 157.4 1.4e-35 gi|73954437|ref|XP_856203.1| PREDICTED: similar to ( 789) 776 156.3 3.2e-35 >>gi|28558769|sp|P51693.3|APLP1_HUMAN Amyloid-like prote (650 aa) initn: 4446 init1: 4446 opt: 4446 Z-score: 4516.0 bits: 845.9 E(): 0 Smith-Waterman score: 4446; 100.000% identity (100.000% similar) in 650 aa overlap (7-656:1-650) 10 20 30 40 50 60 bm0594 GRKGRDMGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSA :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSA 10 20 30 40 50 70 80 90 100 110 120 bm0594 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI 60 70 80 90 100 110 130 140 150 160 170 180 bm0594 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH 120 130 140 150 160 170 190 200 210 220 230 240 bm0594 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG 180 190 200 210 220 230 250 260 270 280 290 300 bm0594 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGV 240 250 260 270 280 290 310 320 330 340 350 360 bm0594 DIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 DIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHF 300 310 320 330 340 350 370 380 390 400 410 420 bm0594 QSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 QSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALR 360 370 380 390 400 410 430 440 450 460 470 480 bm0594 RYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 RYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLA 420 430 440 450 460 470 490 500 510 520 530 540 bm0594 QELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQDAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 QELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQDAAS 480 490 500 510 520 530 550 560 570 580 590 600 bm0594 PEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 PEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGS 540 550 560 570 580 590 610 620 630 640 650 bm0594 LIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 LIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP 600 610 620 630 640 650 >>gi|1709301|gb|AAB96331.1| amyloid precursor-like prote (650 aa) initn: 4440 init1: 4440 opt: 4440 Z-score: 4509.9 bits: 844.8 E(): 0 Smith-Waterman score: 4440; 99.846% identity (99.846% similar) in 650 aa overlap (7-656:1-650) 10 20 30 40 50 60 bm0594 GRKGRDMGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSA ::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|170 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAPEAPGSA 10 20 30 40 50 70 80 90 100 110 120 bm0594 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI 60 70 80 90 100 110 130 140 150 160 170 180 bm0594 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH 120 130 140 150 160 170 190 200 210 220 230 240 bm0594 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG 180 190 200 210 220 230 250 260 270 280 290 300 bm0594 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGV 240 250 260 270 280 290 310 320 330 340 350 360 bm0594 DIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 DIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHF 300 310 320 330 340 350 370 380 390 400 410 420 bm0594 QSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 QSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALR 360 370 380 390 400 410 430 440 450 460 470 480 bm0594 RYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 RYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLA 420 430 440 450 460 470 490 500 510 520 530 540 bm0594 QELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQDAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 QELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQDAAS 480 490 500 510 520 530 550 560 570 580 590 600 bm0594 PEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 PEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGS 540 550 560 570 580 590 610 620 630 640 650 bm0594 LIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 LIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP 600 610 620 630 640 650 >>gi|189055335|dbj|BAG35219.1| unnamed protein product [ (650 aa) initn: 4437 init1: 4437 opt: 4437 Z-score: 4506.8 bits: 844.2 E(): 0 Smith-Waterman score: 4437; 99.846% identity (99.846% similar) in 650 aa overlap (7-656:1-650) 10 20 30 40 50 60 bm0594 GRKGRDMGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSA :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSA 10 20 30 40 50 70 80 90 100 110 120 bm0594 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|189 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVGQATQAI 60 70 80 90 100 110 130 140 150 160 170 180 bm0594 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH 120 130 140 150 160 170 190 200 210 220 230 240 bm0594 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG 180 190 200 210 220 230 250 260 270 280 290 300 bm0594 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGV 240 250 260 270 280 290 310 320 330 340 350 360 bm0594 DIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 DIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHF 