# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obn04373.fasta.nr -Q bn04373.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bn04373, 367 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8984552 sequences Expectation_n fit: rho(ln(x))= 4.8984+/-0.000181; mu= 11.4964+/- 0.010 mean_var=65.4557+/-12.995, 0's: 26 Z-trim: 35 B-trim: 1727 in 2/67 Lambda= 0.158526 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|55976562|sp|Q92905.4|CSN5_HUMAN RecName: Full=C ( 334) 2209 513.8 2.4e-143 gi|60834645|gb|AAX37104.1| COP9 constitutive photo ( 335) 2209 513.8 2.4e-143 gi|30585175|gb|AAP36860.1| Homo sapiens COP9 const ( 335) 2209 513.8 2.4e-143 gi|57107765|ref|XP_535093.1| PREDICTED: similar to ( 334) 2208 513.6 2.8e-143 gi|76634466|ref|XP_583747.2| PREDICTED: similar to ( 334) 2208 513.6 2.8e-143 gi|126321070|ref|XP_001368118.1| PREDICTED: simila ( 334) 2206 513.1 3.8e-143 gi|55976214|sp|O35864.3|CSN5_MOUSE RecName: Full=C ( 334) 2204 512.7 5.2e-143 gi|55637143|ref|XP_522159.1| PREDICTED: similar to ( 334) 2204 512.7 5.2e-143 gi|149721341|ref|XP_001494265.1| PREDICTED: simila ( 334) 2204 512.7 5.2e-143 gi|1549383|gb|AAB16847.1| Jun activation domain bi ( 334) 2202 512.2 7.1e-143 gi|148800597|gb|ABR13016.1| COP9 constitutive phot ( 334) 2200 511.7 9.8e-143 gi|68534551|gb|AAH98736.1| COP9 constitutive photo ( 334) 2199 511.5 1.1e-142 gi|149411096|ref|XP_001512862.1| PREDICTED: simila ( 334) 2198 511.3 1.3e-142 gi|197129932|gb|ACH46430.1| putative JUN activatio ( 339) 2191 509.7 4.1e-142 gi|53130282|emb|CAG31470.1| hypothetical protein [ ( 338) 2187 508.8 7.8e-142 gi|197127681|gb|ACH44179.1| putative JUN activatio ( 339) 2184 508.1 1.3e-141 gi|2360943|gb|AAD03468.1| 38 kDa Mov34 homolog [Ho ( 334) 2171 505.1 9.7e-141 gi|55976434|sp|Q6P635.1|CSN5_XENTR RecName: Full=C ( 334) 2162 503.1 4e-140 gi|47213973|emb|CAG00664.1| unnamed protein produc ( 333) 2149 500.1 3.2e-139 gi|55976403|sp|Q6GLM9.1|CSN5_XENLA RecName: Full=C ( 332) 2142 498.5 9.6e-139 gi|225707572|gb|ACO09632.1| COP9 signalosome compl ( 334) 2136 497.1 2.5e-138 gi|55976436|sp|Q6PC30.1|CSN5_DANRE RecName: Full=C ( 334) 2135 496.9 2.9e-138 gi|197631807|gb|ACH70627.1| COP9 constitutive phot ( 334) 2123 494.1 2e-137 gi|209735124|gb|ACI68431.1| COP9 signalosome compl ( 334) 2119 493.2 3.7e-137 gi|219451838|ref|XP_002223661.1| hypothetical prot ( 333) 2015 469.4 5.3e-130 gi|119607336|gb|EAW86930.1| COP9 constitutive phot ( 379) 1891 441.1 2e-121 gi|156223730|gb|EDO44562.1| predicted protein [Nem ( 333) 1856 433.1 4.7e-119 gi|221579605|gb|ACM24339.1| JAB-MPN domain protein ( 348) 1808 422.1 9.8e-116 gi|66554147|ref|XP_623806.1| PREDICTED: similar to ( 344) 1801 420.5 3e-115 gi|91090862|ref|XP_972769.1| PREDICTED: similar to ( 344) 1800 420.3 3.5e-115 gi|198437240|ref|XP_002129245.1| PREDICTED: simila ( 386) 1799 420.1 4.4e-115 gi|156552519|ref|XP_001599567.1| PREDICTED: simila ( 366) 1796 419.4 6.9e-115 gi|114620395|ref|XP_001162463.1| PREDICTED: simila ( 270) 1781 415.9 5.8e-114 gi|109086608|ref|XP_001097650.1| PREDICTED: simila ( 268) 1769 413.1 3.9e-113 gi|73999196|ref|XP_859165.1| PREDICTED: similar to ( 258) 1722 402.3 6.5e-110 gi|62087848|dbj|BAD92371.1| COP9 signalosome subun ( 276) 1715 400.8 2.1e-109 gi|108868776|gb|EAT33001.1| jun activation domain ( 336) 1713 400.4 3.3e-109 gi|167873620|gb|EDS37003.1| COP9 signalosome compl ( 426) 1708 399.3 8.8e-109 gi|190651895|gb|EDV49150.1| GG17007 [Drosophila er ( 327) 1699 397.2 3e-108 gi|193894536|gb|EDV93402.1| GH19288 [Drosophila gr ( 327) 1697 396.7 4.1e-108 gi|194170215|gb|EDW85116.1| GK14483 [Drosophila wi ( 327) 1696 396.5 4.8e-108 gi|55976633|sp|Q9XZ58.1|CSN5_DROME RecName: Full=C ( 327) 1696 396.5 4.8e-108 