hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-01542013/chunk_1/iprscan-20090618-01542013.nocrc
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Query sequence: bm06951
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF03798.6.ls Longevity-assurance protein (LAG1)             381.0   1.7e-111   1
PF03798.6.fs Longevity-assurance protein (LAG1)             379.1   6.1e-111   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF03798.6.fs   1/1     177   375 ..     1   242 []   379.1 6.1e-111
PF03798.6.ls   1/1     177   375 ..     1   242 []   381.0 1.7e-111

Alignments of top-scoring domains:
PF03798.6.fs: domain 1 of 1, from 177 to 375: score 379.1, E = 6.1e-111
                   *->lYvlyCsRepylwfsdpkscVWegwgdqvYPhqpmsfqlklyYliQl
                      l+vly + e+  w++ p +c W       YP+q+++++l+++Yl++l
     bm06951   177    LSVLY-H-ES--WLWAPVMC-WDR-----YPNQTLKPSLYWWYLLEL 213  

                   aFYlhQSllatLffdtrDIRkDFwemfvHHivTliLFHIvlSYvfNftRv
                   +FYl  Sll+ L+fd++  RkDF+e+++HH+v++iL  +++SY+ N++R+
     bm06951   214 GFYL--SLLIRLPFDVK--RKDFKEQVIHHFVAVIL--MTFSYSANLLRI 257  

                   GlliLlLHDfSDvlLEiaKllkYagkegnsYyklyaLladalFvlFavsf
                   G+l+LlLHD+SD+lLE++K+++Y+++++         ++dalF++F+++f
     bm06951   258 GSLVLLLHDSSDYLLEACKMVNYMQYQQ---------VCDALFLIFSFVF 298  

                   vltRLiifPfwIlwstltesirligaespepdpfyynfqtavirlplFnv
                   ++tRL++fP++Il+++++esi ++g     p+++yy          +Fn 
     bm06951   299 FYTRLVLFPTQILYTIYYESISNRG-----PFFGYY----------FFN- 332  

                   vlLliLqlLhiyWfflIlRFmayrvltdrGeitkDvRSDSEsdde<-*
                    lL++LqlLh++W++lIlR m+y++++ +G+++kD+RSD+E++d+   
     bm06951   333 GLLMLLQLLHVFWSCLILR-MLYSFMK-KGQMEKDIRSDVEESDS    375  

PF03798.6.ls: domain 1 of 1, from 177 to 375: score 381.0, E = 1.7e-111
                   *->lYvlyCsRepylwfsdpkscVWegwgdqvYPhqpmsfqlklyYliQl
                      l+vly + e+  w++ p +c W       YP+q+++++l+++Yl++l
     bm06951   177    LSVLY-H-ES--WLWAPVMC-WDR-----YPNQTLKPSLYWWYLLEL 213  

                   aFYlhQSllatLffdtrDIRkDFwemfvHHivTliLFHIvlSYvfNftRv
                   +FYl  Sll+ L+fd++  RkDF+e+++HH+v++iL  +++SY+ N++R+
     bm06951   214 GFYL--SLLIRLPFDVK--RKDFKEQVIHHFVAVIL--MTFSYSANLLRI 257  

                   GlliLlLHDfSDvlLEiaKllkYagkegnsYyklyaLladalFvlFavsf
                   G+l+LlLHD+SD+lLE++K+++Y+++++         ++dalF++F+++f
     bm06951   258 GSLVLLLHDSSDYLLEACKMVNYMQYQQ---------VCDALFLIFSFVF 298  

                   vltRLiifPfwIlwstltesirligaespepdpfyynfqtavirlplFnv
                   ++tRL++fP++Il+++++esi ++g     p+++yy          +Fn 
     bm06951   299 FYTRLVLFPTQILYTIYYESISNRG-----PFFGYY----------FFN- 332  

                   vlLliLqlLhiyWfflIlRFmayrvltdrGeitkDvRSDSEsdde<-*
                    lL++LqlLh++W++lIlR m+y++++ +G+++kD+RSD+E++d+   
     bm06951   333 GLLMLLQLLHVFWSCLILR-MLYSFMK-KGQMEKDIRSDVEESDS    375  

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