hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-03050773/chunk_1/iprscan-20090618-03050773.nocrc
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Query sequence: bn04373
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01398.11.ls Mov34/MPN/PAD-1 family                         172.3    1.2e-48   1
PF01398.11.fs Mov34/MPN/PAD-1 family                         170.3    4.6e-48   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01398.11.fs   1/1      83   197 ..     1   120 []   170.3  4.6e-48
PF01398.11.ls   1/1      83   197 ..     1   120 []   172.3  1.2e-48

Alignments of top-scoring domains:
PF01398.11.fs: domain 1 of 1, from 83 to 197: score 170.3, E = 4.6e-48
                   *->ssvrtVvihplVllkivdharrggkskeevmGvLlGtlegdgrviei
                      ++++  +i++l+llk+v har+gg+   evmG++lG+++g+  +  i
     bn04373    83    HYFKYCKISALALLKMVMHARSGGNL--EVMGLMLGKVDGE--TMII 125  

                   tnsFalPqeeteddveaveldqeYmekmlemlkkvngrpeevVGWYHshp
                   ++sFalP+e+te++v+a++ ++eYm +++e  k+v gr e+ +GWYHshp
     bn04373   126 MDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV-GRLENAIGWYHSHP 174  

                   glgcwlsavDvhthelyqryipe<-*
                   g+gcwls++Dv t++l+q+++++   
     bn04373   175 GYGCWLSGIDVSTQMLNQQFQEP    197  

PF01398.11.ls: domain 1 of 1, from 83 to 197: score 172.3, E = 1.2e-48
                   *->ssvrtVvihplVllkivdharrggkskeevmGvLlGtlegdgrviei
                      ++++  +i++l+llk+v har+gg+   evmG++lG+++g+  +  i
     bn04373    83    HYFKYCKISALALLKMVMHARSGGNL--EVMGLMLGKVDGE--TMII 125  

                   tnsFalPqeeteddveaveldqeYmekmlemlkkvngrpeevVGWYHshp
                   ++sFalP+e+te++v+a++ ++eYm +++e  k+v gr e+ +GWYHshp
     bn04373   126 MDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV-GRLENAIGWYHSHP 174  

                   glgcwlsavDvhthelyqryipe<-*
                   g+gcwls++Dv t++l+q+++++   
     bn04373   175 GYGCWLSGIDVSTQMLNQQFQEP    197  

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