hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-03113755/chunk_1/iprscan-20090618-03113755.nocrc
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Query sequence: bn04723
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF03366.6.ls YEATS family                                   161.1    2.6e-45   1
PF03366.6.fs YEATS family                                   159.2      1e-44   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF03366.6.fs   1/1      87   169 ..     1    87 []   159.2    1e-44
PF03366.6.ls   1/1      87   169 ..     1    87 []   161.1  2.6e-45

Alignments of top-scoring domains:
PF03366.6.fs: domain 1 of 1, from 87 to 169: score 159.2, E = 1e-44
                   *->THkWtvyVrgldgedkEpiskfVkKVtFkLHeSFanpkRvvtePPFe
                      TH+WtvyV+++ +ed   +s +VkK++FkLHeS+ np+Rvvt+PP+e
     bn04723    87    THQWTVYVKPYRNED---MSAYVKKIQFKLHESYGNPLRVVTKPPYE 130  

                   itEtGWGEFeirIkiffrndsnekkvsisHdLvLdqddyt<-*
                   itEtGWGEFei Ikiff+ d+ne++v+++H L+L+q+d     
     bn04723   131 ITETGWGEFEIIIKIFFI-DPNERPVTLYHLLKLFQSDTN    169  

PF03366.6.ls: domain 1 of 1, from 87 to 169: score 161.1, E = 2.6e-45
                   *->THkWtvyVrgldgedkEpiskfVkKVtFkLHeSFanpkRvvtePPFe
                      TH+WtvyV+++ +ed   +s +VkK++FkLHeS+ np+Rvvt+PP+e
     bn04723    87    THQWTVYVKPYRNED---MSAYVKKIQFKLHESYGNPLRVVTKPPYE 130  

                   itEtGWGEFeirIkiffrndsnekkvsisHdLvLdqddyt<-*
                   itEtGWGEFei Ikiff+ d+ne++v+++H L+L+q+d     
     bn04723   131 ITETGWGEFEIIIKIFFI-DPNERPVTLYHLLKLFQSDTN    169  

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