hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090416/iprscan-20090416-12285850/chunk_1/iprscan-20090416-12285850.nocrc
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Query sequence: bm08082
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF03637.7.ls Mob1/phocein family                        313.2    4.2e-91   1
PF03637.7.fs Mob1/phocein family                        311.3    1.6e-90   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF03637.7.fs   1/1      35   205 ..     1   178 []   311.3  1.6e-90
PF03637.7.ls   1/1      35   205 ..     1   178 []   313.2  4.2e-91

Alignments of top-scoring domains:
PF03637.7.fs: domain 1 of 1, from 35 to 205: score 311.3, E = 1.6e-90
                   *->qqyveatLgsgv.dLktiVkLPeGeDlnEWiAvHvvdFFnqiNllYG
                      qqy++++++++++++++i+++PeG+D+++W+++H+++F+ ++N+l++
     bm08082    35    QQYIQQNIRADCsNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAV 81   

                   tisefCtpqtCPqMsAgpryeYlWaDgkekkKPtrlPApqYIdylldWie
                   +++++C+p+tC+qM+A++++++l+a+  +k +P+++PA++Y++++ld+++
     bm08082    82 KLQSECHPDTCTQMTATEQWIFLCAA--HK-TPKECPAIDYTRHTLDGAA 128  

                   nqlnDekiFPtkvgvpFPknFeqivkkIlrRlFRvfaHiYihHFdeiveL
                   ++ln++k+FP++v++++++++++  ++++rR++R+f+H+Y+hH+++++e+
     bm08082   129 CLLNSNKYFPSRVSIKESSVAKL--GSVCRRIYRIFSHAYFHHRQIFDEY 176  

                   glEaHlNtsFkHFvfFvreFnLidrkelepLk<-*
                   ++E++l+++F++Fv+++   nL+++++l++++   
     bm08082   177 ENETFLCHRFTKFVMKY---NLMSKDNLIVPI    205  

PF03637.7.ls: domain 1 of 1, from 35 to 205: score 313.2, E = 4.2e-91
                   *->qqyveatLgsgv.dLktiVkLPeGeDlnEWiAvHvvdFFnqiNllYG
                      qqy++++++++++++++i+++PeG+D+++W+++H+++F+ ++N+l++
     bm08082    35    QQYIQQNIRADCsNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAV 81   

                   tisefCtpqtCPqMsAgpryeYlWaDgkekkKPtrlPApqYIdylldWie
                   +++++C+p+tC+qM+A++++++l+a+  +k +P+++PA++Y++++ld+++
     bm08082    82 KLQSECHPDTCTQMTATEQWIFLCAA--HK-TPKECPAIDYTRHTLDGAA 128  

                   nqlnDekiFPtkvgvpFPknFeqivkkIlrRlFRvfaHiYihHFdeiveL
                   ++ln++k+FP++v++++++++++  ++++rR++R+f+H+Y+hH+++++e+
     bm08082   129 CLLNSNKYFPSRVSIKESSVAKL--GSVCRRIYRIFSHAYFHHRQIFDEY 176  

                   glEaHlNtsFkHFvfFvreFnLidrkelepLk<-*
                   ++E++l+++F++Fv+++   nL+++++l++++   
     bm08082   177 ENETFLCHRFTKFVMKY---NLMSKDNLIVPI    205  

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