# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm05954.fasta.nr -Q bm05954.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm05954, 265 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8973999 sequences Expectation_n fit: rho(ln(x))= 5.1923+/-0.000186; mu= 8.9413+/- 0.010 mean_var=72.5369+/-14.477, 0's: 24 Z-trim: 89 B-trim: 2904 in 1/66 Lambda= 0.150590 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|74732795|sp|Q9BPW5.1|RSLBB_HUMAN RecName: Full= ( 248) 1619 360.4 1.9e-97 gi|14041839|dbj|BAB55008.1| unnamed protein produc ( 248) 1607 357.8 1.2e-96 gi|149702748|ref|XP_001493884.1| PREDICTED: simila ( 248) 1572 350.2 2.2e-94 gi|75057792|sp|Q5E9J3.1|RSLBB_BOVIN RecName: Full= ( 248) 1568 349.3 4.1e-94 gi|73975281|ref|XP_853940.1| PREDICTED: similar to ( 252) 1561 347.8 1.2e-93 gi|114594814|ref|XP_001139797.1| PREDICTED: simila ( 397) 1562 348.2 1.5e-93 gi|81879880|sp|Q922H7.1|RSLBB_MOUSE RecName: Full= ( 247) 1534 341.9 6.8e-92 gi|81884785|sp|Q6IMA7.1|RSLBB_RAT RecName: Full=Ra ( 247) 1525 340.0 2.6e-91 gi|126331649|ref|XP_001363971.1| PREDICTED: simila ( 254) 1466 327.2 2e-87 gi|109074861|ref|XP_001089688.1| PREDICTED: simila ( 206) 1298 290.6 1.6e-76 gi|50746993|ref|XP_420710.1| PREDICTED: similar to ( 241) 1275 285.7 5.8e-75 gi|61563659|gb|AAX46799.1| RAS-like family 11 memb ( 195) 1249 280.0 2.5e-73 gi|82179014|sp|Q5FVY2.1|RSLBB_XENTR RecName: Full= ( 247) 1223 274.4 1.5e-71 gi|82177243|sp|Q8AVS6.1|RSLBB_XENLA RecName: Full= ( 248) 1213 272.2 6.8e-71 gi|224049904|ref|XP_002193178.1| PREDICTED: simila ( 218) 1152 258.9 6e-67 gi|115490913|gb|ABI97979.1| RAS-like family 11 mem ( 244) 984 222.4 6.3e-56 gi|82237411|sp|Q6P0U3.1|RSLBB_DANRE RecName: Full= ( 244) 984 222.4 6.3e-56 gi|27881921|gb|AAH44471.1| RAS-like, family 11, me ( 244) 979 221.4 1.3e-55 gi|12835767|dbj|BAB23353.1| unnamed protein produc ( 188) 970 219.3 4.2e-55 gi|126327585|ref|XP_001376057.1| PREDICTED: simila ( 242) 832 189.4 5.5e-46 gi|73993498|ref|XP_543158.2| PREDICTED: similar to ( 347) 831 189.3 8.4e-46 gi|118085016|ref|XP_417126.2| PREDICTED: similar t ( 233) 813 185.3 9.3e-45 gi|119904655|ref|XP_582023.3| PREDICTED: similar t ( 370) 807 184.1 3.3e-44 gi|50657360|ref|NP_001002829.1| RAS-like family 11 ( 269) 802 182.9 5.5e-44 gi|160177560|sp|Q6IMA3.2|RSLBA_RAT RecName: Full=R ( 242) 800 182.5 6.8e-44 gi|109120257|ref|XP_001095327.1| PREDICTED: simila ( 242) 800 182.5 6.8e-44 gi|74749333|sp|Q6T310.1|RSLBA_HUMAN RecName: Full= ( 242) 797 181.8 1.1e-43 gi|149730052|ref|XP_001491637.1| PREDICTED: simila ( 242) 789 180.1 3.6e-43 gi|50745916|ref|XP_420297.1| PREDICTED: similar to ( 250) 775 177.0 3e-42 gi|224098345|ref|XP_002199267.1| PREDICTED: simila ( 250) 771 176.2 5.5e-42 gi|224043236|ref|XP_002192451.1| PREDICTED: simila ( 248) 769 175.7 7.4e-42 gi|81891712|sp|Q6IMB1.1|RSLBA_MOUSE RecName: Full= ( 242) 756 172.9 5.1e-41 gi|160175884|sp|A1DZY4.1|RSLBL_DANRE RecName: Full ( 253) 743 170.1 3.8e-40 gi|149613232|ref|XP_001519975.1| PREDICTED: simila ( 160) 732 167.6 1.4e-39 gi|149599020|ref|XP_001519452.1| PREDICTED: simila ( 234) 733 167.9 1.6e-39 gi|109735011|gb|AAI18010.1| Rasl11a protein [Mus m ( 200) 697 160.0 3.2e-37 gi|148673871|gb|EDL05818.1| mCG12751, isoform CRA_ ( 190) 605 140.0 3.2e-31 gi|111606998|emb|CAJ76631.1| Rasl11c protein [Mono ( 270) 606 