300 310 320 330 340 350 370 380 390 400 410 420 bm0594 QSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 QSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALR 360 370 380 390 400 410 430 440 450 460 470 480 bm0594 RYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 RYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLA 420 430 440 450 460 470 490 500 510 520 530 540 bm0594 QELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQDAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 QELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQDAAS 480 490 500 510 520 530 550 560 570 580 590 600 bm0594 PEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 PEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGGS 540 550 560 570 580 590 610 620 630 640 650 bm0594 LIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 LIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP 600 610 620 630 640 650 >>gi|67782338|ref|NP_001019978.1| amyloid precursor-like (651 aa) initn: 3573 init1: 3573 opt: 4434 Z-score: 4503.8 bits: 843.6 E(): 0 Smith-Waterman score: 4434; 99.846% identity (99.846% similar) in 651 aa overlap (7-656:1-651) 10 20 30 40 50 60 bm0594 GRKGRDMGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSA :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSA 10 20 30 40 50 70 80 90 100 110 120 bm0594 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI 60 70 80 90 100 110 130 140 150 160 170 180 bm0594 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH 120 130 140 150 160 170 190 200 210 220 230 240 bm0594 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG 180 190 200 210 220 230 250 260 270 280 290 300 bm0594 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGV 240 250 260 270 280 290 310 320 330 340 350 360 bm0594 DIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 DIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNEHF 300 310 320 330 340 350 370 380 390 400 410 420 bm0594 QSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 QSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALR 360 370 380 390 400 410 430 440 450 460 470 480 bm0594 RYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 RYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLA 420 430 440 450 460 470 490 500 510 520 530 bm0594 QELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKD-DTPMTLPKGSTEQDAA ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|677 QELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDADTPMTLPKGSTEQDAA 480 490 500 510 520 530 540 550 560 570 580 590 bm0594 SPEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 SPEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGGG 540 550 560 570 580 590 600 610 620 630 640 650 bm0594 SLIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|677 SLIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP 600 610 620 630 640 650 >>gi|67971210|dbj|BAE01947.1| unnamed protein product [M (652 aa) initn: 2489 init1: 2489 opt: 4356 Z-score: 4424.6 bits: 829.0 E(): 0 Smith-Waterman score: 4356; 98.006% identity (99.233% similar) in 652 aa overlap (7-656:1-652) 10 20 30 40 50 60 bm0594 GRKGRDMGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSA :::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|679 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAQGSA 10 20 30 40 50 70 80 90 100 110 120 bm0594 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI 60 70 80 90 100 110 130 140 150 160 170 180 bm0594 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 PMERWCGGARSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH 120 130 140 150 160 170 190 200 210 220 230 240 bm0594 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG 180 190 200 210 220 230 250 260 270 280 290 bm0594 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEE--ETVPPPSSHTLAVVGKVTPTPRPTD ::::::::::::::::::::::::::::::::: : ::::::::::::.:::::::::: gi|679 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEKEERVPPPSSHTLAVVSKVTPTPRPTD 240 250 260 270 280 290 300 310 320 330 340 350 bm0594 GVDIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 GVDIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNE 300 310 320 330 340 350 360 370 380 390 400 410 bm0594 HFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLA ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: : gi|679 HFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQGDPPQAERVLTA 360 370 380 390 400 410 420 430 440 450 460 470 bm0594 LRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPH ::.::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|679 LRHYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVQTHLQVIEERVNQSLGLLDQNPH 420 430 440 450 460 470 480 490 500 510 520 530 bm0594 LAQELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQDA ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|679 LAQELRPQIQELLHSEYLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQDA 480 490 500 510 520 530 540 550 560 570 580 590 