# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oee02696.fasta.nr -Q ee02696.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ee02696, 467 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6793907 sequences Expectation_n fit: rho(ln(x))= 5.9369+/-0.000209; mu= 8.6441+/- 0.012 mean_var=134.2595+/-25.205, 0's: 32 Z-trim: 119 B-trim: 156 in 1/65 Lambda= 0.110688 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|114673422|ref|XP_512156.2| PREDICTED: collagen ( 754) 3267 533.3 6.9e-149 gi|109122348|ref|XP_001090495.1| PREDICTED: simila ( 655) 3196 521.9 1.6e-145 gi|74738220|sp|Q6UXH8|CCBE1_HUMAN Collagen and cal ( 406) 2959 483.8 3e-134 gi|148677723|gb|EDL09670.1| collagen and calcium b ( 435) 2753 450.9 2.5e-124 gi|148677724|gb|EDL09671.1| collagen and calcium b ( 441) 2734 447.9 2e-123 gi|26330464|dbj|BAC28962.1| unnamed protein produc ( 408) 2699 442.3 9.3e-122 gi|26390553|dbj|BAC25916.1| unnamed protein produc ( 408) 2693 441.3 1.8e-121 gi|123780779|sp|Q3MI99|CCBE1_MOUSE Collagen and ca ( 408) 2685 440.1 4.4e-121 gi|149064505|gb|EDM14708.1| rCG46976, isoform CRA_ ( 464) 2675 438.5 1.4e-120 gi|109507481|ref|XP_001065428.1| PREDICTED: simila ( 568) 2675 438.6 1.7e-120 gi|149064504|gb|EDM14707.1| rCG46976, isoform CRA_ ( 408) 2669 437.5 2.6e-120 gi|73945928|ref|XP_852585.1| PREDICTED: similar to ( 393) 2306 379.5 7.1e-103 gi|194034601|ref|XP_001925807.1| PREDICTED: simila ( 349) 2295 377.7 2.2e-102 gi|109506721|ref|XP_341625.3| PREDICTED: similar t ( 399) 2247 370.1 4.9e-100 gi|148677721|gb|EDL09668.1| collagen and calcium b ( 321) 1981 327.5 2.6e-87 gi|189530311|ref|XP_001923108.1| PREDICTED: hypoth ( 401) 1896 314.1 3.7e-83 gi|159155668|gb|AAI54644.1| LOC555629 protein [Dan ( 418) 1896 314.1 3.8e-83 gi|28302161|gb|AAH46645.1| CCBE1 protein [Homo sap ( 215) 1557 259.6 4.8e-67 gi|47219888|emb|CAF97158.1| unnamed protein produc ( 320) 1548 258.4 1.7e-66 gi|26352668|dbj|BAC39964.1| unnamed protein produc ( 243) 1455 243.4 4.2e-62 gi|149543673|ref|XP_001517255.1| PREDICTED: hypoth ( 227) 1379 231.2 1.8e-58 gi|47220921|emb|CAG03128.1| unnamed protein produc ( 306) 1288 216.8 5.2e-54 gi|149064503|gb|EDM14706.1| rCG46976, isoform CRA_ ( 240) 1208 203.9 3.1e-50 gi|34365093|emb|CAE45902.1| hypothetical protein [ ( 135) 732 127.6 1.6e-27 gi|91076498|ref|XP_973054.1| PREDICTED: similar to ( 809) 626 111.6 6.6e-22 gi|148677720|gb|EDL09667.1| collagen and calcium b ( 126) 475 86.6 3.5e-15 gi|109506672|ref|XP_225862.4| PREDICTED: similar t ( 78) 425 78.3 6.5e-13 gi|168196766|gb|ACA18713.1| Collagen triple helix ( 344) 364 69.3 1.5e-09 gi|88174614|gb|ABD39382.1| putative galectin prote ( 290) 362 68.9 1.6e-09 gi|7378657|emb|CAB85466.1| putative cuticular coll ( 280) 359 68.4 2.2e-09 gi|62666698|ref|XP_343779.2| PREDICTED: