hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-02062593/chunk_1/iprscan-20090618-02062593.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: bm08395
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01529.11.fs DHHC zinc finger domain                        106.4    1.5e-29   1
PF01529.11.ls DHHC zinc finger domain                        105.6    1.4e-28   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01529.11.ls   1/1     157   219 ..     1    66 []   105.6  1.4e-28
PF01529.11.fs   1/1     166   219 ..    12    66 .]   106.4  1.5e-29

Alignments of top-scoring domains:
PF01529.11.ls: domain 1 of 1, from 157 to 219: score 105.6, E = 1.4e-28
                   *->ldndkfikdnfCskCnsyKVPpRShHCsvCnkCVlrmDHHCpWinnC
                       ++        C+kC + K P+R+hHCs Cn+CVl+mDHHCpW+nnC
     bm08395   157    RNDIATVSI--CKKCIYPK-PARTHHCSICNRCVLKMDHHCPWLNNC 200  

                   VGlrNyryFllFlfylill<-*
                   VG+ N+ryF+ F+f+++l+   
     bm08395   201 VGHYNHRYFFSFCFFMTLG    219  

PF01529.11.fs: domain 1 of 1, from 166 to 219: score 106.4, E = 1.5e-29
                   *->CskCnsyKVPpRShHCsvCnkCVlrmDHHCpWinnCVGlrNyryFll
                      C+kC + K P+R+hHCs Cn+CVl+mDHHCpW+nnCVG+ N+ryF+ 
     bm08395   166    CKKCIYPK-PARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFS 211  

                   Flfylill<-*
                   F+f+++l+   
     bm08395   212 FCFFMTLG    219  

//