bm0594 ASPEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGG ::::::::.::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|679 ASPEKEKMSPLEQYEQKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGG 540 550 560 570 580 590 600 610 620 630 640 650 bm0594 GSLIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 GSLIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP 600 610 620 630 640 650 >>gi|109124413|ref|XP_001099423.1| PREDICTED: amyloid be (653 aa) initn: 2758 init1: 1905 opt: 4334 Z-score: 4402.2 bits: 824.8 E(): 0 Smith-Waterman score: 4334; 97.550% identity (99.081% similar) in 653 aa overlap (7-656:1-653) 10 20 30 40 50 60 bm0594 GRKGRDMGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSA :::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|109 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAQGSA 10 20 30 40 50 70 80 90 100 110 120 bm0594 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI 60 70 80 90 100 110 130 140 150 160 170 180 bm0594 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH ::::::::.:::::.::::::::::::::::::::::::::::::::::::::::::::: gi|109 PMERWCGGARSGSCTHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH 120 130 140 150 160 170 190 200 210 220 230 240 bm0594 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|109 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSARSWPPG 180 190 200 210 220 230 250 260 270 280 290 bm0594 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEET--VPPPSSHTLAVVGKVTPTPRPTD :::::::::::::::::::::::::::::::::: ::::::::::::.:::::::::: gi|109 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEEEERVPPPSSHTLAVVSKVTPTPRPTD 240 250 260 270 280 290 300 310 320 330 340 350 bm0594 GVDIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GVDIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNE 300 310 320 330 340 350 360 370 380 390 400 410 bm0594 HFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLA ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: : gi|109 HFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQGDPPQAERVLTA 360 370 380 390 400 410 420 430 440 450 460 470 bm0594 LRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPH ::.::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|109 LRHYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVQTHLQVIEERVNQSLGLLDQNPH 420 430 440 450 460 470 480 490 500 510 520 530 bm0594 LAQELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKD-DTPMTLPKGSTEQD ::::::::::::::::.:::::::::::::::::::::::::::: :::::::::::::: gi|109 LAQELRPQIQELLHSEYLGPSELEAPAPGGSSEDKGGLQPPDSKDADTPMTLPKGSTEQD 480 490 500 510 520 530 540 550 560 570 580 590 bm0594 AASPEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAG :::::::::.::::::.::::::::::::::::::::::::::::::::::::::::::: gi|109 AASPEKEKMSPLEQYEQKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAG 540 550 560 570 580 590 600 610 620 630 640 650 bm0594 GGSLIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GGSLIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP 600 610 620 630 640 650 >>gi|109124411|ref|XP_001099532.1| PREDICTED: amyloid pr (652 aa) initn: 2473 init1: 2473 opt: 4325 Z-score: 4393.1 bits: 823.2 E(): 0 Smith-Waterman score: 4325; 97.393% identity (98.926% similar) in 652 aa overlap (7-656:1-652) 10 20 30 40 50 60 bm0594 GRKGRDMGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSA :::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|109 MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAQGSA 10 20 30 40 50 70 80 90 100 110 120 bm0594 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI 60 70 80 90 100 110 130 140 150 160 170 180 bm0594 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH ::::::::.:::::.::::::::::::::::::::::::::::::::::::::::::::: gi|109 PMERWCGGARSGSCTHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH 120 130 140 150 160 170 190 200 210 220 230 240 bm0594 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|109 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSARSWPPG 180 190 200 210 220 230 250 260 270 280 290 bm0594 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEET--VPPPSSHTLAVVGKVTPTPRPTD :::::::::::::::::::::::::::::::::: ::::::::::::.:::::::::: gi|109 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEEEERVPPPSSHTLAVVSKVTPTPRPTD 240 250 260 270 280 290 300 310 320 330 340 350 bm0594 GVDIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GVDIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALNE 300 310 320 330 340 350 360 370 380 390 400 410 bm0594 HFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLA ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: : gi|109 HFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQGDPPQAERVLTA 360 370 380 390 400 410 420 430 440 450 460 470 bm0594 LRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPH ::.:::::::::::::::::::::::::::::: ::.:::::::::::::::::::::: gi|109 LRHYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMPSQVQTHLQVIEERVNQSLGLLDQNPH 420 