similar to (1691) 369 70.9 2.4e-09 gi|158602500|gb|EDP38915.1| Nematode cuticle colla ( 283) 358 68.3 2.5e-09 gi|2746786|gb|AAB94952.1| Collagen protein 68 [Cae ( 329) 358 68.4 2.8e-09 gi|48994844|gb|AAT48109.1| mutant collagen alpha 1 ( 491) 356 68.2 4.5e-09 gi|148682812|gb|EDL14759.1| procollagen, type IV, ( 842) 359 69.0 4.6e-09 gi|169154444|emb|CAQ14993.1| novel protein similar ( 711) 357 68.6 5.1e-09 gi|149030137|gb|EDL85214.1| collagen, type IV, alp ( 842) 358 68.8 5.1e-09 gi|187029823|emb|CAP31033.1| C. briggsae CBR-COL-5 ( 359) 352 67.4 5.7e-09 gi|211610|gb|AAA48703.1| novel collagen protein (1146) 358 69.0 6.3e-09 gi|74004974|ref|XP_535998.2| PREDICTED: similar to (1480) 357 68.9 8.3e-09 gi|158602864|gb|EDP39079.1| Nematode cuticle colla ( 301) 346 66.4 9.9e-09 gi|118093225|ref|XP_421846.2| PREDICTED: similar t (1527) 355 68.6 1.1e-08 gi|149020546|gb|EDL78351.1| procollagen, type V, a (1051) 352 68.0 1.2e-08 gi|157013496|gb|EAA00623.4| AGAP011620-PA [Anophel (1065) 352 68.0 1.2e-08 gi|148693182|gb|EDL25129.1| procollagen, type V, a (1053) 351 67.8 1.3e-08 gi|15777923|dbj|BAB68504.1| adipocyte-specific pro (1053) 351 67.8 1.3e-08 gi|123122921|emb|CAM20992.1| procollagen type IV a ( 799) 349 67.4 1.3e-08 gi|26348681|dbj|BAC37980.1| unnamed protein produc ( 799) 349 67.4 1.3e-08 gi|1184072|gb|AAC47437.1| COL-1 ( 309) 343 65.9 1.4e-08 gi|158597951|gb|EDP35960.1| Nematode cuticle colla ( 303) 342 65.8 1.5e-08 >>gi|114673422|ref|XP_512156.2| PREDICTED: collagen and (754 aa) initn: 3264 init1: 3264 opt: 3267 Z-score: 2828.1 bits: 533.3 E(): 6.9e-149 Smith-Waterman score: 3267; 98.678% identity (99.339% similar) in 454 aa overlap (14-467:301-754) 10 20 30 40 ee0269 TSRRDNLNLRALTPAGHRRWCKRPCSPAPPAGKREGGGGRGGA : . ::::::::::::::::::::::::: gi|114 VPPLPASLLGLHPIPQLLASFSPQPHNIPDPCSPCRWCKRPCSPAPPAGKREGGGGRGGA 280 290 300 310 320 330 50 60 70 80 90 100 ee0269 GRLVRTELGAGKKPGASLMVPPPPSRGGAARGQLGRSLGPLLLLLALGHTWTYREEPEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GRLVRTELGAGKKPGASLMVPPPPSRGGAARGQLGRSLGPLLLLLALGHTWTYREEPEDG 340 350 360 370 380 390 110 120 130 140 150 160 ee0269 DREICSESKIATTKYPCLKSSGELTTCYRKKCCKGYKFVLGQCIPEDYDVCAEAPCEQQC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DREICSESKIATTKYPCLKSSGELTTCYRKKCCKGYKFVLGQCIPEDYDVCAEAPCEQQC 400 410 420 430 440 450 170 180 190 200 210 220 ee0269 TDNFGRVLCTCYPGYRYDRERHRKREKPYCLDIDECASSNGTLCAHICINTLGSYRCECR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TDNFGRVLCTCYPGYRYDRERHRKREKPYCLDIDECASSNGTLCAHICINTLGSYRCECR 460 470 480 490 500 510 230 240 250 260 270 280 ee0269 EGYIREDDGKTCTRGDKYPNDTGHEKSENMVKAGTCCATCKEFYQMKQTVLQLKQKIALL ::::.::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|114 EGYIQEDDGKTCTRGDKYPNDTGHEKSENVVKAGTCCATCKEFYQMKQTVLQLKQKIALL 