hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090416/iprscan-20090416-12353479/chunk_1/iprscan-20090416-12353479.nocrc
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Query sequence: bn02131
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00111.17.fs 2Fe-2S iron-sulfur cluster binding domain       43.8      2e-11   1
PF00111.17.ls 2Fe-2S iron-sulfur cluster binding domain       45.7    1.5e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00111.17.fs   1/1      77   161 ..     1    95 []    43.8    2e-11
PF00111.17.ls   1/1      77   161 ..     1    95 []    45.7  1.5e-10

Alignments of top-scoring domains:
PF00111.17.fs: domain 1 of 1, from 77 to 161: score 43.8, E = 2e-11
                   *->vtidGkgvtvevpdgettlLdaaeneaggidiPysCrgplpGgaCGt
                      v   G+++ v    g++ +L  a  +  g+d+  +C++     aC+t
     bn02131    77    VDRSGQRIPVSGRVGDN-VLHLAQ-RH-GVDLEGACEA---SLACST 117  

                   CkvkvveGevdlgqsdleeqselegeelaagyvlegeSrLaCqtrpts<-
                   C+v v e + dl+ +     +e e+++l+ + +l+++SrL Cq+++t   
     bn02131   118 CHVYVSEDHLDLLPPP----EEREDDMLDMAPLLQENSRLGCQIVLTP   161  

                   *
                    
     bn02131     -   -    

PF00111.17.ls: domain 1 of 1, from 77 to 161: score 45.7, E = 1.5e-10
                   *->vtidGkgvtvevpdgettlLdaaeneaggidiPysCrgplpGgaCGt
                      v   G+++ v    g++ +L  a  +  g+d+  +C++     aC+t
     bn02131    77    VDRSGQRIPVSGRVGDN-VLHLAQ-RH-GVDLEGACEA---SLACST 117  

                   CkvkvveGevdlgqsdleeqselegeelaagyvlegeSrLaCqtrpts<-
                   C+v v e + dl+ +     +e e+++l+ + +l+++SrL Cq+++t   
     bn02131   118 CHVYVSEDHLDLLPPP----EEREDDMLDMAPLLQENSRLGCQIVLTP   161  

                   *
                    
     bn02131     -   -    

//