430 440 450 460 470 480 490 500 510 520 530 bm0594 LAQELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQDA ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|109 LAQELRPQIQELLHSEYLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQDA 480 490 500 510 520 530 540 550 560 570 580 590 bm0594 ASPEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGG ::::::::.::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|109 ASPEKEKMSPLEQYEQKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGAGG 540 550 560 570 580 590 600 610 620 630 640 650 bm0594 GSLIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GSLIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP 600 610 620 630 640 650 >>gi|149056329|gb|EDM07760.1| similar to Amyloid beta (A (654 aa) initn: 2346 init1: 2346 opt: 4037 Z-score: 4100.6 bits: 769.0 E(): 0 Smith-Waterman score: 4037; 89.297% identity (97.095% similar) in 654 aa overlap (7-656:1-654) 10 20 30 40 50 60 bm0594 GRKGRDMGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSA :::.::..:: .:: : ::::::::: ::::::: :.:.::::::.:::::::: gi|149 MGPSSPTTRGQGRRRGPPPLPLLLPLSLLLLRAQLAVGNLAGGSPSAAEAPGSA 10 20 30 40 50 70 80 90 100 110 120 bm0594 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI ::::::::::::::::::::::::::::::: ::::::::::::::::.:::::::.::: gi|149 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLLDPQRVLEYCRQMYPELHIARVEQAAQAI 60 70 80 90 100 110 130 140 150 160 170 180 bm0594 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH ::::::::.::: ::::::.::::.::::::::::::::::::::::::::::::::::: gi|149 PMERWCGGTRSGRCAHPHHEVVPFHCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH 120 130 140 150 160 170 190 200 210 220 230 240 bm0594 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG :::::::::::::::::::::::::::::::::::::::.::.::: ::::::::::: : gi|149 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPATPNPSGMAVGDPSTRSWPLG 180 190 200 210 220 230 250 260 270 280 290 bm0594 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEET----VPPPSSHTLAVVGKVTPTPRP .:.::.::::: :::::::::::::::::::::: .::::::: ..:..::::::: gi|149 GRAEGGEDEEEVESFPQPVDDYFVEPPQAEEEEEEEEERAPPPSSHTPVMVSRVTPTPRP 240 250 260 270 280 290 300 310 320 330 340 350 bm0594 TDGVDIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQAL :::::.::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|149 TDGVDVYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADSQSKNLPKADRQAL 300 310 320 330 340 350 360 370 380 390 400 410 bm0594 NEHFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVL ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|149 NEHFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQGDPPQAERVL 360 370 380 390 400 410 420 430 440 450 460 470 bm0594 LALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQN .::::::::::::::::::::::::::::::::::::::.:::::..::.:::::::::: gi|149 MALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVQTHLQVVQERMNQSLGLLDQN 420 430 440 450 460 470 480 490 500 510 520 530 bm0594 PHLAQELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQ ::::::::::::::::.:::::::::: .::.::::::.::::.::::.:.:::::::.: gi|149 PHLAQELRPQIQELLHAEHLGPSELEASVPGSSSEDKGSLQPPESKDDAPVTLPKGSTDQ 480 490 500 510 520 530 540 550 560 570 580 590 bm0594 DAASPEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGA ...: .::..::::::.:::::.:::::::::.:::::::::::::::::.:::::::: gi|149 ESSSSGREKLTPLEQYEQKVNASAPRGFPFHSSDIQRDELAPAGTGVSREALSGLLIMGA 540 550 560 570 580 590 600 610 620 630 640 650 bm0594 GGGSLIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP :::::::::.::::.:::::.::::::::::::::::::::::::::::::::::::::: gi|149 GGGSLIVLSLLLLRKKKPYGTISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP 600 610 620 630 640 650 >>gi|18256906|gb|AAH21877.1| Amyloid beta (A4) precursor (654 aa) initn: 2324 init1: 2324 opt: 3995 Z-score: 4057.9 bits: 761.1 E(): 0 Smith-Waterman score: 3995; 88.838% identity (96.483% similar) in 654 aa overlap (7-656:1-654) 10 20 30 40 50 60 bm0594 GRKGRDMGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSA :::.:::::: .:: ::::::::: ::::::: :.:.:: :::.:::::::: gi|182 MGPTSPAARGQGRRWRPPPLPLLLPLSLLLLRAQLAVGNLAVGSPSAAEAPGSA 10 20 30 40 50 70 80 90 100 110 120 bm0594 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI ::::::::::::::::::::::::::::::: ::::::::::::::::.:::::::.::: gi|182 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLLDPQRVLEYCRQMYPELHIARVEQAAQAI 60 70 80 90 100 110 130 140 150 160 170 180 bm0594 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH ::::::::.::: ::::::.::::.::::::::::::::::::::::::::::::::::: gi|182 PMERWCGGTRSGRCAHPHHEVVPFHCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH 120 130 140 150 160 170 190 200 210 220 230 240 bm0594 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG :::::::::::::::::::::::::::::::::::::::.::.::: :.::::::::: : gi|182 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPATPNPSGMAAGDPSTRSWPLG 180 190 200 210 220 230 250 260 270 280 290 bm0594 