hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-01545425/chunk_1/iprscan-20080808-01545425.nocrc
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Query sequence: bm05942
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00171.12.fs Aldehyde dehydrogenase family                  882.5   1.9e-271   1
PF00171.12.ls Aldehyde dehydrogenase family                  884.6   4.3e-263   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00171.12.fs   1/1      48   511 ..     1   479 []   882.5 1.9e-271
PF00171.12.ls   1/1      48   511 ..     1   479 []   884.6 4.3e-263

Alignments of top-scoring domains:
PF00171.12.fs: domain 1 of 1, from 48 to 511: score 882.5, E = 1.9e-271
                   *->WvdsssGsetievinPathgeviatvpaataeDvdaAvaAAraAfk.
                      W+d+ s  +t++++nP+t gevi++v+++++eDvd+Av+AAraAf+ 
     bm05942    48    WHDAVSR-KTFPTVNPST-GEVICQVAEGDKEDVDKAVKAARAAFQl 92   

                   sGaWaktppaeRariLrkaAdlleeradeLAeletlEtGKplaeArgaev
                   +++W+++++++R+r+L ++Adl+e+++  LA+letl++GKp+  ++ ++ 
     bm05942    93 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDL 142  

                   praidtlryyAglarkleGetipsdtdapggpgrlaytrRePvGVVgaIt
                   +++  +lryyAg+a+k++G+tip+d       ++++ytr+ePvGV+g+I+
     bm05942   143 DMVLKCLRYYAGWADKYHGKTIPID------GDFFSYTRHEPVGVCGQII 186  

                   PWNFPlllaawKiAPALAaGNtVVlKPaElTPlsalllAelfeeAGlPaG
                   PWNFPll+ awK++PALA+GN+VV+K aE+TPl+al++A l++eAG+P+G
     bm05942   187 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPG 236  

                   VlNvVtGsGsevGdaLveHPdvdkvsFTGSTavGrrIaeaAalknlKrvt
                   V+N+V+G+G+++G+a+++H+dvdkv+FTGST+ Gr I  aA+ +nlKrvt
     bm05942   237 VVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVT 286  

                   LELGGKsPlIVfdDADLdaAvegavfgaFfnaGQvCtAgsRllVhesiyD
                   LELGGKsP+I++ DAD+d+Ave a f+ Ffn+GQ+C+AgsR +V+e+iyD
     bm05942   287 LELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYD 336  

                   eFverlveaakklkvGdPlDpdtdiGPliskkqlekvlsyiedAkeeGAk
                   eFver v++ak+ +vG+P+D  t+ GP++++ q++k+l+yi+ +k+eGAk
     bm05942   337 EFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAK 386  

                   lltGGerrpeeaglekGyfvePTvladVtpdmriaqEEiFGPVlsvipFd
                   ll+GG+ +      ++Gyf++PTv+ dV + m+ia+EEiFGPV+ +++F+
     bm05942   387 LLCGGGIAA-----DRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 431  

                   deeEAIelANdteYGLaagVfTrDldrAlrvarrleaGtVwiNdyttgdp
                   ++eE++ +AN++ YGLaa+VfT+Dld+A + +++l+aGtVw+N+y ++++
     bm05942   432 TIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA 481  

                   eaaqPFGGfKqSGiGgREgGkegleeYtetKtV<-*
                   ++  PFGG+K+SG G RE+G++gl++Yte+KtV   
     bm05942   482 QS--PFGGYKMSGSG-RELGEYGLQAYTEVKTV    511  

PF00171.12.ls: domain 1 of 1, from 48 to 511: score 884.6, E = 4.3e-263
                   *->WvdsssGsetievinPathgeviatvpaataeDvdaAvaAAraAfk.
                      W+d+ s  +t++++nP+t gevi++v+++++eDvd+Av+AAraAf+ 
     bm05942    48    WHDAVSR-KTFPTVNPST-GEVICQVAEGDKEDVDKAVKAARAAFQl 92   

                   sGaWaktppaeRariLrkaAdlleeradeLAeletlEtGKplaeArgaev
                   +++W+++++++R+r+L ++Adl+e+++  LA+letl++GKp+  ++ ++ 
     bm05942    93 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDL 142  

                   praidtlryyAglarkleGetipsdtdapggpgrlaytrRePvGVVgaIt
                   +++  +lryyAg+a+k++G+tip+d       ++++ytr+ePvGV+g+I+
     bm05942   143 DMVLKCLRYYAGWADKYHGKTIPID------GDFFSYTRHEPVGVCGQII 186  

                   PWNFPlllaawKiAPALAaGNtVVlKPaElTPlsalllAelfeeAGlPaG
                   PWNFPll+ awK++PALA+GN+VV+K aE+TPl+al++A l++eAG+P+G
     bm05942   187 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPG 236  

                   VlNvVtGsGsevGdaLveHPdvdkvsFTGSTavGrrIaeaAalknlKrvt
                   V+N+V+G+G+++G+a+++H+dvdkv+FTGST+ Gr I  aA+ +nlKrvt
     bm05942   237 VVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVT 286  

                   LELGGKsPlIVfdDADLdaAvegavfgaFfnaGQvCtAgsRllVhesiyD
                   LELGGKsP+I++ DAD+d+Ave a f+ Ffn+GQ+C+AgsR +V+e+iyD
     bm05942   287 LELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYD 336  

                   eFverlveaakklkvGdPlDpdtdiGPliskkqlekvlsyiedAkeeGAk
                   eFver v++ak+ +vG+P+D  t+ GP++++ q++k+l+yi+ +k+eGAk
     bm05942   337 EFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAK 386  

                   lltGGerrpeeaglekGyfvePTvladVtpdmriaqEEiFGPVlsvipFd
                   ll+GG+ +      ++Gyf++PTv+ dV + m+ia+EEiFGPV+ +++F+
     bm05942   387 LLCGGGIAA-----DRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 431  

                   deeEAIelANdteYGLaagVfTrDldrAlrvarrleaGtVwiNdyttgdp
                   ++eE++ +AN++ YGLaa+VfT+Dld+A + +++l+aGtVw+N+y ++++
     bm05942   432 TIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGA 481  

                   eaaqPFGGfKqSGiGgREgGkegleeYtetKtV<-*
                   ++  PFGG+K+SG G RE+G++gl++Yte+KtV   
     bm05942   482 QS--PFGGYKMSGSG-RELGEYGLQAYTEVKTV    511  

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