hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-12402532/chunk_1/iprscan-20090525-12402532.nocrc
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Query sequence: bn02138
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00036.22.ls EF hand                                        169.3    8.7e-48   4
PF00036.22.fs EF hand                                        161.4    2.2e-45   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00036.22.fs   1/4      19    47 ..     1    29 []    39.8  8.3e-10
PF00036.22.ls   1/4      19    47 ..     1    29 []    41.8  2.2e-09
PF00036.22.ls   2/4      55    83 ..     1    29 []    40.6    5e-09
PF00036.22.fs   2/4      55    83 ..     1    29 []    38.6  1.8e-09
PF00036.22.fs   3/4      92   120 ..     1    29 []    41.9  2.2e-10
PF00036.22.ls   3/4      92   120 ..     1    29 []    43.9  4.9e-10
PF00036.22.ls   4/4     128   156 .]     1    29 []    43.0  9.3e-10
PF00036.22.fs   4/4     128   156 .]     1    29 []    41.0  3.9e-10

Alignments of top-scoring domains:
PF00036.22.fs: domain 1 of 4, from 19 to 47: score 39.8, E = 8.3e-10
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      e+keaF++fDkDgDG+I+ +E+ +++++l   
     bn02138    19    EFKEAFSLFDKDGDGTITTKELGTVMRSL    47   

PF00036.22.ls: domain 1 of 4, from 19 to 47: score 41.8, E = 2.2e-09
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      e+keaF++fDkDgDG+I+ +E+ +++++l   
     bn02138    19    EFKEAFSLFDKDGDGTITTKELGTVMRSL    47   

PF00036.22.ls: domain 2 of 4, from 55 to 83: score 40.6, E = 5e-09
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      el+++++e+D+Dg+G+I+f Ef+++++++   
     bn02138    55    ELQDMINEVDADGNGTIDFPEFLTMMARK    83   

PF00036.22.fs: domain 2 of 4, from 55 to 83: score 38.6, E = 1.8e-09
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      el+++++e+D+Dg+G+I+f Ef+++++++   
     bn02138    55    ELQDMINEVDADGNGTIDFPEFLTMMARK    83   

PF00036.22.fs: domain 3 of 4, from 92 to 120: score 41.9, E = 2.2e-10
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      e++eaF++fDkDg+G+Is  E+++++++l   
     bn02138    92    EIREAFRVFDKDGNGYISAAELRHVMTNL    120  

PF00036.22.ls: domain 3 of 4, from 92 to 120: score 43.9, E = 4.9e-10
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      e++eaF++fDkDg+G+Is  E+++++++l   
     bn02138    92    EIREAFRVFDKDGNGYISAAELRHVMTNL    120  

PF00036.22.ls: domain 4 of 4, from 128 to 156: score 43.0, E = 9.3e-10
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      e++e+++e+D DgDG++++eEf+++++++   
     bn02138   128    EVDEMIREADIDGDGQVNYEEFVQMMTAK    156  

PF00036.22.fs: domain 4 of 4, from 128 to 156: score 41.0, E = 3.9e-10
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      e++e+++e+D DgDG++++eEf+++++++   
     bn02138   128    EVDEMIREADIDGDGQVNYEEFVQMMTAK    156  

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