# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obn02138.fasta.nr -Q bn02138.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bn02138, 156 aa vs /cdna2/lib/nr/nr library 3020366983 residues in 8842601 sequences statistics sampled from 60000 to 8831766 sequences Expectation_n fit: rho(ln(x))= 5.6592+/-0.000184; mu= 3.5813+/- 0.010 mean_var=77.3353+/-15.076, 0's: 31 Z-trim: 98 B-trim: 0 in 0/67 Lambda= 0.145843 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8842601) gi|226887604|pdb|2WEL|D Chain D, Crystal Structure ( 150) 964 211.5 4.6e-53 gi|49037408|sp|P62161.2|CALM_RAT RecName: Full=Cal ( 149) 959 210.4 9.4e-53 gi|60834460|gb|AAX37095.1| calmodulin 2 [synthetic ( 150) 959 210.4 9.5e-53 gi|30583815|gb|AAP36156.1| Homo sapiens calmodulin ( 150) 959 210.4 9.5e-53 gi|90109258|pdb|2F2O|A Chain A, Structure Of Calmo ( 179) 959 210.5 1.1e-52 gi|109102865|ref|XP_001113485.1| PREDICTED: simila ( 163) 958 210.2 1.2e-52 gi|114677917|ref|XP_512771.2| PREDICTED: similar t ( 270) 960 210.8 1.3e-52 gi|109125250|ref|XP_001112409.1| PREDICTED: simila ( 163) 956 209.8 1.6e-52 gi|197129720|gb|ACH46218.1| putative calmodulin va ( 149) 955 209.6 1.7e-52 gi|115509|sp|P02594.2|CALM_ELEEL RecName: Full=Cal ( 149) 955 209.6 1.7e-52 gi|14250065|gb|AAH08437.1| Calmodulin 2 (phosphory ( 149) 955 209.6 1.7e-52 gi|12851157|dbj|BAB28959.1| unnamed protein produc ( 149) 955 209.6 1.7e-52 gi|189532998|ref|XP_001919221.1| PREDICTED: simila ( 152) 955 209.6 1.7e-52 gi|49035521|sp|Q7T3T2.3|CALM_EPIAK RecName: Full=C ( 149) 954 209.4 2e-52 gi|55730374|emb|CAH91909.1| hypothetical protein [ ( 149) 954 209.4 2e-52 gi|146741444|dbj|BAF62378.1| calmodulin 1 [Pan tro ( 149) 954 209.4 2e-52 gi|74220435|dbj|BAE31439.1| unnamed protein produc ( 149) 954 209.4 2e-52 gi|49035756|sp|Q9U6D3.3|CALM_MYXGL RecName: Full=C ( 149) 953 209.1 2.3e-52 gi|225715894|gb|ACO13793.1| Calmodulin [Esox luciu ( 149) 953 209.1 2.3e-52 gi|74225291|dbj|BAE31579.1| unnamed protein produc ( 149) 953 209.1 2.3e-52 gi|90079399|dbj|BAE89379.1| unnamed protein produc ( 149) 953 209.1 2.3e-52 gi|126282289|ref|XP_001371508.1| PREDICTED: hypoth ( 155) 953 209.2 2.3e-52 gi|71664|pir||MCON calmodulin - salmon gi|4722 ( 148) 952 208.9 2.6e-52 gi|67971250|dbj|BAE01967.1| unnamed protein produc ( 149) 952 208.9 2.6e-52 gi|74212053|dbj|BAE40191.1| unnamed protein produc ( 149) 952 208.9 2.6e-52 gi|47222683|emb|CAG00117.1| unnamed protein produc ( 149) 952 208.9 2.6e-52 gi|74219094|dbj|BAE26689.1| unnamed protein produc ( 197) 953 209.2 2.8e-52 gi|160358333|ref|NP_001103834.1| calmodulin 1 (pho ( 149) 951 208.7 3e-52 gi|469422|gb|AAA66182.1| calmodulin ( 149) 951 208.7 3e-52 gi|3415119|gb|AAC31608.1| calmodulin [Gallus gallu ( 149) 951 208.7 3e-52 gi|126329432|ref|XP_001373765.1| PREDICTED: hypoth ( 217) 953 209.2 3.1e-52 gi|109084655|ref|XP_001087048.1| PREDICTED: simila ( 209) 952 209.0 3.5e-52 gi|197129719|gb|ACH46217.1| putative calmodulin va ( 149) 950 208.5 3.5e-52 gi|56758390|gb|AAW27335.1| unknown [Schistosoma ja ( 149) 950 208.5 3.5e-52 gi|225705524|gb|ACO08608.1| Calmodulin [Oncorhynch ( 149) 950 208.5 3.5e-52 gi|74143933|dbj|BAE41271.1| unnamed protein produc ( 149) 950 208.5 3.5e-52 gi|197129747|gb|ACH46245.1| putative calmodulin va ( 149) 950 208.5 3.5e-52 gi|223647230|gb|ACN10373.1| Calmodulin [Salmo sala ( 149) 950 208.5 3.5e-52 gi|194215657|ref|XP_001500896.2| PREDICTED: simila ( 224) 952 209.0 3.7e-52 gi|119912985|ref|XP_001250669.1| PREDICTED: calmod ( 149) 949 208.3 4.1e-52 gi|197129717|gb|ACH46215.1| putative calmodulin va ( 149) 948 208.1 4.7e-52 gi|189055073|dbj|BAG38057.1| unnamed protein produ ( 149) 948 208.1 4.7e-52 gi|224983343|pdb|2K0J|A Chain A, Solution Structur ( 148) 947 207.9 5.4e-52 gi|67970752|dbj|BAE01718.1| unnamed protein