hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-12332361/chunk_1/iprscan-20090525-12332361.nocrc
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Query sequence: bn02132
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00254.18.fs FKBP-type peptidyl-prolyl cis-trans isomeras    26.5    7.5e-07   1
PF07719.7.fs Tetratricopeptide repeat                        27.0    1.6e-06   2
PF07719.7.ls Tetratricopeptide repeat                        31.0    3.8e-06   2
PF00254.18.ls FKBP-type peptidyl-prolyl cis-trans isomeras    14.5    0.00016   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00254.18.fs   1/1      53   120 ..     1    76 [.    26.5  7.5e-07
PF00254.18.ls   1/1      53   185 ..     1   111 []    14.5  0.00016
PF07719.7.ls   2/2     295   328 ..     1    34 []    24.2  0.00044

Alignments of top-scoring domains:
PF00254.18.fs: domain 1 of 1, from 53 to 120: score 26.5, E = 7.5e-07
                   *->gdgprkpkkGDtVtvhYtGkLe.d..GtvFDsslGydekkkkkgrgk
                      g+ p   ++G ++t+hY   L +d++Gtv D+s  +        rgk
     bn02132    53    GELPD-FQDGTKATFHYRT-LHsDdeGTVLDDS--RA-------RGK 88   

                   PfeFtlGsGqVIkGwdeGllgMkvGEkrkltI<-*
                   P e+++G++  ++ w+  + +M++GE++++ +   
     bn02132    89 PMELIIGKKFKLPVWETIVCTMREGEIAQFLC    120  

PF00254.18.ls: domain 1 of 1, from 53 to 185: score 14.5, E = 0.00016
                   *->gdgprkpkkGDtVtvhYtGkLe.d..GtvFDsslGydekkkkkgrgk
                      g+ p   ++G ++t+hY   L +d++Gtv D+s  +        rgk
     bn02132    53    GELPD-FQDGTKATFHYRT-LHsDdeGTVLDDS--RA-------RGK 88   

                   PfeFtlGsGqVIkGwdeGllgMkvGEkrkltIPpelaYGeq.........
                   P e+++G++  ++ w+  + +M++GE++++ +         +    +   
     bn02132    89 PMELIIGKKFKLPVWETIVCTMREGEIAQFLCDI------Khvvlyplva 132  

                   ..........d..e.........................eGlaggvlfaI
                   ++ ++   ++d+ e++++  +  + +++++ ++ + +  +   +      
     bn02132   133 kslrniavgkDplEgqrhccgvaqmrehsslghadldalQQN-P------ 175  

                   PPnatLvFeVELl<-*
                      ++L+F  E l   
     bn02132   176 ---QPLIFHMEML    185  

PF07719.7.ls: domain 2 of 2, from 295 to 328: score 24.2, E = 0.00044
                   *->aealynlGlayyklgdyeeAleayekAleldPnn<-*
                      ++a++ +G+a+++  + +eA +++ k+leldP     
     bn02132   295    VKAYFKRGKAHAAVWNAQEAQADFAKVLELDPAL    328  

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