140.4 3.6e-31 gi|126342102|ref|XP_001377335.1| PREDICTED: simila ( 461) 606 140.5 5.5e-31 gi|47210703|emb|CAF91086.1| unnamed protein produc ( 290) 583 135.4 1.2e-29 gi|149034857|gb|EDL89577.1| RAS-like family 11 mem ( 148) 535 124.7 9.9e-27 gi|149462350|ref|XP_001517680.1| PREDICTED: simila ( 164) 499 117.0 2.4e-24 gi|47219351|emb|CAG10980.1| unnamed protein produc ( 230) 481 113.2 4.8e-23 gi|110758199|ref|XP_001119889.1| PREDICTED: simila ( 216) 413 98.4 1.3e-18 gi|223649254|gb|ACN11385.1| Ras-related and estrog ( 200) 410 97.7 1.9e-18 gi|156540792|ref|XP_001599247.1| PREDICTED: simila ( 216) 409 97.5 2.3e-18 gi|167881044|gb|EDS44427.1| MRAS2 [Culex quinquefa ( 213) 406 96.8 3.6e-18 gi|50729046|ref|XP_416404.1| PREDICTED: similar to ( 199) 405 96.6 4e-18 gi|72077849|ref|XP_785508.1| PREDICTED: similar to ( 209) 404 96.4 4.8e-18 gi|197127572|gb|ACH44070.1| putative RAS-like estr ( 199) 403 96.2 5.4e-18 >>gi|74732795|sp|Q9BPW5.1|RSLBB_HUMAN RecName: Full=Ras- (248 aa) initn: 1619 init1: 1619 opt: 1619 Z-score: 1906.8 bits: 360.4 E(): 1.9e-97 Smith-Waterman score: 1619; 100.000% identity (100.000% similar) in 248 aa overlap (18-265:1-248) 10 20 30 40 50 60 bm0595 HSPVPQSLPARCAAAEAMRLIQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASG ::::::::::::::::::::::::::::::::::::::::::: gi|747 MRLIQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASG 10 20 30 40 70 80 90 100 110 120 bm0595 VGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 VGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQ 50 60 70 80 90 100 130 140 150 160 170 180 bm0595 LNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 LNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVD 110 120 130 140 150 160 190 200 210 220 230 240 bm0595 PQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 PQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPK 170 180 190 200 210 220 250 260 bm0595 SPNMQDLKRRFKQALSAKVRTVTSV ::::::::::::::::::::::::: gi|747 SPNMQDLKRRFKQALSAKVRTVTSV 230 240 >>gi|14041839|dbj|BAB55008.1| unnamed protein product [H (248 aa) initn: 1607 init1: 1607 opt: 1607 Z-score: 1892.7 bits: 357.8 E(): 1.2e-96 Smith-Waterman score: 1607; 99.194% identity (99.597% similar) in 248 aa overlap (18-265:1-248) 10 20 30 40 50 60 bm0595 HSPVPQSLPARCAAAEAMRLIQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASG :: :::::::::::::::::::::::::::::::::::::::: gi|140 MRHIQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASG 10 20 30 40 70 80 90 100 110 120 bm0595 VGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQ ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|140 VGKTALLVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQ 50 60 70 80 90 100 130 140 150 160 170 180 bm0595 LNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|140 LNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVD 110 120 130 140 150 160 190 200 210 220 230 240 bm0595 PQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|140 PQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPK 170 180 190 200 210 220 250 260 bm0595 SPNMQDLKRRFKQALSAKVRTVTSV ::::::::::::::::::::::::: gi|140 SPNMQDLKRRFKQALSAKVRTVTSV 230 240 >>gi|149702748|ref|XP_001493884.1| PREDICTED: similar to (248 aa) initn: 1572 init1: 1572 opt: 1572 Z-score: 1851.6 bits: 350.2 E(): 2.2e-94 Smith-Waterman score: 1572; 