520 530 540 550 560 570 290 300 310 320 330 340 ee0269 PNNAADLGKYITGDKVLASNTYLPGPPGLPGGQGPPGSPGPKGSPGFPGMPGPPGQPGPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PNNAADLGKYITGDKVLASNTYLPGPPGLPGGQGPPGSPGPKGSPGFPGMPGPPGQPGPR 580 590 600 610 620 630 350 360 370 380 390 400 ee0269 GSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGSPGPPGSFDFLLLML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGSPGPPGSFDFLLLML 640 650 660 670 680 690 410 420 430 440 450 460 ee0269 ADIRNDITELQEKVFGHRTHSSAEEFPLPQEFPSYPEAMDLGSGDDHPRRTETRDLRAPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ADIRNDITELQEKVFGHRTHSSAEEFPLPQEFPSYPEAMDLGSGDDHPRRTETRDLRAPR 700 710 720 730 740 750 ee0269 DFYP :::: gi|114 DFYP >>gi|109122348|ref|XP_001090495.1| PREDICTED: similar to (655 aa) initn: 3072 init1: 3072 opt: 3196 Z-score: 2767.6 bits: 521.9 E(): 1.6e-145 Smith-Waterman score: 3196; 97.550% identity (98.886% similar) in 449 aa overlap (19-467:208-655) 10 20 30 40 ee0269 TSRRDNLNLRALTPAGHRRWCKRPCSPAPPAGKREGGGGRGGAGRLVR :::::::::::::::::::: :::::: . gi|109 PPLPASLLAPQLLALFSPQPHNIPDLCSPCRWCKRPCSPAPPAGKREGGG-RGGAGRGAG 180 190 200 210 220 230 50 60 70 80 90 100 ee0269 TELGAGKKPGASLMVPPPPSRGGAARGQLGRSLGPLLLLLALGHTWTYREEPEDGDREIC ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TELGSGKKPGASLMVPPPPSRGGAARGQLGRSLGPLLLLLALGHTWTYREEPEDGDREIC 240 250 260 270 280 290 110 120 130 140 150 160 ee0269 SESKIATTKYPCLKSSGELTTCYRKKCCKGYKFVLGQCIPEDYDVCAEAPCEQQCTDNFG :::::::::::::: .:::::::::::::::::::::::::::::::::::::::::::: gi|109 SESKIATTKYPCLKPTGELTTCYRKKCCKGYKFVLGQCIPEDYDVCAEAPCEQQCTDNFG 300 310 320 330 340 350 170 180 190 200 210 220 ee0269 RVLCTCYPGYRYDRERHRKREKPYCLDIDECASSNGTLCAHICINTLGSYRCECREGYIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|109 RVLCTCYPGYRYDRERHRKREKPYCLDIDECASSNGTLCAHICINTLGSYRCECREGYIQ 360 370 380 390 400 410 230 240 250 260 270 280 ee0269 EDDGKTCTRGDKYPNDTGHEKSENMVKAGTCCATCKEFYQMKQTVLQLKQKIALLPNNAA ::::::::.::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|109 EDDGKTCTKGDKYPNDTGHEKSENAVKAGTCCATCKEFYQMKQTVLQLKQKIALLPNNAA 420 430 440 450 460 470 290 300 310 320 330 340 ee0269 DLGKYITGDKVLASNTYLPGPPGLPGGQGPPGSPGPKGSPGFPGMPGPPGQPGPRGSMGP :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|109 DLGKYITGDKVLASNAYLPGPPGLPGGQGPPGSPGPKGSPGFPGMPGPPGQPGPRGSMGP 480 490 500 510 520 530 350 360 370 380 390 400 ee0269 MGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGSPGPPGSFDFLLLMLADIRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGSPGPPGSFDFLLLMLADIRN 540 550 560 570 580 590 410 420 430 440 450 460 ee0269 DITELQEKVFGHRTHSSAEEFPLPQEFPSYPEAMDLGSGDDHPRRTETRDLRAPRDFYP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DITELQEKVFGHRTHSSAEEFPLPQEFPSYPEAMDLGSGDDHPRRTETRDLRAPRDFYP 600 610 620 630 640 650 >>gi|74738220|sp|Q6UXH8|CCBE1_HUMAN Collagen and calcium (406 aa) initn: 2959 init1: 2959 opt: 2959 Z-score: 2565.5 bits: 483.8 E(): 3e-134 Smith-Waterman score: 2959; 100.000% identity (100.000% similar) in 406 aa overlap (62-467:1-406) 40 50 60 70 80 90 ee0269 GKREGGGGRGGAGRLVRTELGAGKKPGASLMVPPPPSRGGAARGQLGRSLGPLLLLLALG :::::::::::::::::::::::::::::: gi|747 MVPPPPSRGGAARGQLGRSLGPLLLLLALG 10 20 30 100 110 120 130 140 150 ee0269 HTWTYREEPEDGDREICSESKIATTKYPCLKSSGELTTCYRKKCCKGYKFVLGQCIPEDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 HTWTYREEPEDGDREICSESKIATTKYPCLKSSGELTTCYRKKCCKGYKFVLGQCIPEDY 40 50 60 70 80 90 160 170 180 190 200 210 ee0269 DVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRKREKPYCLDIDECASSNGTLCAHIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 DVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRKREKPYCLDIDECASSNGTLCAHIC 100 110 120 130 140 150 220 230 240 250 260 270 ee0269 INTLGSYRCECREGYIREDDGKTCTRGDKYPNDTGHEKSENMVKAGTCCATCKEFYQMKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 INTLGSYRCECREGYIREDDGKTCTRGDKYPNDTGHEKSENMVKAGTCCATCKEFYQMKQ 160 170 180 190 200 210 280 290 300 310 320 330 ee0269 TVLQLKQKIALLPNNAADLGKYITGDKVLASNTYLPGPPGLPGGQGPPGSPGPKGSPGFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 TVLQLKQKIALLPNNAADLGKYITGDKVLASNTYLPGPPGLPGGQGPPGSPGPKGSPGFP 220 230 240 250 260 270 340 350 360 370 380 390 ee0269 GMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGSPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 GMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGSPG 280 290 300 310 320 330 400 410 420 430 440 450 ee0269 PPGSFDFLLLMLADIRNDITELQEKVFGHRTHSSAEEFPLPQEFPSYPEAMDLGSGDDHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 PPGSFDFLLLMLADIRNDITELQEKVFGHRTHSSAEEFPLPQEFPSYPEAMDLGSGDDHP 340 350 360 370 380 390 460 ee0269 RRTETRDLRAPRDFYP :::::::::::::::: gi|747 RRTETRDLRAPRDFYP 400 >>gi|148677723|gb|EDL09670.1| collagen and calcium bindi (435 aa) initn: 1515 init1: 1444 opt: 2753 Z-score: 2387.3 bits: 450.9 E(): 2.5e-124 Smith-Waterman score: 2753; 87.126% identity (94.713% similar) in 435 aa overlap (36-467:1-435) 10 20 30 40 50 60 ee0269 NLNLRALTPAGHRRWCKRPCSPAPPAGKREGGGGRGGAGRLVRTEL-GAGKKPGASLMVP :: :::.. .. : :: ::: :: ::: gi|148 GGCGRGASLGTAQGESSGAEKKPRASPMVP 10 20 30 70 80 90 100 110 120 ee0269 PP-PSRGGAARGQLGRSLGPLLLLLALGHTWTYREEPEDGDREICSESKIATTKYPCLKS :: :::::::. :::.::::::::::::::::::::::: :::.:::.::.::::::::: gi|148 PPLPSRGGAAKRQLGKSLGPLLLLLALGHTWTYREEPEDRDREVCSENKITTTKYPCLKS 40 50 60 70 80 90 130 140 150 160 170 180 ee0269 SGELTTCYRKKCCKGYKFVLGQCIPEDYDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRE :::::::.:::::::::::::::::::::.::.::::::::::::::::::::::::::: gi|148 SGELTTCFRKKCCKGYKFVLGQCIPEDYDICAQAPCEQQCTDNFGRVLCTCYPGYRYDRE 100 