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEET----VPPPSSHTLAVVGKVTPTPRP .:.::.::::: :::::::::::::::::::::: .::::::: ..:..::::::: gi|182 GRAEGGEDEEEVESFPQPVDDYFVEPPQAEEEEEEEEERAPPPSSHTPVMVSRVTPTPRP 240 250 260 270 280 290 300 310 320 330 340 350 bm0594 TDGVDIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQAL :::::.::::::::.:::::::::::::::::::::::::::::::.::::::::::::: gi|182 TDGVDVYFGMPGEIGEHEGFLRAKMDLEERRMRQINEVMREWAMADSQSKNLPKADRQAL 300 310 320 330 340 350 360 370 380 390 400 410 bm0594 NEHFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVL ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|182 NEHFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQGDPPQAERVL 360 370 380 390 400 410 420 430 440 450 460 470 bm0594 LALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQN .::::::::::::::::::::::::::::::::::::::.:::::::::.:::::::::: gi|182 MALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVQTHLQVIEERMNQSLGLLDQN 420 430 440 450 460 470 480 490 500 510 520 530 bm0594 PHLAQELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQ ::::::::::::::: .::::::::.: .::.::::::.::::.:::: :.:::::::.: gi|182 PHLAQELRPQIQELLLAEHLGPSELDASVPGSSSEDKGSLQPPESKDDPPVTLPKGSTDQ 480 490 500 510 520 530 540 550 560 570 580 590 bm0594 DAASPEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGA ...: .::..::::::.:::::.:::::::::.::::::::.::::::::.:::::::: gi|182 ESSSSGREKLTPLEQYEQKVNASAPRGFPFHSSDIQRDELAPSGTGVSREALSGLLIMGA 540 550 560 570 580 590 600 610 620 630 640 650 bm0594 GGGSLIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP :::::::::.::::.:::::.::::::::::::::::::::::::::::::::::::::: gi|182 GGGSLIVLSLLLLRKKKPYGTISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP 600 610 620 630 640 650 >>gi|416630|sp|Q03157.1|APLP1_MOUSE Amyloid-like protein (653 aa) initn: 2396 init1: 2324 opt: 3989 Z-score: 4051.8 bits: 760.0 E(): 0 Smith-Waterman score: 3989; 88.838% identity (96.636% similar) in 654 aa overlap (7-656:1-653) 10 20 30 40 50 60 bm0594 GRKGRDMGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGSPGAAEAPGSA :::.:::::: .:: .::::::::: ::::::: :.:.:: :::.:::::::: gi|416 MGPTSPAARGQGRR-WRPPLPLLLPLSLLLLRAQLAVGNLAVGSPSAAEAPGSA 10 20 30 40 50 70 80 90 100 110 120 bm0594 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAI ::::::::::::::::::::::::::::::: ::::::::::::::::.:::::::.::: gi|416 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLLDPQRVLEYCRQMYPELHIARVEQAAQAI 60 70 80 90 100 110 130 140 150 160 170 180 bm0594 PMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH ::::::::.::: ::::::.::::.::::::::::::::::::::::::::::::::::: gi|416 PMERWCGGTRSGRCAHPHHEVVPFHCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRH 120 130 140 150 160 170 190 200 210 220 230 240 bm0594 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDPSGTAVGDPSTRSWPPG :::::::::::::::::::::::::::::::::::::::.::.::: :.::::::::: : gi|416 QEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPATPNPSGMAAGDPSTRSWPLG 180 190 200 210 220 230 250 260 270 280 290 bm0594 SRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEET----VPPPSSHTLAVVGKVTPTPRP .:.::.::::: :::::::::::::::::::::: .::::::: ..:..::::::: gi|416 GRAEGGEDEEEVESFPQPVDDYFVEPPQAEEEEEEEEERAPPPSSHTPVMVSRVTPTPRP 240 250 260 270 280 290 300 310 320 330 340 350 bm0594 TDGVDIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQAL :::::.::::::::.:::::::::::::::::::::::::::::::.::::::::::::: gi|416 TDGVDVYFGMPGEIGEHEGFLRAKMDLEERRMRQINEVMREWAMADSQSKNLPKADRQAL 300 310 320 330 340 350 360 370 380 390 400 410 bm0594 NEHFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVL ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|416 NEHFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQGDPPQAERVL 360 370 380 390 400 410 420 430 440 450 460 470 bm0594 LALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQN .::::::::::::::::::::::::::::::::::::::.:::::::::.:::::::::: gi|416 MALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVQTHLQVIEERMNQSLGLLDQN 420 430 440 450 460 470 480 490 500 510 520 530 bm0594 PHLAQELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDDTPMTLPKGSTEQ ::::::::::::::: .::::::::.: .::.::::::.::::.:::: :.:::::::.: gi|416 PHLAQELRPQIQELLLAEHLGPSELDASVPGSSSEDKGSLQPPESKDDPPVTLPKGSTDQ 480 490 500 510 520 530 540 550 560 570 580 590 bm0594 DAASPEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREAVSGLLIMGA ...: .::..::::::.:::::.:::::::::.::::::::.::::::::.:::::::: gi|416 ESSSSGREKLTPLEQYEQKVNASAPRGFPFHSSDIQRDELAPSGTGVSREALSGLLIMGA 540 550 560 570 580 590 600 610 620 630 640 650 bm0594 GGGSLIVLSMLLLRRKKPYGAISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP :::::::::.::::.:::::.::::::::::::::::::::::::::::::::::::::: gi|416 GGGSLIVLSLLLLRKKKPYGTISHGVVEVDPMLTLEEQQLRELQRHGYENPTYRFLEERP 600 610 620 630 640 650 656 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Fri Aug 8 01:46:50 2008 done: Fri Aug 8 01:48:50 2008 Total Scan time: 947.060 Total Display time: 0.280 Function used was FASTA [version 34.26.5 April 26, 2007]