95.565% identity (100.000% similar) in 248 aa overlap (18-265:1-248) 10 20 30 40 50 60 bm0595 HSPVPQSLPARCAAAEAMRLIQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASG ::::::::::::::.::.:::.:::.::::::::::::::::: gi|149 MRLIQNMCTIAEYPTPGSAAAADCCLGAAGRRLVKIAVVGASG 10 20 30 40 70 80 90 100 110 120 bm0595 VGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQ :::::::::::::::::::::::::::::::::::::::.:::::::.:::::.:::.:: gi|149 VGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLAIQVQDTPGVQVHENGLSCNEQ 50 60 70 80 90 100 130 140 150 160 170 180 bm0595 LNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVD :::::::::::::::::::.::::::.::::::::::::::::::::::::::::::::: gi|149 LNRCIRWADAVVIVFSITDHKSYELIGQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVD 110 120 130 140 150 160 190 200 210 220 230 240 bm0595 PQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPK ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|149 PQLGLQLASMLGCSFYEVSVSENYNDVYNAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPK 170 180 190 200 210 220 250 260 bm0595 SPNMQDLKRRFKQALSAKVRTVTSV ::::::::::::::::::::::::: gi|149 SPNMQDLKRRFKQALSAKVRTVTSV 230 240 >>gi|75057792|sp|Q5E9J3.1|RSLBB_BOVIN RecName: Full=Ras- (248 aa) initn: 1568 init1: 1568 opt: 1568 Z-score: 1846.9 bits: 349.3 E(): 4.1e-94 Smith-Waterman score: 1568; 95.968% identity (99.194% similar) in 248 aa overlap (18-265:1-248) 10 20 30 40 50 60 bm0595 HSPVPQSLPARCAAAEAMRLIQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASG :::::::::::::::::.:::.:::.::::::::::::::::: gi|750 MRLIQNMCTIAEYPAPGSAAAADCCLGAAGRRLVKIAVVGASG 10 20 30 40 70 80 90 100 110 120 bm0595 VGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQ :::::::::::::::::::::::::::::::::::::::.:::::::::::::.:::.:: gi|750 VGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLAIQVQDTPGIQVHENGLSCTEQ 50 60 70 80 90 100 130 140 150 160 170 180 bm0595 LNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVD ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|750 LNRCIRWADAVVIVFSITDYKSYELTSQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVD 110 120 130 140 150 160 190 200 210 220 230 240 bm0595 PQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPK ::::::::::::::::::::::: ::::.::::::::::::::::.:::::::::::::: gi|750 PQLGLQLASMLGCSFYEVSVSENDNDVYNAFHVLCKEVSHKQQPSGTPEKRRTSLIPRPK 170 180 190 200 210 220 250 260 bm0595 SPNMQDLKRRFKQALSAKVRTVTSV ::::::::::::::::::::::::: gi|750 SPNMQDLKRRFKQALSAKVRTVTSV 230 240 >>gi|73975281|ref|XP_853940.1| PREDICTED: similar to RAS (252 aa) initn: 1461 init1: 1461 opt: 1561 Z-score: 1838.6 bits: 347.8 E(): 1.2e-93 Smith-Waterman score: 1561; 94.841% identity (98.413% similar) in 252 aa overlap (18-265:1-252) 10 20 30 40 50 bm0595 HSPVPQSLPARCAAAEAMRLIQNMCTIAEYPAPGNAAAS----DCCVGAAGRRLVKIAVV :::::::::::::::::.:::. :::.::::::::::::: gi|739 MRLIQNMCTIAEYPAPGSAAAAAAAADCCAGAAGRRLVKIAVV 10 20 30 40 60 70 80 90 100 110 bm0595 GASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLS :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::.:: gi|739 GASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLAIQVQDTPGIQVHENGLS 50 60 70 80 90 100 120 130 140 150 160 170 bm0595 CSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHI :.::::::::::::::::::::::::::::.::::::::::::::::::::::::::::. gi|739 