110 120 130 140 150 190 200 210 220 230 240 ee0269 RHRKREKPYCLDIDECASSNGTLCAHICINTLGSYRCECREGYIREDDGKTCTRGDKYPN ::.:::.::::::::::.:: ::::::::::.:::.:::::::: ::::.:::::::::: gi|148 RHQKRERPYCLDIDECATSNTTLCAHICINTMGSYHCECREGYILEDDGRTCTRGDKYPN 160 170 180 190 200 210 250 260 270 280 290 300 ee0269 DTGHE-KSENMVKAGTCCATCKEFYQMKQTVLQLKQKIALLPNNAADLGKYITGDKVLAS ::::: :::: ::::::::::::: ::::::::::::.::::::::.::::..::::::: gi|148 DTGHEEKSENEVKAGTCCATCKEFSQMKQTVLQLKQKMALLPNNAAELGKYVNGDKVLAS 220 230 240 250 260 270 310 320 330 340 350 360 ee0269 NTYLPGPPGLPGGQGPPGSPGPKGSPGFPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGR :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NAYLPGPPGLPGGQGPPGSPGPKGSPGFPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGR 280 290 300 310 320 330 370 380 390 400 410 420 ee0269 RGPVGPPGAPGRDGSKGERGAPGPRGSPGPPGSFDFLLLMLADIRNDITELQEKVFGHRT :::::::::::: ::::::::::: ::::::::::::::.::::::::.::::::::::: gi|148 RGPVGPPGAPGRHGSKGERGAPGPPGSPGPPGSFDFLLLVLADIRNDIAELQEKVFGHRT 340 350 360 370 380 390 430 440 450 460 ee0269 HSSAEEFPLPQEFPSYPEAMDLGSGDDHPRRTETRDLRAPRDFYP :::::.::::::: ::::..:.:::::. ::::.:: .:::.::: gi|148 HSSAEDFPLPQEFSSYPETLDFGSGDDYSRRTEARDPEAPRNFYP 400 410 420 430 >>gi|148677724|gb|EDL09671.1| collagen and calcium bindi (441 aa) initn: 1515 init1: 1444 opt: 2734 Z-score: 2370.9 bits: 447.9 E(): 2e-123 Smith-Waterman score: 2734; 89.234% identity (96.172% similar) in 418 aa overlap (52-467:24-441) 30 40 50 60 70 80 ee0269 KRPCSPAPPAGKREGGGGRGGAGRLVRTELGAGKKPGASLMVPPP-PSRGGAARGQLGRS :: ::: :: ::::: :::::::. :::.: gi|148 MGNTAKWRTERNKHTIFSKGESSGAEKKPRASPMVPPPLPSRGGAAKRQLGKS 10 20 30 40 50 90 100 110 120 130 140 ee0269 LGPLLLLLALGHTWTYREEPEDGDREICSESKIATTKYPCLKSSGELTTCYRKKCCKGYK :::::::::::::::::::::: :::.:::.::.::::::::::::::::.::::::::: gi|148 LGPLLLLLALGHTWTYREEPEDRDREVCSENKITTTKYPCLKSSGELTTCFRKKCCKGYK 60 70 80 90 100 110 150 160 170 180 190 200 ee0269 FVLGQCIPEDYDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRKREKPYCLDIDECA ::::::::::::.::.:::::::::::::::::::::::::::::.:::.:::::::::: gi|148 FVLGQCIPEDYDICAQAPCEQQCTDNFGRVLCTCYPGYRYDRERHQKRERPYCLDIDECA 120 130 140 150 160 170 210 220 230 240 250 ee0269 SSNGTLCAHICINTLGSYRCECREGYIREDDGKTCTRGDKYPNDTGHE-KSENMVKAGTC .:: ::::::::::.:::.:::::::: ::::.::::::::::::::: :::: :::::: gi|148 TSNTTLCAHICINTMGSYHCECREGYILEDDGRTCTRGDKYPNDTGHEEKSENEVKAGTC 180 190 200 210 220 230 260 270 280 290 300 310 ee0269 CATCKEFYQMKQTVLQLKQKIALLPNNAADLGKYITGDKVLASNTYLPGPPGLPGGQGPP ::::::: ::::::::::::.::::::::.::::..::::::::.::::::::::::::: gi|148 CATCKEFSQMKQTVLQLKQKMALLPNNAAELGKYVNGDKVLASNAYLPGPPGLPGGQGPP 240 250 260 270 280 290 320 330 340 350 360 370 ee0269 GSPGPKGSPGFPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|148 GSPGPKGSPGFPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRHGSKG 300 310 320 330 340 350 380 390 400 410 420 430 ee0269 ERGAPGPRGSPGPPGSFDFLLLMLADIRNDITELQEKVFGHRTHSSAEEFPLPQEFPSYP ::::::: ::::::::::::::.::::::::.::::::::::::::::.::::::: ::: gi|148 ERGAPGPPGSPGPPGSFDFLLLVLADIRNDIAELQEKVFGHRTHSSAEDFPLPQEFSSYP 360 370 380 390 400 410 440 450 460 ee0269 EAMDLGSGDDHPRRTETRDLRAPRDFYP :..:.:::::. ::::.:: .:::.::: gi|148 ETLDFGSGDDYSRRTEARDPEAPRNFYP 420 430 440 >>gi|26330464|dbj|BAC28962.1| unnamed protein product [M (408 aa) initn: 1513 init1: 1444 opt: 2699 Z-score: 2341.1 bits: 442.3 E(): 9.3e-122 Smith-Waterman score: 2699; 89.706% identity (96.814% similar) in 408 aa overlap (62-467:1-408) 40 50 60 70 80 90 ee0269 GKREGGGGRGGAGRLVRTELGAGKKPGASLMVPPP-PSRGGAARGQLGRSLGPLLLLLAL ::::: :::::::. :::.::::::::::: gi|263 MVPPPLPSRGGAAKRQLGKSLGPLLLLLAL 10 20 30 100 110 120 130 140 150 ee0269 GHTWTYREEPEDGDREICSESKIATTKYPCLKSSGELTTCYRKKCCKGYKFVLGQCIPED :::::::::::: :::.:::.::.::::::::::::::::.::::::::::::::::::: gi|263 GHTWTYREEPEDRDREVCSENKITTTKYPCLKSSGELTTCFRKKCCKGYKFVLGQCIPED 40 50 60 70 80 90 160 170 180 190 200 210 ee0269 YDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRKREKPYCLDIDECASSNGTLCAHI ::.::.:::::::::::::::::::::::::::::.:::.::::::::::.:: :::::: gi|263 YDICAQAPCEQQCTDNFGRVLCTCYPGYRYDRERHQKRERPYCLDIDECATSNTTLCAHI 100 110 120 130 140 150 220 230 240 250 260 ee0269 CINTLGSYRCECREGYIREDDGKTCTRGDKYPNDTGHE-KSENMVKAGTCCATCKEFYQM ::::.:::.:::::::: ::::.::::::::::::::: :::: ::::::::::::: :: gi|263 CINTMGSYHCECREGYILEDDGRTCTRGDKYPNDTGHEEKSENEVKAGTCCATCKEFSQM 160 170 180 190 200 210 270 280 290 300 310 320 ee0269 KQTVLQLKQKIALLPNNAADLGKYITGDKVLASNTYLPGPPGLPGGQGPPGSPGPKGSPG ::::::::::.::::::::.::::..::::::::.::::::::::::::::::::::::: gi|263 KQTVLQLKQKMALLPNNAAELGKYVNGDKVLASNAYLPGPPGLPGGQGPPGSPGPKGSPG 220 230 240 250 260 270 330 340 350 360 370 380 ee0269 FPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGS ::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: :: gi|263 FPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRHGSKGERGAPGPPGS 280 290 300 310 320 330 390 400 410 420 430 440 ee0269 PGPPGSFDFLLLMLADIRNDITELQEKVFGHRTHSSAEEFPLPQEFPSYPEAMDLGSGDD ::::::::::::.::::::::.::::::::::::::::.::::::: ::::..:.::::: gi|263 PGPPGSFDFLLLVLADIRNDIAELQEKVFGHRTHSSAEDFPLPQEFSSYPETLDFGSGDD 340 350 360 370 380 390 450 460 ee0269 HPRRTETRDLRAPRDFYP . ::::.:: .:::.::: gi|263 YSRRTEARDPEAPRNFYP 400 >>gi|26390553|dbj|BAC25916.1| unnamed protein product [M (408 aa) initn: 1515 init1: 1438 opt: 2693 Z-score: 2335.9 bits: 441.3 E(): 1.8e-121 Smith-Waterman score: 2693; 89.461% identity (96.814% similar) in 408 aa overlap (62-467:1-408) 40 50 60 70 80 90 ee0269 GKREGGGGRGGAGRLVRTELGAGKKPGASLMVPPP-PSRGGAARGQLGRSLGPLLLLLAL ::::: :::::::. :::.::::::::::: gi|263 