hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-01353583/chunk_1/iprscan-20090618-01353583.nocrc
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Query sequence: bm06111
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00431                                                 142.3      5e-38   1
SM00355                                                  41.5    1.1e-07   2

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00431      1/1      99   211 ..     1   113 []   142.3    5e-38
SM00355      1/2     467   489 ..     1    23 []    22.1    0.078
SM00355      2/2     495   517 ..     1    23 []    19.4     0.51

Alignments of top-scoring domains:
SM00431: domain 1 of 1, from 99 to 211: score 142.3, E = 5e-38
                   *->pEifRqrFRqFrYqEtsGPREALSRLRELCrqWLRPElhTKEQILEL
                       E +R+rFR F YqE++GP+ +L RL ELCrqWL PE ++KEQ LEL
     bm06111    99    LEFSRLRFREFVYQEAAGPHQTLARLHELCRQWLMPEARSKEQMLEL 145  

                   LVLEQFLTILPgELQaWVrehhPeSGEEAVtLlEdLereLdepgqqVsah
                   LVLEQFL ILP   + WV  ++PeS + A+ L+E+L   L+epg    + 
     bm06111   146 LVLEQFLGILPDKVRPWVVAQYPESCKKAASLVEGLADVLEEPGMLLGSP 195  

                   vhgqevLleemvplga<-*
                   +    +L++ +  +     
     bm06111   196 AGSSSILSDGVYERHM    211  

SM00355: domain 1 of 2, from 467 to 489: score 22.1, E = 0.078
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C + Cg+ f + ++L +H  +H   
     bm06111   467    YACGE-CGEAFAWLsHLMEHHSSH    489  

SM00355: domain 2 of 2, from 495 to 517: score 19.4, E = 0.51
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C+  C k+f+   aL +H+++H   
     bm06111   495    YACQG-CWKTFHFSlALAEHQKTH    517  

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