# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm11029.fasta.nr -Q bm11029.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm11029, 494 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8957455 sequences Expectation_n fit: rho(ln(x))= 5.2530+/-0.000186; mu= 9.8674+/- 0.010 mean_var=75.7569+/-14.694, 0's: 32 Z-trim: 220 B-trim: 262 in 1/64 Lambda= 0.147354 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|46577682|sp|P17036.3|ZNF3_HUMAN RecName: Full=Z ( 446) 3058 659.8 4.9e-187 gi|55629028|ref|XP_519246.1| PREDICTED: zinc finge ( 446) 3054 658.9 8.8e-187 gi|50949598|emb|CAH10562.1| hypothetical protein [ ( 446) 3047 657.4 2.5e-186 gi|194218814|ref|XP_001915564.1| PREDICTED: zinc f ( 447) 2856 616.8 4.1e-174 gi|30582675|gb|AAP35564.1| zinc finger protein 3 ( ( 410) 2829 611.1 2.1e-172 gi|30584085|gb|AAP36291.1| Homo sapiens zinc finge ( 411) 2829 611.1 2.1e-172 gi|189067925|dbj|BAG37863.1| unnamed protein produ ( 410) 2824 610.0 4.3e-172 gi|86823997|gb|AAI05477.1| Zinc finger protein 3 [ ( 447) 2762 596.8 4.3e-168 gi|193787250|dbj|BAG52456.1| unnamed protein produ ( 429) 2749 594.1 2.8e-167 gi|109066104|ref|XP_001112671.1| PREDICTED: simila ( 610) 2731 590.4 5.2e-166 gi|149028518|gb|EDL83890.1| rCG55970 [Rattus norve ( 446) 2630 568.8 1.2e-159 gi|26345314|dbj|BAC36308.1| unnamed protein produc ( 439) 2557 553.3 5.5e-155 gi|5640017|gb|AAD45929.1|AF167320_1 zinc finger pr ( 402) 2351 509.4 7.9e-142 gi|119597013|gb|EAW76607.1| zinc finger protein 3 ( 392) 2327 504.3 2.7e-140 gi|119597010|gb|EAW76604.1| zinc finger protein 3 ( 343) 2296 497.7 2.3e-138 gi|51094606|gb|EAL23858.1| zinc finger protein 3 ( ( 387) 2286 495.6 1.1e-137 gi|119597009|gb|EAW76603.1| zinc finger protein 3 ( 386) 2283 495.0 1.7e-137 gi|7020166|dbj|BAA91019.1| unnamed protein product ( 387) 2272 492.6 8.7e-137 gi|8439407|emb|CAB94195.1| zinc finger protein [Ho ( 250) 1667 363.9 3.2e-98 gi|126324549|ref|XP_001366977.1| PREDICTED: hypoth ( 745) 1391 305.5 3.5e-80 gi|825672|emb|CAA30269.1| unnamed protein product ( 195) 1348 296.0 6.9e-78 gi|113413059|ref|XP_292895.5| PREDICTED: similar t ( 522) 1337 294.0 7.5e-77 gi|126324603|ref|XP_001369579.1| PREDICTED: simila ( 559) 1331 292.7 1.9e-76 gi|194220430|ref|XP_001494021.2| PREDICTED: simila ( 511) 1328 292.0 2.8e-76 gi|126304229|ref|XP_001382067.1| PREDICTED: simila ( 507) 1322 290.8 6.7e-76 gi|109113015|ref|XP_001117798.1| PREDICTED: simila ( 445) 1320 290.3 8.1e-76 gi|148696785|gb|EDL28732.1| mCG140597 [Mus musculu ( 476) 1317 289.7 1.3e-75 gi|148697672|gb|EDL29619.1| mCG131131 [Mus musculu ( 413) 1316 289.4 1.4e-75 gi|110681698|ref|NP_001013397.2| hypothetical prot ( 441) 1312 288.6 2.6e-75 gi|123207821|emb|CAM26620.1| novel KRAB box and zi ( 526) 1312 288.6 3e-75 gi|73947917|ref|XP_541480.2| PREDICTED: similar to ( 532) 1310 288.2 4.1e-75 gi|126342468|ref|XP_001377073.1| PREDICTED: simila (1093) 1312 288.9 5.3e-75 gi|126322950|ref|XP_001369114.1| PREDICTED: simila ( 696) 1309 288.1 5.8e-75 gi|126344718|ref|XP_001381592.1| PREDICTED: simila ( 563) 1298 285.7 2.5e-74 gi|149415319|ref|XP_001519206.1| PREDICTED: simila ( 536) 1297 285.5 2.8e-74 gi|114554594|ref|XP_524606.2| PREDICTED: zinc fing ( 452) 1296 285.2 2.8e-74 gi|108999043|ref|XP_001102479.1| PREDICTED: zinc f ( 469) 1296 285.2 2.9e-74 gi|194665012|ref|XP_001789139.1| PREDICTED: simila ( 470) 1296 285.2 2.9e-74 gi|114554588|ref|XP_001165342.1| PREDICTED: zinc f ( 470) 1296 285.2 2.9e-74 gi|20141030|sp|Q9C0F3.2|ZN436_HUMAN RecName: Full= ( 470) 1296 285.2 2.9e-74 gi|149694262|ref|XP_001504280.1| PREDICTED: zinc f ( 470) 1296 285.2 2.9e-74 gi|73947795|ref|XP_853558.1| PREDICTED: similar to (1186) 1300 286.4 3.3e-74 gi|75070500|sp|Q5R5Y7.1|ZN436_PONAB RecName: Full= ( 470) 1295 285.0 3.4e-74 gi|75075042|sp|Q9XSR1.1|ZN252_CANFA RecName: Full= ( 873) 1298 285.8 3.5e-74 gi|194215235|ref|XP_001495155.2| PREDICTED: simila ( 882) 1298 285.8 3.5e-74 gi|149722036|ref|XP_001495178.1| PREDICTED: zinc f ( 403) 1292 284.3 4.7e-74 gi|73980803|ref|XP_540170.2| PREDICTED: similar to (1114) 1297 285.7 4.9e-74 gi|149757694|ref|XP_001505095.1| PREDICTED: zinc f ( 562) 1293 284.6 5.2e-74 gi|149029306|gb|EDL84573.1| zinc finger protein 18 ( 739) 1293 284.7 6.4e-74 gi|194217721|ref|XP_001503480.2| PREDICTED: simila ( 600) 1291 284.2 7.4e-74 >>gi|46577682|sp|P17036.3|ZNF3_HUMAN RecName: Full=Zinc (446 aa) initn: 3058 init1: 3058 opt: 3058 Z-score: 3515.2 bits: 659.8 E(): 4.9e-187 Smith-Waterman score: 3058; 100.000% identity (100.000% similar) in 446 aa overlap (49-494:1-446) 20 30 40 50 60 70 bm1102 KESGSASSFSFKTRFPLSLHPGDQRAPCPSMETQADLVSQEPQALLDSALPSKVPAFSDK :::::::::::::::::::::::::::::: gi|465 METQADLVSQEPQALLDSALPSKVPAFSDK 10 20 30 80 90 100 110 120 130 bm1102 DSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 DSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSL 40 50 60 70 80 90 140 150 160 170 180 190 bm1102 DRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 DRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNR 100 110 120 130 140 150 200 210 220 230 240 250 bm1102 KMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 KMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFN 160 170 180 190 200 210 260 270 280 290 300 310 bm1102 RTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 RTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSA 220 230 240 250 260 270 320 330 340 350 360 370 bm1102 LILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 LILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHH 280 290 300 310 320 330 380 390 400 410 420 430 bm1102 QRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 QRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIH 340 350 360 370 380 390 440 450 460 470 480 490 bm1102 TGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|465 TGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST 400 410 420 430 440 >>gi|55629028|ref|XP_519246.1| PREDICTED: zinc finger pr (446 aa) initn: 3054 init1: 3054 opt: 3054 Z-score: 3510.6 bits: 658.9 E(): 8.8e-187 Smith-Waterman score: 3054; 99.776% identity (100.000% similar) in 446 aa overlap (49-494:1-446) 20 30 40 50 60 70 bm1102 KESGSASSFSFKTRFPLSLHPGDQRAPCPSMETQADLVSQEPQALLDSALPSKVPAFSDK :::::::::::::::::::::::::::::: gi|556 METQADLVSQEPQALLDSALPSKVPAFSDK 10 20 30 80 90 100 110 120 130 bm1102 DSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 DSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSL 40 50 60 70 80 90 140 150 160 170 180 190 bm1102 DRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 DRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNR 100 110 120 130 140 150 200 210 220 230 240 250 bm1102 KMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 KMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFN 160 170 180 190 200 210 260 270 280 290 300 310 bm1102 RTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 RTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSA 220 230 240 250 260 270 320 330 340 350 360 370 bm1102 LILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 LILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHH 280 290 300 310 320 330 380 390 400 410 420 430 bm1102 QRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 QRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIH 340 350 360 370 380 390 440 450 460 470 480 490 bm1102 TGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST :::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|556 TGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIRDST 400 410 420 430 440 >>gi|50949598|emb|CAH10562.1| hypothetical protein [Homo (446 aa) initn: 3047 init1: 3047 opt: 3047 Z-score: 3502.6 bits: 657.4 E(): 2.5e-186 Smith-Waterman score: 3047; 99.776% identity (99.776% similar) in 446 aa overlap (49-494:1-446) 20 30 40 50 60 70 bm1102 KESGSASSFSFKTRFPLSLHPGDQRAPCPSMETQADLVSQEPQALLDSALPSKVPAFSDK :::::::::::::::::::::::::::::: gi|509 METQADLVSQEPQALLDSALPSKVPAFSDK 10 20 30 80 90 100 110 120 130 bm1102 DSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|509 DSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVSSL 40 50 60 70 80 90 140 150 160 170 180 190 bm1102 DRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 DRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLNR 100 110 120 130 140 150 200 210 220 230 240 250 bm1102 KMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 KMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSFN 160 170 180 190 200 210 260 270 280 290 300 310 bm1102 RTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 RTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSSA 220 230 240 250 260 270 320 330 340 350 360 370 bm1102 LILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 LILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHH 280 290 300 310 320 330 380 390 400 410 420 430 bm1102 QRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 QRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIH 340 350 360 370 380 390 440 450 460 470 480 490 bm1102 TGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 TGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST 400 410 420 430 440 >>gi|194218814|ref|XP_001915564.1| PREDICTED: zinc finge (447 aa) initn: 2751 init1: 2751 opt: 2856 Z-score: 3283.1 bits: 616.8 E(): 4.1e-174 Smith-Waterman score: 2856; 93.065% identity (97.763% similar) in 447 aa overlap (49-494:1-447) 20 30 40 50 60 70 bm1102 KESGSASSFSFKTRFPLSLHPGDQRAPCPSMETQADLVSQEPQALLDSALPS-KVPAFSD :::::: :::::::::.::::: :::::.. gi|194 METQADRVSQEPQALLESALPSSKVPAFAN 10 20 30 80 90 100 110 120 130 bm1102 KDSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFS ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|194 KDSLGDEMLAAALLKAKSRELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFS 40 50 60 70 80 90 140 150 160 170 180 190 bm1102 LDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLN :: :::::.:::::::: ::::::::.:::::::.::.::::.::.:: :::: ::::: gi|194 LDGETRTEHDQEISEDTGSHGVLLGRLQKDISQGFKFEEAYEQEVTLKGQLGNSSGERLN 100 110 120 130 140 150 200 210 220 230 240 250 bm1102 RKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSF ::. ::::: :::.:.::::::::::::::::::.:::.::::::::::::::::::::: gi|194 RKIQDFGQVIVEENLSPRGERSEKYNDFGNSFTVSSNLVSHQRLPVGDRPHKCDECSKSF 160 170 180 190 200 210 260 270 280 290 300 310 bm1102 NRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSS :::::::::::::::::::::.:::::::::::::::::::::::::::.:::::::::: gi|194 NRTSDLIQHQRIHTGEKPYECSECGKAFSQSSHLIQHQRIHTGEKPYECNDCGKTFSCSS 220 230 240 250 260 270 320 330 340 350 360 370 bm1102 ALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIH :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|194 ALILHRRIHTGEKPYECSECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIH 280 290 300 310 320 330 380 390 400 410 420 430 bm1102 HQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRI 340 350 360 370 380 390 440 450 460 470 480 490 bm1102 HTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST :::::::::::::::::::::::::::::::::::: .:::.::::::.:::::::: gi|194 HTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNVMGMSRSSLRVTAELNIREST 400 410 420 430 440 >>gi|30582675|gb|AAP35564.1| zinc finger protein 3 (A8-5 (410 aa) initn: 2829 init1: 2829 opt: 2829 Z-score: 3252.6 bits: 611.1 E(): 2.1e-172 Smith-Waterman score: 2829; 100.000% identity (100.000% similar) in 410 aa overlap (85-494:1-410) 60 70 80 90 100 110 bm1102 LVSQEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWK :::::::::::::::::::::::::::::: gi|305 MLAAALLKAKSQELVTFEDVAVYFIRKEWK 10 20 30 120 130 140 150 160 170 bm1102 RLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 RLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKF 40 50 60 70 80 90 180 190 200 210 220 230 bm1102 KEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 KEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSN 100 110 120 130 140 150 240 250 260 270 280 290 bm1102 LISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 LISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQH 160 170 180 190 200 210 300 310 320 330 340 350 bm1102 QRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 QRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIH 220 230 240 250 260 270 360 370 380 390 400 410 bm1102 TGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 TGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEK 280 290 300 310 320 330 420 430 440 450 460 470 bm1102 PYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 PYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNG 340 350 360 370 380 390 480 490 bm1102 IGMSKSSLRVTTELNIREST :::::::::::::::::::: gi|305 IGMSKSSLRVTTELNIREST 400 410 >>gi|30584085|gb|AAP36291.1| Homo sapiens zinc finger pr (411 aa) initn: 2829 init1: 2829 opt: 2829 Z-score: 3252.6 bits: 611.1 E(): 2.1e-172 Smith-Waterman score: 2829; 100.000% identity (100.000% similar) in 410 aa overlap (85-494:1-410) 60 70 80 90 100 110 bm1102 LVSQEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWK :::::::::::::::::::::::::::::: gi|305 MLAAALLKAKSQELVTFEDVAVYFIRKEWK 10 20 30 120 130 140 150 160 170 bm1102 RLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 RLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKF 40 50 60 70 80 90 180 190 200 210 220 230 bm1102 KEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 KEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSN 100 110 120 130 140 150 240 250 260 270 280 290 bm1102 LISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 LISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQH 160 170 180 190 200 210 300 310 320 330 340 350 bm1102 QRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 QRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIH 220 230 240 250 260 270 360 370 380 390 400 410 bm1102 TGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 TGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEK 280 290 300 310 320 330 420 430 440 450 460 470 bm1102 PYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 PYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNG 340 350 360 370 380 390 480 490 bm1102 IGMSKSSLRVTTELNIREST :::::::::::::::::::: gi|305 IGMSKSSLRVTTELNIRESTL 400 410 >>gi|189067925|dbj|BAG37863.1| unnamed protein product [ (410 aa) initn: 2824 init1: 2824 opt: 2824 Z-score: 3246.9 bits: 610.0 E(): 4.3e-172 Smith-Waterman score: 2824; 99.756% identity (100.000% similar) in 410 aa overlap (85-494:1-410) 60 70 80 90 100 110 bm1102 LVSQEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWK :::::::::::::::::::::::::::::: gi|189 MLAAALLKAKSQELVTFEDVAVYFIRKEWK 10 20 30 