hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-02000708/chunk_1/iprscan-20090618-02000708.nocrc
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Query sequence: bm07084
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00132                                                 147.7    1.2e-39   2
SM00389                                                  90.6    1.9e-22   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00132    1/2      40    91 ..     1    52 []    72.0  7.5e-17
SM00132    2/2      99   154 ..     1    52 []    75.7  5.6e-18
SM00389    1/1     217   279 ..     1    63 []    90.6  1.9e-22

Alignments of top-scoring domains:
SM00132: domain 1 of 2, from 40 to 91: score 72.0, E = 7.5e-17
                   *->kCagCgkpItgdevlralgkvwHpeCFkCskCkkpLggtffekdgkl
                      +CagC++pI +++ l++l+++wH++C +C++Ck++L++++f+++gkl
     bm07084    40    HCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKL 86   

                   yCkdc<-*
                   yCk++   
     bm07084    87 YCKND    91   

SM00132: domain 2 of 2, from 99 to 154: score 75.7, E = 5.6e-18
                   *->kCagCgkpItg.devlralgkvwHpeCFkCskCkkpLgg...tffek
                      kCagC ++I+++d v+ra+ kv+H +CF+C +C+k+L+++++ ++ +
     bm07084    99    KCAGCAQGISPsDLVRRARSKVFHLNCFTCMMCNKQLSTgeeLYIID 145  

                   dgklyCkdc<-*
                   ++k+ Ck +   
     bm07084   146 ENKFVCKED    154  

SM00389: domain 1 of 1, from 217 to 279: score 90.6, E = 1.9e-22
                   *->krrkRtsftpeQleeLEkeFeknpYPsreereeLAkeLgLterqVkv
                      +r +Rt++   Qle+L+++F+ +p+P+r+ re+LA+e+gL  r+++v
     bm07084   217    RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQV 263  

                   WFQNRRakwkrqekkk<-*
                   WFQNRR k++r+++ +   
     bm07084   264 WFQNRRSKERRMKQLS    279  

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