hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-02263384/chunk_1/iprscan-20080808-02263384.nocrc
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Query sequence: ee00796
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02893.10.ls GRAM domain                                    100.0    6.5e-27   1
PF02893.10.fs GRAM domain                                     98.2      1e-26   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02893.10.fs   1/1     110   177 ..     1    82 []    98.2    1e-26
PF02893.10.ls   1/1     110   177 ..     1    82 []   100.0  6.5e-27

Alignments of top-scoring domains:
PF02893.10.fs: domain 1 of 1, from 110 to 177: score 98.2, E = 1e-26
                   *->ekfrkiFkeilppeEkLiadckaeVysCplqrpfskipvqGrlYltn
                      e+frk F+  lp+ E+Li d     ysC+lqr   +i++qGrlYl++
     ee00796   110    EDFRKLFS-KLPEAERLIVD-----YSCALQR---EILLQGRLYLSE 147  

                   nrlcFrSdklgdltkegvyklviPladiervekes<-*
                   n++cF+S++++++t     ++ i l++++ ++ke+   
     ee00796   148 NWICFYSNIFRWET-----TISIQLKEVTCLKKEK    177  

PF02893.10.ls: domain 1 of 1, from 110 to 177: score 100.0, E = 6.5e-27
                   *->ekfrkiFkeilppeEkLiadckaeVysCplqrpfskipvqGrlYltn
                      e+frk F+  lp+ E+Li d     ysC+lqr   +i++qGrlYl++
     ee00796   110    EDFRKLFS-KLPEAERLIVD-----YSCALQR---EILLQGRLYLSE 147  

                   nrlcFrSdklgdltkegvyklviPladiervekes<-*
                   n++cF+S++++++t     ++ i l++++ ++ke+   
     ee00796   148 NWICFYSNIFRWET-----TISIQLKEVTCLKKEK    177  

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