gi|28317149|gb|AAD27862.2|AF132563_1 LD14392p [Dro ( 345) 1696 396.5 5e-108 gi|54639127|gb|EAL28529.1| GA13321 [Drosophila pse ( 327) 1691 395.3 1.1e-107 gi|194143096|gb|EDW59499.1| GJ10255 [Drosophila vi ( 327) 1690 395.1 1.2e-107 gi|193915267|gb|EDW14134.1| GI23503 [Drosophila mo ( 327) 1687 394.4 2e-107 gi|4732109|gb|AAD28608.1|AF129083_1 COP9 signaloso ( 327) 1685 394.0 2.8e-107 gi|115954030|ref|XP_001190460.1| PREDICTED: simila ( 287) 1671 390.7 2.3e-106 gi|115623851|ref|XP_001200311.1| PREDICTED: simila ( 285) 1663 388.9 8.1e-106 gi|194199102|gb|EDX12678.1| GD19103 [Drosophila si ( 321) 1656 387.3 2.7e-105 >>gi|55976562|sp|Q92905.4|CSN5_HUMAN RecName: Full=COP9 (334 aa) initn: 2209 init1: 2209 opt: 2209 Z-score: 2731.0 bits: 513.8 E(): 2.4e-143 Smith-Waterman score: 2209; 100.000% identity (100.000% similar) in 334 aa overlap (34-367:1-334) 10 20 30 40 50 60 bn0437 VRRVKAHTRKPSEVKLRLGCRDDNFSASSAMAASGSGMAQKTWELANNMQEAQSIDEIYK :::::::::::::::::::::::::::::: gi|559 MAASGSGMAQKTWELANNMQEAQSIDEIYK 10 20 30 70 80 90 100 110 120 bn0437 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 40 50 60 70 80 90 130 140 150 160 170 180 bn0437 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI 100 110 120 130 140 150 190 200 210 220 230 240 bn0437 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK 160 170 180 190 200 210 250 260 270 280 290 300 bn0437 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS 220 230 240 250 260 270 310 320 330 340 350 360 bn0437 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ 280 290 300 310 320 330 bn0437 INIS :::: gi|559 INIS >>gi|60834645|gb|AAX37104.1| COP9 constitutive photomorp (335 aa) initn: 2209 init1: 2209 opt: 2209 Z-score: 2731.0 bits: 513.8 E(): 2.4e-143 Smith-Waterman score: 2209; 100.000% identity (100.000% similar) in 334 aa overlap (34-367:1-334) 10 20 30 40 50 60 bn0437 VRRVKAHTRKPSEVKLRLGCRDDNFSASSAMAASGSGMAQKTWELANNMQEAQSIDEIYK :::::::::::::::::::::::::::::: gi|608 MAASGSGMAQKTWELANNMQEAQSIDEIYK 10 20 30 70 80 90 100 110 120 bn0437 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 40 50 60 70 80 90 130 140 150 160 170 180 bn0437 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI 100 110 120 130 140 150 190 200 210 220 230 240 bn0437 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK 160 170 180 190 200 210 250 260 270 280 290 300 bn0437 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS 220 230 240 250 260 270 310 320 330 340 350 360 bn0437 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ 280 290 300 310 320 330 bn0437 INIS :::: gi|608 INISD >>gi|30585175|gb|AAP36860.1| Homo sapiens COP9 constitut (335 aa) initn: 2209 init1: 2209 opt: 2209 Z-score: 2731.0 bits: 513.8 E(): 2.4e-143 Smith-Waterman score: 2209; 100.000% identity (100.000% similar) in 334 aa overlap (34-367:1-334) 10 20 30 40 50 60 bn0437 VRRVKAHTRKPSEVKLRLGCRDDNFSASSAMAASGSGMAQKTWELANNMQEAQSIDEIYK :::::::::::::::::::::::::::::: gi|305 MAASGSGMAQKTWELANNMQEAQSIDEIYK 10 20 30 70 80 90 100 110 120 bn0437 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 40 50 60 70 80 90 130 140 150 160 170 180 bn0437 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI 100 110 120 130 140 150 190 200 210 220 230 240 bn0437 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK 160 170 180 190 200 210 250 260 270 280 290 300 bn0437 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS 220 230 240 250 260 270 310 320 330 340 350 360 bn0437 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ 280 290 300 310 320 330 bn0437 INIS :::: gi|305 INISL >>gi|57107765|ref|XP_535093.1| PREDICTED: similar to COP (334 aa) initn: 2208 init1: 2208 opt: 2208 Z-score: 2729.7 bits: 513.6 E(): 2.8e-143 Smith-Waterman score: 2208; 99.701% identity (100.000% similar) in 334 aa overlap (34-367:1-334) 10 20 30 40 50 60 bn0437 VRRVKAHTRKPSEVKLRLGCRDDNFSASSAMAASGSGMAQKTWELANNMQEAQSIDEIYK :::::::::::::::::::::::::::::: gi|571 MAASGSGMAQKTWELANNMQEAQSIDEIYK 10 20 30 70 80 90 100 110 120 bn0437 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|571 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 40 50 60 70 80 90 130 140 150 160 170 180 bn0437 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|571 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI 100 110 120 130 140 150 190 200 210 220 230 240 bn0437 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|571 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK 160 170 180 190 200 210 250 260 270 280 290 300 bn0437 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|571 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS 220 230 240 250 260 270 310 320 330 340 350 360 bn0437 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|571 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ 280 290 300 310 320 330 bn0437 INIS ::.: gi|571 INVS >>gi|76634466|ref|XP_583747.2| PREDICTED: similar to COP (334 aa) initn: 2208 init1: 2208 opt: 2208 Z-score: 2729.7 bits: 513.6 E(): 2.8e-143 Smith-Waterman score: 2208; 99.701% identity (100.000% similar) in 334 aa overlap (34-367:1-334) 10 20 30 40 50 60 bn0437 VRRVKAHTRKPSEVKLRLGCRDDNFSASSAMAASGSGMAQKTWELANNMQEAQSIDEIYK ::::::::::::::::::::::::.::::: gi|766 MAASGSGMAQKTWELANNMQEAQSVDEIYK 10 20 30 70 80 90 100 110 120 bn0437 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 40 50 60 70 80 90 130 140 150 160 170 180 bn0437 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI 100 110 120 130 140 150 190 200 210 220 230 240 bn0437 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK 160 170 180 190 200 210 250 260 270 280 290 300 bn0437 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS 220 230 240 250 260 270 310 320 330 340 350 360 bn0437 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ 280 290 300 310 320 330 bn0437 INIS :::: gi|766 INIS >>gi|126321070|ref|XP_001368118.1| PREDICTED: similar to (334 aa) initn: 2206 init1: 2206 opt: 2206 Z-score: 2727.3 bits: 513.1 E(): 3.8e-143 Smith-Waterman score: 2206; 99.701% identity (100.000% similar) in 334 aa overlap (34-367:1-334) 10 20 30 40 50 60 bn0437 VRRVKAHTRKPSEVKLRLGCRDDNFSASSAMAASGSGMAQKTWELANNMQEAQSIDEIYK :::::::::::.:::::::::::::::::: gi|126 MAASGSGMAQKSWELANNMQEAQSIDEIYK 10 20 30 70 80 90 100 110 120 bn0437 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 40 50 60 70 80 90 130 140 150 160 170 180 bn0437 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI 100 110 120 130 140 150 190 200 210 220 230 240 bn0437 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK 160 170 180 190 200 210 250 260 270 280 290 300 bn0437 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS 220 230 240 250 260 270 310 320 330 340 350 360 bn0437 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ 280 290 300 310 320 330 bn0437 INIS :::: gi|126 INIS >>gi|55976214|sp|O35864.3|CSN5_MOUSE RecName: Full=COP9 (334 aa) initn: 2204 init1: 2204 opt: 2204 Z-score: 2724.8 bits: 512.7 E(): 5.2e-143 Smith-Waterman score: 2204; 99.401% identity (100.000% similar) in 334 aa overlap (34-367:1-334) 10 20 30 40 50 60 bn0437 VRRVKAHTRKPSEVKLRLGCRDDNFSASSAMAASGSGMAQKTWELANNMQEAQSIDEIYK :::::::::::::::::::::::::::::: gi|559 MAASGSGMAQKTWELANNMQEAQSIDEIYK 10 20 30 70 80 90 100 110 120 bn0437 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 40 50 60 70 80 90 130 140 150 160 170 180 bn0437 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI 100 110 120 130 140 150 190 200 210 220 230 240 bn0437 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK 160 170 180 190 200 210 250 260 270 280 290 300 bn0437 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS 220 230 240 250 260 270 310 320 330 340 350 360 bn0437 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ 280 290 300 310 320 330 bn0437 INIS ::.. gi|559 INVA >>gi|55637143|ref|XP_522159.1| PREDICTED: similar to COP (334 aa) initn: 2204 init1: 2204 opt: 2204 Z-score: 2724.8 bits: 512.7 E(): 5.2e-143 Smith-Waterman score: 2204; 99.701% identity (100.000% similar) in 334 aa overlap (34-367:1-334) 10 20 30 40 50 60 bn0437 VRRVKAHTRKPSEVKLRLGCRDDNFSASSAMAASGSGMAQKTWELANNMQEAQSIDEIYK :.:::::::::::::::::::::::::::: gi|556 MVASGSGMAQKTWELANNMQEAQSIDEIYK 10 20 30 70 80 90 100 110 120 bn0437 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 40 50 60 70 80 90 130 140 150 160 170 180 bn0437 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI 100 110 120 130 140 150 190 200 210 220 230 240 bn0437 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK 160 170 180 190 200 210 250 260 270 280 290 300 bn0437 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS 220 230 240 250 260 270 310 320 330 340 350 360 bn0437 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ 280 290 300 310 320 330 bn0437 INIS :::: gi|556 INIS >>gi|149721341|ref|XP_001494265.1| PREDICTED: similar to (334 aa) initn: 2204 init1: 2204 opt: 2204 Z-score: 2724.8 bits: 512.7 E(): 5.2e-143 Smith-Waterman score: 2204; 99.701% identity (100.000% similar) in 334 aa overlap (34-367:1-334) 10 20 30 40 50 60 bn0437 VRRVKAHTRKPSEVKLRLGCRDDNFSASSAMAASGSGMAQKTWELANNMQEAQSIDEIYK :.:::::::::::::::::::::::::::: gi|149 MTASGSGMAQKTWELANNMQEAQSIDEIYK 10 20 30 70 80 90 100 110 120 bn0437 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 40 50 60 70 80 90 130 140 150 160 170 180 bn0437 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI 100 110 120 130 140 150 190 200 210 220 230 240 bn0437 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK 160 170 180 190 200 210 250 260 270 280 290 300 bn0437 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS 220 230 240 250 260 270 310 320 330 340 350 360 bn0437 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ 280 290 300 310 320 330 bn0437 INIS :::: gi|149 INIS >>gi|1549383|gb|AAB16847.1| Jun activation domain bindin (334 aa) initn: 2202 init1: 2202 opt: 2202 Z-score: 2722.3 bits: 512.2 E(): 7.1e-143 Smith-Waterman score: 2202; 99.701% identity (100.000% similar) in 334 aa overlap (34-367:1-334) 10 20 30 40 50 60 bn0437 VRRVKAHTRKPSEVKLRLGCRDDNFSASSAMAASGSGMAQKTWELANNMQEAQSIDEIYK :::::::::::::::::::::::::::::: gi|154 MAASGSGMAQKTWELANNMQEAQSIDEIYK 10 20 30 70 80 90 100 110 120 bn0437 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|154 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 40 50 60 70 80 90 130 140 150 160 170 180 bn0437 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|154 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGHLENAIGWYHSHPGYGCWLSGI 100 110 120 130 140 150 190 200 210 220 230 240 bn0437 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|154 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNK 160 170 180 190 200 210 250 260 270 280 290 300 bn0437 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|154 IEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLS 220 230 240 250 260 270 310 320 330 340 350 360 bn0437 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|154 EKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQ 280 290 300 310 320 330 bn0437 INIS :::: gi|154 INIS 367 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 03:01:47 2009 done: Thu Jun 18 03:05:06 2009 Total Scan time: 1047.050 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]