hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090416/iprscan-20090416-12164764/chunk_1/iprscan-20090416-12164764.nocrc
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Query sequence: bm06513
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07502.4.fs MANEC domain                                   195.3    2.3e-59   1
PF07502.4.ls MANEC domain                                   197.1    3.9e-56   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07502.4.fs   1/1      35   128 ..     1   109 []   195.3  2.3e-59
PF07502.4.ls   1/1      35   128 ..     1   109 []   197.1  3.9e-56

Alignments of top-scoring domains:
PF07502.4.fs: domain 1 of 1, from 35 to 128: score 195.3, E = 2.3e-59
                   *->mpsedClgkfsvGYrAvedtiIrTeeSlsaGArFLgspaevrtqedC
                      ++s++Cl+k+      +ed++I++++Sls+G+r+++++ +++tqedC
     bm06513    35    SASQNCLKKS------LEDVVIDIQSSLSKGIRGNEPI-YTSTQEDC 74   

                   vraCCstpniSGDKACnvavfElpkeprqPaaisaPrCYLFnClypenfv
                   +++CCst+niSGDKACn+++f+++k++rqP+      CYLF+C  p++++
     bm06513    75 INSCCSTKNISGDKACNLMIFDTRKTARQPN------CYLFFC--PNEEA 116  

                   CKFarhkGytsY<-*
                   C+++++kG++sY   
     bm06513   117 CPLKPAKGLMSY    128  

PF07502.4.ls: domain 1 of 1, from 35 to 128: score 197.1, E = 3.9e-56
                   *->mpsedClgkfsvGYrAvedtiIrTeeSlsaGArFLgspaevrtqedC
                      ++s++Cl+k+      +ed++I++++Sls+G+r+++++ +++tqedC
     bm06513    35    SASQNCLKKS------LEDVVIDIQSSLSKGIRGNEPI-YTSTQEDC 74   

                   vraCCstpniSGDKACnvavfElpkeprqPaaisaPrCYLFnClypenfv
                   +++CCst+niSGDKACn+++f+++k++rqP+      CYLF+C  p++++
     bm06513    75 INSCCSTKNISGDKACNLMIFDTRKTARQPN------CYLFFC--PNEEA 116  

                   CKFarhkGytsY<-*
                   C+++++kG++sY   
     bm06513   117 CPLKPAKGLMSY    128  

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