produc ( 149) 947 207.9 5.4e-52 gi|122063218|sp|P21251.2|CALM_STIJA RecName: Full= ( 149) 947 207.9 5.4e-52 gi|640285|pdb|1CDL|A Chain A, Target Enzyme Recogn ( 147) 946 207.7 6.2e-52 gi|157830843|pdb|1DMO|A Chain A, Calmodulin, Nmr, ( 148) 946 207.7 6.2e-52 gi|49066052|sp|Q95NR9.3|CALM_METSE RecName: Full=C ( 149) 946 207.7 6.3e-52 gi|62738073|pdb|1UP5|A Chain A, Chicken Calmodulin ( 148) 945 207.5 7.2e-52 gi|49035757|sp|Q9UB37.3|CALM2_BRALA RecName: Full= ( 149) 945 207.5 7.3e-52 >>gi|226887604|pdb|2WEL|D Chain D, Crystal Structure Of (150 aa) initn: 964 init1: 964 opt: 964 Z-score: 1109.9 bits: 211.5 E(): 4.6e-53 Smith-Waterman score: 964; 100.000% identity (100.000% similar) in 150 aa overlap (7-156:1-150) 10 20 30 40 50 60 bn0213 ETGSACSMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 SMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 10 20 30 40 50 70 80 90 100 110 120 bn0213 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 60 70 80 90 100 110 130 140 150 bn0213 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK :::::::::::::::::::::::::::::::::::: gi|226 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 120 130 140 150 >>gi|49037408|sp|P62161.2|CALM_RAT RecName: Full=Calmodu (149 aa) initn: 959 init1: 959 opt: 959 Z-score: 1104.2 bits: 210.4 E(): 9.4e-53 Smith-Waterman score: 959; 100.000% identity (100.000% similar) in 149 aa overlap (8-156:1-149) 10 20 30 40 50 60 bn0213 ETGSACSMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 10 20 30 40 50 70 80 90 100 110 120 bn0213 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 60 70 80 90 100 110 130 140 150 bn0213 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK :::::::::::::::::::::::::::::::::::: gi|490 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 120 130 140 >>gi|60834460|gb|AAX37095.1| calmodulin 2 [synthetic con (150 aa) initn: 959 init1: 959 opt: 959 Z-score: 1104.2 bits: 210.4 E(): 9.5e-53 Smith-Waterman score: 959; 100.000% identity (100.000% similar) in 149 aa overlap (8-156:1-149) 10 20 30 40 50 60 bn0213 ETGSACSMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 10 20 30 40 50 70 80 90 100 110 120 bn0213 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 60 70 80 90 100 110 130 140 150 bn0213 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK :::::::::::::::::::::::::::::::::::: gi|608 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKD 120 130 140 150 >>gi|30583815|gb|AAP36156.1| Homo sapiens calmodulin 1 ( (150 aa) initn: 959 init1: 959 opt: 959 Z-score: 1104.2 bits: 210.4 E(): 9.5e-53 Smith-Waterman score: 959; 100.000% identity (100.000% similar) in 149 aa overlap (8-156:1-149) 10 20 30 40 50 60 bn0213 ETGSACSMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 10 20 30 40 50 70 80 90 100 110 120 bn0213 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 60 70 80 90 100 110 130 140 150 bn0213 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK :::::::::::::::::::::::::::::::::::: gi|305 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKL 120 130 140 150 >>gi|90109258|pdb|2F2O|A Chain A, Structure Of Calmoduli (179 aa) initn: 959 init1: 959 opt: 959 Z-score: 1103.1 bits: 210.5 E(): 1.1e-52 Smith-Waterman score: 959; 100.000% identity (100.000% similar) in 149 aa overlap (8-156:1-149) 10 20 30 40 50 60 bn0213 ETGSACSMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 10 20 30 40 50 70 80 90 100 110 120 bn0213 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 60 70 80 90 100 110 130 140 150 bn0213 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK :::::::::::::::::::::::::::::::::::: gi|901 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKGGGGGAAARKEVIRNKIRAIGKMA 120 130 140 150 160 170 gi|901 RVFSVL >>gi|109102865|ref|XP_001113485.1| PREDICTED: similar to (163 aa) initn: 958 init1: 958 opt: 958 Z-score: 1102.5 bits: 210.2 E(): 1.2e-52 Smith-Waterman score: 958; 97.386% identity (99.346% similar) in 153 aa overlap (4-156:11-163) 10 20 30 40 50 bn0213 ETGSACSMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE .. :.::::::::::::::::::::::::::::::::::::::::::::: gi|109 MARKRPGMPATVVSQADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 10 20 30 40 50 60 60 70 80 90 100 110 bn0213 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 70 80 90 100 110 120 120 130 140 150 bn0213 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK ::::::::::::::::::::::::::::::::::::::::::: gi|109 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 130 140 150 160 >>gi|114677917|ref|XP_512771.2| PREDICTED: similar to ca (270 aa) initn: 960 init1: 960 opt: 960 Z-score: 1101.5 bits: 210.8 E(): 1.3e-52 Smith-Waterman score: 960; 99.333% identity (100.000% similar) in 150 aa overlap (7-156:121-270) 10 20 30 bn0213 ETGSACSMADQLTEEQIAEFKEAFSLFDKDGDGTIT .::::::::::::::::::::::::::::: gi|114 GADARRSWNCCSCCRRRRNLDPRAPDTPGLAMADQLTEEQIAEFKEAFSLFDKDGDGTIT 100 110 120 130 140 150 40 50 60 70 80 90 bn0213 TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREA 160 170 180 190 200 210 100 110 120 130 140 150 bn0213 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 220 230 240 250 260 270 >>gi|109125250|ref|XP_001112409.1| PREDICTED: similar to (163 aa) initn: 956 init1: 956 opt: 956 Z-score: 1100.2 bits: 209.8 E(): 1.6e-52 Smith-Waterman score: 956; 98.667% identity (100.000% similar) in 150 aa overlap (7-156:14-163) 10 20 30 40 50 bn0213 ETGSACSMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE ..::::::::::::::::::::::::::::::::::::::::::::: gi|109 MNLDPRAPDTPGLALADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE 10 20 30 40 50 60 60 70 80 90 100 110 bn0213 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 70 80 90 100 110 120 120 130 140 150 bn0213 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK ::::::::::::::::::::::::::::::::::::::::::: gi|109 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 130 140 150 160 >>gi|197129720|gb|ACH46218.1| putative calmodulin varian (149 aa) initn: 955 init1: 955 opt: 955 Z-score: 1099.7 bits: 209.6 E(): 1.7e-52 Smith-Waterman score: 955; 99.329% identity (100.000% similar) in 149 aa overlap (8-156:1-149) 10 20 30 40 50 60 bn0213 ETGSACSMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 10 20 30 40 50 70 80 90 100 110 120 bn0213 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|197 NEVDADGNGTIDFPEFLTMMSRKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 60 70 80 90 100 110 130 140 150 bn0213 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK :::::::::::::::::::::::::::::::::::: gi|197 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 120 130 140 >>gi|115509|sp|P02594.2|CALM_ELEEL RecName: Full=Calmodu (149 aa) initn: 955 init1: 955 opt: 955 Z-score: 1099.7 bits: 209.6 E(): 1.7e-52 Smith-Waterman score: 955; 99.329% identity (100.000% similar) in 149 aa overlap (8-156:1-149) 10 20 30 40 50 60 bn0213 ETGSACSMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 10 20 30 40 50 70 80 90 100 110 120 bn0213 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|115 NEVDADGNGTIDFPEFLTMMAKKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 60 70 80 90 100 110 130 140 150 bn0213 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK :::::::::::::::::::::::::::::::::::: gi|115 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 120 130 140 156 residues in 1 query sequences 3020366983 residues in 8842601 library sequences Tcomplib [34.26] (8 proc) start: Mon May 25 12:36:36 2009 done: Mon May 25 12:40:25 2009 Total Scan time: 738.880 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]