MVPPPLPSRGGAAKRQLGKSLGPLLLLLAL 10 20 30 100 110 120 130 140 150 ee0269 GHTWTYREEPEDGDREICSESKIATTKYPCLKSSGELTTCYRKKCCKGYKFVLGQCIPED :::::::::::: :::.:::.::.::::::::::::::::.::::::::::::::::::: gi|263 GHTWTYREEPEDRDREVCSENKITTTKYPCLKSSGELTTCFRKKCCKGYKFVLGQCIPED 40 50 60 70 80 90 160 170 180 190 200 210 ee0269 YDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRKREKPYCLDIDECASSNGTLCAHI ::.::.:::::::::::::::::::::::::::::.:::.::::::::::.:: :::::: gi|263 YDICAQAPCEQQCTDNFGRVLCTCYPGYRYDRERHQKRERPYCLDIDECATSNTTLCAHI 100 110 120 130 140 150 220 230 240 250 260 ee0269 CINTLGSYRCECREGYIREDDGKTCTRGDKYPNDTGHE-KSENMVKAGTCCATCKEFYQM ::::.:::.:::::::: ::::.::::::::::::::: :::: ::::::::::::: :: gi|263 CINTMGSYHCECREGYILEDDGRTCTRGDKYPNDTGHEEKSENEVKAGTCCATCKEFSQM 160 170 180 190 200 210 270 280 290 300 310 320 ee0269 KQTVLQLKQKIALLPNNAADLGKYITGDKVLASNTYLPGPPGLPGGQGPPGSPGPKGSPG ::::::::::.::::::::.::::..::::::::.::::::::::::::::::::::::: gi|263 KQTVLQLKQKMALLPNNAAELGKYVNGDKVLASNAYLPGPPGLPGGQGPPGSPGPKGSPG 220 230 240 250 260 270 330 340 350 360 370 380 ee0269 FPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGS :::::::::::::.::::::::::::::::::::::::::::::: ::::::::::: :: gi|263 FPGMPGPPGQPGPQGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRHGSKGERGAPGPPGS 280 290 300 310 320 330 390 400 410 420 430 440 ee0269 PGPPGSFDFLLLMLADIRNDITELQEKVFGHRTHSSAEEFPLPQEFPSYPEAMDLGSGDD ::::::::::::.::::::::.::::::::::::::::.::::::: ::::..:.::::: gi|263 PGPPGSFDFLLLVLADIRNDIAELQEKVFGHRTHSSAEDFPLPQEFSSYPETLDFGSGDD 340 350 360 370 380 390 450 460 ee0269 HPRRTETRDLRAPRDFYP . ::::.:: .:::.::: gi|263 YSRRTEARDPEAPRNFYP 400 >>gi|123780779|sp|Q3MI99|CCBE1_MOUSE Collagen and calciu (408 aa) initn: 1517 init1: 1430 opt: 2685 Z-score: 2329.0 bits: 440.1 E(): 4.4e-121 Smith-Waterman score: 2685; 89.461% identity (96.569% similar) in 408 aa overlap (62-467:1-408) 40 50 60 70 80 90 ee0269 GKREGGGGRGGAGRLVRTELGAGKKPGASLMVPPP-PSRGGAARGQLGRSLGPLLLLLAL ::::: :::::::. :::.::::::::::: gi|123 MVPPPLPSRGGAAKRQLGKSLGPLLLLLAL 10 20 30 100 110 120 130 140 150 ee0269 GHTWTYREEPEDGDREICSESKIATTKYPCLKSSGELTTCYRKKCCKGYKFVLGQCIPED :::::::::::: :::.:::.::.::::::::::::::::.::::::::::::::::::: gi|123 GHTWTYREEPEDRDREVCSENKITTTKYPCLKSSGELTTCFRKKCCKGYKFVLGQCIPED 40 50 60 70 80 90 160 170 180 190 200 210 ee0269 YDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRKREKPYCLDIDECASSNGTLCAHI ::.::.:::::::::::::::::::::::::::::.:::.::::::::::.:: :::::: gi|123 YDICAQAPCEQQCTDNFGRVLCTCYPGYRYDRERHQKRERPYCLDIDECATSNTTLCAHI 100 110 120 130 140 150 220 230 240 250 260 ee0269 CINTLGSYRCECREGYIREDDGKTCTRGDKYPNDTGHE-KSENMVKAGTCCATCKEFYQM ::::.:::.:::::::: ::::.::::::::::::::: :::: ::::::::::::: :: gi|123 CINTMGSYHCECREGYILEDDGRTCTRGDKYPNDTGHEEKSENEVKAGTCCATCKEFSQM 