hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-02383974/chunk_1/iprscan-20090618-02383974.nocrc
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Query sequence: bn02174
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00044.14.fs Glyceraldehyde 3-phosphate dehydrogenase, NA   337.9   8.5e-136   1
PF02800.10.ls Glyceraldehyde 3-phosphate dehydrogenase, C-   383.5   2.9e-112   1
PF02800.10.fs Glyceraldehyde 3-phosphate dehydrogenase, C-   381.6   1.1e-111   1
PF00044.14.ls Glyceraldehyde 3-phosphate dehydrogenase, NA   339.8    4.2e-99   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00044.14.fs   1/1      25   173 ..     1   161 []   337.9 8.5e-136
PF00044.14.ls   1/1      25   173 ..     1   161 []   339.8  4.2e-99
PF02800.10.fs   1/1     178   335 ..     1   164 []   381.6 1.1e-111
PF02800.10.ls   1/1     178   335 ..     1   164 []   383.5 2.9e-112

Alignments of top-scoring domains:
PF00044.14.fs: domain 1 of 1, from 25 to 173: score 337.9, E = 8.5e-136
                   *->ikVgINGFGRIGRlVlRaalsgkrpdieVVAINDltgDpetlAyLLK
                      +kVg NGFGRIGRlV Raa+   + ++++VAIND+++D+++++y+++
     bn02174    25    VKVGVNGFGRIGRLVTRAAF--NSGKVDIVAINDPFIDLNYMVYMFQ 69   

                   ylYDSvHGrfdgeVevvdedgeLiVnGkkIkdvfaerdPanlPWgelGvD
                     YDS+HG+f+g+V+ +++++ L++nG++I+ +f+erdP++++Wg++G++
     bn02174    70 --YDSTHGKFHGTVK-AENGK-LVINGNPIT-IFQERDPSKIKWGDAGAE 114  

                   iViEsTGvFttkekAsaHlkapGAKKViISAPaKddeadpTfVyGVNhed
                   +V+EsTGvFtt+ekA aHl++ GAK+ViISAP++d   +p+fV+GVNhe+
     bn02174   115 YVVESTGVFTTMEKAGAHLQG-GAKRVIISAPSAD---APMFVMGVNHEK 160  

                   YdpethkivSNASC<-*
                   Yd++  ki+SNASC   
     bn02174   161 YDNSL-KIISNASC    173  

PF00044.14.ls: domain 1 of 1, from 25 to 173: score 339.8, E = 4.2e-99
                   *->ikVgINGFGRIGRlVlRaalsgkrpdieVVAINDltgDpetlAyLLK
                      +kVg NGFGRIGRlV Raa+   + ++++VAIND+++D+++++y+++
     bn02174    25    VKVGVNGFGRIGRLVTRAAF--NSGKVDIVAINDPFIDLNYMVYMFQ 69   

                   ylYDSvHGrfdgeVevvdedgeLiVnGkkIkdvfaerdPanlPWgelGvD
                     YDS+HG+f+g+V+ +++++ L++nG++I+ +f+erdP++++Wg++G++
     bn02174    70 --YDSTHGKFHGTVK-AENGK-LVINGNPIT-IFQERDPSKIKWGDAGAE 114  

                   iViEsTGvFttkekAsaHlkapGAKKViISAPaKddeadpTfVyGVNhed
                   +V+EsTGvFtt+ekA aHl++ GAK+ViISAP++d   +p+fV+GVNhe+
     bn02174   115 YVVESTGVFTTMEKAGAHLQG-GAKRVIISAPSAD---APMFVMGVNHEK 160  

                   YdpethkivSNASC<-*
                   Yd++  ki+SNASC   
     bn02174   161 YDNSL-KIISNASC    173  

PF02800.10.fs: domain 1 of 1, from 178 to 335: score 381.6, E = 1.1e-111
                   *->LAPlaKVLndkFGIeeGlMTTVHayTadQklvDgpskkHkDlRraRA
                      LAPlaKV++d+FGI+eGlMTTVHa Ta+Qk+vDgps+  k +R +R+
     bn02174   178    LAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSG--KLWRDGRG 222  

                   AaIqNIIPtsTGAAKAVglVlPeLkGKLtGmAfRVPTpdVSvvDLtvele
                   A  qNIIP+sTGAAKAVg+V+PeL+GKLtGmAfRVPT++VSvvDLt++le
     bn02174   223 AL-QNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCRLE 271  

                   kdvtveEVnaalkeAaegalkGilgYteeplVSsDfvgdphLSSifDaka
                   k+++++++++++k A+eg+lkGilgYte ++VSsDf++d+h SS+fDa+a
     bn02174   272 KPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTH-SSTFDAGA 320  

                   TivlnvggnfvKvvaWY<-*
                   +i+ln  + fvK+++WY   
     bn02174   321 GIALN--DHFVKLISWY    335  

PF02800.10.ls: domain 1 of 1, from 178 to 335: score 383.5, E = 2.9e-112
                   *->LAPlaKVLndkFGIeeGlMTTVHayTadQklvDgpskkHkDlRraRA
                      LAPlaKV++d+FGI+eGlMTTVHa Ta+Qk+vDgps+  k +R +R+
     bn02174   178    LAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSG--KLWRDGRG 222  

                   AaIqNIIPtsTGAAKAVglVlPeLkGKLtGmAfRVPTpdVSvvDLtvele
                   A  qNIIP+sTGAAKAVg+V+PeL+GKLtGmAfRVPT++VSvvDLt++le
     bn02174   223 AL-QNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCRLE 271  

                   kdvtveEVnaalkeAaegalkGilgYteeplVSsDfvgdphLSSifDaka
                   k+++++++++++k A+eg+lkGilgYte ++VSsDf++d+h SS+fDa+a
     bn02174   272 KPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTH-SSTFDAGA 320  

                   TivlnvggnfvKvvaWY<-*
                   +i+ln  + fvK+++WY   
     bn02174   321 GIALN--DHFVKLISWY    335  

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