120 130 140 150 160 170 bm1102 RLEPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKF ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 RLKPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKF 40 50 60 70 80 90 180 190 200 210 220 230 bm1102 KEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 KEAYEREVSLKRPLGNSPGERLNRKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSN 100 110 120 130 140 150 240 250 260 270 280 290 bm1102 LISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 LISHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQH 160 170 180 190 200 210 300 310 320 330 340 350 bm1102 QRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 QRIHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIH 220 230 240 250 260 270 360 370 380 390 400 410 bm1102 TGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 TGEKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEK 280 290 300 310 320 330 420 430 440 450 460 470 bm1102 PYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 PYECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNG 340 350 360 370 380 390 480 490 bm1102 IGMSKSSLRVTTELNIREST :::::::::::::::::::: gi|189 IGMSKSSLRVTTELNIREST 400 410 >>gi|86823997|gb|AAI05477.1| Zinc finger protein 3 [Bos (447 aa) initn: 2657 init1: 2657 opt: 2762 Z-score: 3175.1 bits: 596.8 E(): 4.3e-168 Smith-Waterman score: 2762; 90.604% identity (96.197% similar) in 447 aa overlap (49-494:1-447) 20 30 40 50 60 70 bm1102 KESGSASSFSFKTRFPLSLHPGDQRAPCPSMETQADLVSQEPQALLDSALPS-KVPAFSD :::::: :::::::::.::::: : :.::: gi|868 METQADRVSQEPQALLESALPSSKGPTFSD 10 20 30 80 90 100 110 120 130 bm1102 KDSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFS : .::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|868 KGGLGDEMLAAALLKAKAQELVTFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFS 40 50 60 70 80 90 140 150 160 170 180 190 bm1102 LDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLKRPLGNSPGERLN :: ::::: :.::::: :::::::::::::::::::.::::.:::::: ::.: ::::: gi|868 LDGETRTEPDSEISEDRGSHGVLLGRFQKDISQGLKFEEAYEQEVSLKRQLGSSSGERLN 100 110 120 130 140 150 200 210 220 230 240 250 bm1102 RKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSNLISHQRLPVGDRPHKCDECSKSF ::: .::::..::. .: : :::: .:. .::::..:::::::::::::::::::::::: gi|868 RKMQEFGQVAAEEQRAPTGGRSEKCSDLRDSFTVSANLISHQRLPVGDRPHKCDECSKSF 160 170 180 190 200 210 260 270 280 290 300 310 bm1102 NRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYECSDCGKTFSCSS :::::::::::::::::::::.:::::::::::::::::::::::::::.:::::::::: gi|868 NRTSDLIQHQRIHTGEKPYECSECGKAFSQSSHLIQHQRIHTGEKPYECNDCGKTFSCSS 220 230 240 250 260 270 320 330 340 350 360 370 bm1102 ALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|868 ALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIH 280 290 300 310 320 330 380 390 400 410 420 430 bm1102 HQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|868 HQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRI 340 350 360 370 380 390 440 450 460 470 480 490 bm1102 HTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVTTELNIREST :::::::::::::::::::::::::::::::::::: .:.:::::.::.:.:::::: gi|868 HTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNVMGVSKSSLQVTAEVNIREST 400 410 420 430 440 >>gi|193787250|dbj|BAG52456.1| unnamed protein product [ (429 aa) initn: 2749 init1: 2749 opt: 2749 Z-score: 3160.5 bits: 594.1 E(): 2.8e-167 Smith-Waterman score: 2749; 99.499% identity (99.499% similar) in 399 aa overlap (96-494:31-429) 70 80 90 100 110 120 bm1102 SALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWKRLEPAQRDLYR :::::::::::::::::::::::::::::: gi|193 