CGEQLNRCIRWADAVVIVFSITDYKSYELIGQLHQHVQQLHLGTRLPVVVVANKADLLHV 110 120 130 140 150 160 180 190 200 210 220 230 bm0595 KQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLI :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|739 KQVDPQLGLQLASVLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLI 170 180 190 200 210 220 240 250 260 bm0595 PRPKSPNMQDLKRRFKQALSAKVRTVTSV ::::::::::::::::::::::::::::: gi|739 PRPKSPNMQDLKRRFKQALSAKVRTVTSV 230 240 250 >>gi|114594814|ref|XP_001139797.1| PREDICTED: similar to (397 aa) initn: 1562 init1: 1562 opt: 1562 Z-score: 1837.0 bits: 348.2 E(): 1.5e-93 Smith-Waterman score: 1562; 94.922% identity (96.094% similar) in 256 aa overlap (10-265:142-397) 10 20 30 bm0595 HSPVPQSLPARCAAAEAMRLIQNMCTIAEYPAPGNAAAS : :: ...::::::::::::::: gi|114 RRLRGRRARGAAPGAGPRVGRPGIGCGERGAXXAAEXXAXAPRQVCTIAEYPAPGNAAAS 120 130 140 150 160 170 40 50 60 70 80 90 bm0595 DCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLA :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DCYVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLA 180 190 200 210 220 230 100 110 120 130 140 150 bm0595 LQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLG 240 250 260 270 280 290 160 170 180 190 200 210 bm0595 TRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVS 300 310 320 330 340 350 220 230 240 250 260 bm0595 HKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSAKVRTVTSV :::::::::::::::::::::::::::::::::::::::::::::: gi|114 HKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSAKVRTVTSV 360 370 380 390 >>gi|81879880|sp|Q922H7.1|RSLBB_MOUSE RecName: Full=Ras- (247 aa) initn: 1422 init1: 1422 opt: 1534 Z-score: 1807.0 bits: 341.9 E(): 6.8e-92 Smith-Waterman score: 1534; 94.355% identity (98.790% similar) in 248 aa overlap (18-265:1-247) 10 20 30 40 50 60 bm0595 HSPVPQSLPARCAAAEAMRLIQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASG :::::::::::::::::..:: :::.::::::::::::::::: gi|818 MRLIQNMCTIAEYPAPGSTAA-DCCLGAAGRRLVKIAVVGASG 10 20 30 40 70 80 90 100 110 120 bm0595 VGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQ :::::::::::::::::::::::::::::::.:::::::.:::::::::::::.:::::: gi|818 VGKTALVVRFLTKRFIGDYERNAGNLYTRQVHIEGETLAIQVQDTPGIQVHENGLSCSEQ 50 60 70 80 90 100 130 140 150 160 170 180 bm0595 LNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVD ::::::::::::.::::::.::::::::::::::::: :::::::.:::::::::.:::: gi|818 LNRCIRWADAVVLVFSITDHKSYELISQLHQHVQQLHPGTRLPVVLVANKADLLHVKQVD 110 120 130 140 150 160 190 200 210 220 230 240 bm0595 PQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPK ::::::::::::::::::::::::::::.:::::::::: :::::::::::::::::::: gi|818 PQLGLQLASMLGCSFYEVSVSENYNDVYNAFHVLCKEVSPKQQPSSTPEKRRTSLIPRPK 170 180 190 200 210 220 250 260 bm0595 SPNMQDLKRRFKQALSAKVRTVTSV ::::::::::::::::::::::::: gi|818 SPNMQDLKRRFKQALSAKVRTVTSV 230 240 >>gi|81884785|sp|Q6IMA7.1|RSLBB_RAT RecName: Full=Ras-li (247 aa) initn: 1413 init1: 1413 opt: 1525 Z-score: 1796.5 bits: 340.0 E(): 2.6e-91 Smith-Waterman score: 1525; 94.355% identity (98.387% similar) in 248 aa overlap (18-265:1-247) 10 20 30 40 50 60 bm0595 HSPVPQSLPARCAAAEAMRLIQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASG :::::::::::::::::..:: :::.::::::::::::::::: gi|818 MRLIQNMCTIAEYPAPGSTAA-DCCLGAAGRRLVKIAVVGASG 10 20 30 40 70 80 90 100 110 120 bm0595 VGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQ :::::::::::::::::::::::::::::::.:::::::.:::::::::::::.:::.:: gi|818 VGKTALVVRFLTKRFIGDYERNAGNLYTRQVHIEGETLAIQVQDTPGIQVHENGLSCNEQ 50 60 70 80 90 100 130 140 150 160 170 180 bm0595 LNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVD :::::::::::::::::::.::::::::::::::::: :::::::::::::::::.:::: gi|818 LNRCIRWADAVVIVFSITDHKSYELISQLHQHVQQLHPGTRLPVVVVANKADLLHVKQVD 110 120 130 140 150 160 190 200 210 220 230 240 bm0595 PQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPK ::::::::::::::::::::::::::::::::::::::: ::: :.:::::::::::::: gi|818 PQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSPKQQASGTPEKRRTSLIPRPK 170 180 190 200 210 220 250 260 bm0595 SPNMQDLKRRFKQALSAKVRTVTSV ::::::::::::::::::::::::: gi|818 SPNMQDLKRRFKQALSAKVRTVTSV 230 240 >>gi|126331649|ref|XP_001363971.1| PREDICTED: similar to (254 aa) initn: 1446 init1: 1341 opt: 1466 Z-score: 1727.0 bits: 327.2 E(): 2e-87 Smith-Waterman score: 1466; 88.976% identity (96.063% similar) in 254 aa overlap (18-265:1-254) 10 20 30 40 50 bm0595 HSPVPQSLPARCAAAEAMRLIQNMCTIAEYPAPGN----AAAS-DCCVGA-AGRRLVKIA ::::::::::::::.::. :::: :::..: .:::::::: gi|126 MRLIQNMCTIAEYPTPGSSGSAAAASIDCCLSAVSGRRLVKIA 10 20 30 40 60 70 80 90 100 110 bm0595 VVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENS :::::::::::::::::::::::::::::::::::::::::::::.:::::::.:.::.. gi|126 VVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLAIQVQDTPGVQIHEQG 50 60 70 80 90 100 120 130 140 150 160 170 bm0595 LSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLL :::.::::::::::::::::::: ::::::::::::::::::: :.:::::.:::::::: gi|126 LSCNEQLNRCIRWADAVVIVFSIIDYKSYELISQLHQHVQQLHPGARLPVVIVANKADLL 110 120 130 140 150 160 180 190 200 210 220 230 bm0595 HIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTS :::::.:: :::::.::::.::::::::::::::.:::::::::::::: .::::::::: gi|126 HIKQVEPQHGLQLANMLGCTFYEVSVSENYNDVYNAFHVLCKEVSHKQQVASTPEKRRTS 170 180 190 200 210 220 240 250 260 bm0595 LIPRPKSPNMQDLKRRFKQALSAKVRTVTSV ::::::::::::::::::::::::::::::: gi|126 LIPRPKSPNMQDLKRRFKQALSAKVRTVTSV 230 240 250 >>gi|109074861|ref|XP_001089688.1| PREDICTED: similar to (206 aa) initn: 1298 init1: 1298 opt: 1298 Z-score: 1531.1 bits: 290.6 E(): 1.6e-76 Smith-Waterman score: 1298; 99.005% identity (100.000% similar) in 201 aa overlap (65-265:6-206) 40 50 60 70 80 90 bm0595 NAAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIE :::::::::::::::::::::::::::::: gi|109 METNQALVVRFLTKRFIGDYERNAGNLYTRQVQIE 10 20 30 100 110 120 130 140 150 bm0595 GETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQ :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GETLAIQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQ 40 50 60 70 80 90 160 170 180 190 200 210 bm0595 QLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVL ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|109 QLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYSDVYSAFHVL 100 110 120 130 140 150 220 230 240 250 260 bm0595 CKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSAKVRTVTSV ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSAKVRTVTSV 160 170 180 190 200 265 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 01:25:49 2009 done: Thu Jun 18 01:29:21 2009 Total Scan time: 931.450 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]