MCIFHPILSDFFGAAIHIPHPEIACQHVLFQELVTFEDVAVYFIRKEWKRLEPAQRDLYR 10 20 30 40 50 60 130 140 150 160 170 180 bm1102 DVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 DVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKFKEAYEREVSLK 70 80 90 100 110 120 190 200 210 220 230 240 bm1102 RPLGNSPGERLNRKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSNLISHQRLPVGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 RPLGNSPGERLNRKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSNLISHQRLPVGD 130 140 150 160 170 180 250 260 270 280 290 300 bm1102 RPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTGEKPYE :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|193 RPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQRIHTEEKPYE 190 200 210 220 230 240 310 320 330 340 350 360 bm1102 CSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNEC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 CSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNEC 250 260 270 280 290 300 370 380 390 400 410 420 bm1102 GKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKF :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|193 GKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPNECMECGGKF 310 320 330 340 350 360 430 440 450 460 470 480 bm1102 TYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 TYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIGMSKSSLRVT 370 380 390 400 410 420 490 bm1102 TELNIREST ::::::::: gi|193 TELNIREST >>gi|109066104|ref|XP_001112671.1| PREDICTED: similar to (610 aa) initn: 2731 init1: 2731 opt: 2731 Z-score: 3137.6 bits: 590.4 E(): 5.2e-166 Smith-Waterman score: 2737; 87.393% identity (91.239% similar) in 468 aa overlap (38-494:145-610) 10 20 30 40 50 60 bm1102 GLLGTDFKEGRKESGSASSFSFKTRFPLSLHPGDQRAPCPSMETQADLVSQEPQALLDSA : . :.: ::.: .:. : .. .: gi|109 PRRLPAALSQQTTERRGPPIFLDRTSGRWGHGVSPRVPGSRGETEA-VVAGEGGGVCAAA 120 130 140 150 160 170 70 80 90 100 110 bm1102 ---LPSKVPAFSDKDSLGDEMLAAALLK--------AKSQELVTFEDVAVYFIRKEWKRL .: ::. . . . : ::. : . :::::::::::::::::::: gi|109 ALRVPRPVPS-RVRGGAPPSLAARPLLRFPRDPPSLAGACELVTFEDVAVYFIRKEWKRL 180 190 200 210 220 230 120 130 140 150 160 170 bm1102 EPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKFKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EPAQRDLYRDVMLENYGNVFSLDRETRTENDQEISEDTRSHGVLLGRFQKDISQGLKFKE 240 250 260 270 280 290 180 190 200 210 220 230 bm1102 AYEREVSLKRPLGNSPGERLNRKMPDFGQVTVEEKLTPRGERSEKYNDFGNSFTVNSNLI ::::::::::::::::::::.::: ::::::::::.:: ::::::::::::::::::::: gi|109 AYEREVSLKRPLGNSPGERLTRKMQDFGQVTVEEKITPMGERSEKYNDFGNSFTVNSNLI 300 310 320 330 340 350 240 250 260 270 280 290 bm1102 SHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SHQRLPVGDRPHKCDECSKSFNRTSDLIQHQRIHTGEKPYECNECGKAFSQSSHLIQHQR 360 370 380 390 400 410 300 310 320 330 340 350 bm1102 IHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IHTGEKPYECSDCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIHTG 420 430 440 450 460 470 360 370 380 390 400 410 bm1102 EKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EKPYACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPY 480 490 500 510 520 530 420 430 440 450 460 470 bm1102 ECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGIG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|109 ECMECGGKFTYSSGLIQHQRIHTGENPYECSECGKAFRYSSALVRHQRIHTGEKPLNGMG 540 550 560 570 580 590 480 490 bm1102 MSKSSLRVTTELNIREST :::::::::::::::::: gi|109 MSKSSLRVTTELNIREST 600 610 494 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 02:28:36 2009 done: Thu Jun 18 02:31:40 2009 Total Scan time: 1131.070 Total Display time: 0.130 Function used was FASTA [version 34.26.5 April 26, 2007]