160 170 180 190 200 210 270 280 290 300 310 320 ee0269 KQTVLQLKQKIALLPNNAADLGKYITGDKVLASNTYLPGPPGLPGGQGPPGSPGPKGSPG ::::::::::.::::::::.::::..::::::::.::::::::::::::::::::::::: gi|123 KQTVLQLKQKMALLPNNAAELGKYVNGDKVLASNAYLPGPPGLPGGQGPPGSPGPKGSPG 220 230 240 250 260 270 330 340 350 360 370 380 ee0269 FPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGS :::::: :::::::::::::::::::::::::::::::::::::: ::::::::::: :: gi|123 FPGMPGLPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRHGSKGERGAPGPPGS 280 290 300 310 320 330 390 400 410 420 430 440 ee0269 PGPPGSFDFLLLMLADIRNDITELQEKVFGHRTHSSAEEFPLPQEFPSYPEAMDLGSGDD ::::::::::::.::::::::.::::::::::::::::.::::::: ::::..:.::::: gi|123 PGPPGSFDFLLLVLADIRNDIAELQEKVFGHRTHSSAEDFPLPQEFSSYPETLDFGSGDD 340 350 360 370 380 390 450 460 ee0269 HPRRTETRDLRAPRDFYP . ::::.:: .:::.::: gi|123 YSRRTEARDPEAPRNFYP 400 >>gi|149064505|gb|EDM14708.1| rCG46976, isoform CRA_c [R (464 aa) initn: 1532 init1: 1435 opt: 2675 Z-score: 2319.7 bits: 438.5 E(): 1.4e-120 Smith-Waterman score: 2675; 88.321% identity (95.864% similar) in 411 aa overlap (59-467:54-464) 30 40 50 60 70 80 ee0269 PPAGKREGGGGRGGAGRLVRTELGAGKKPGASLMVPPPP-SRGGAARGQLGRSLGPLLLL :: :::: : :::::..::::.:::::::: gi|149 YGNTAKCVLKEASTQFSPRERARVPRRSRRASPMVPPLPLSRGGAVKGQLGKSLGPLLLL 30 40 50 60 70 80 90 100 110 120 130 140 ee0269 LALGHTWTYREEPEDGDREICSESKIATTKYPCLKSSGELTTCYRKKCCKGYKFVLGQCI ::::::::.:::::: :::.:::.::.::::::::::::::::.:::::::::::::::: gi|149 LALGHTWTFREEPEDRDREVCSENKITTTKYPCLKSSGELTTCFRKKCCKGYKFVLGQCI 90 100 110 120 130 140 150 160 170 180 190 200 ee0269 PEDYDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRKREKPYCLDIDECASSNGTLC :::::.::.:::::::::::::::::::::::::::::.::::::::::::::..: ::: gi|149 PEDYDICAQAPCEQQCTDNFGRVLCTCYPGYRYDRERHQKREKPYCLDIDECATGNTTLC 150 160 170 180 190 200 210 220 230 240 250 260 ee0269 AHICINTLGSYRCECREGYIREDDGKTCTRGDKYPNDTGHE-KSENMVKAGTCCATCKEF :: :.::.:::.:::::::: ::::.::::::::::::::: :::: ::::::::::::: gi|149 AHTCVNTMGSYHCECREGYILEDDGRTCTRGDKYPNDTGHEEKSENEVKAGTCCATCKEF 210 220 230 240 250 260 270 280 290 300 310 320 ee0269 YQMKQTVLQLKQKIALLPNNAADLGKYITGDKVLASNTYLPGPPGLPGGQGPPGSPGPKG :::::::::::::.:::::::.::::..::::::::::::::::::::::::::::::: gi|149 SQMKQTVLQLKQKISLLPNNAAELGKYVNGDKVLASNTYLPGPPGLPGGQGPPGSPGPKG 270 280 290 300 310 320 330 340 350 360 370 380 ee0269 SPGFPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGP :::::::::::::::::::::::::::::::::::::::::::::::: : ::::::::: gi|149 SPGFPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRHGLKGERGAPGP 330 340 350 360 370 380 390 400 410 420 430 440 ee0269 RGSPGPPGSFDFLLLMLADIRNDITELQEKVFGHRTHSSAEEFPLPQEFPSYPEAMDLGS ::::::::::::::.::::::::.:::::::::: :::::.::::::: ::::..:.:: gi|149 PGSPGPPGSFDFLLLVLADIRNDIAELQEKVFGHRIHSSAEDFPLPQEFSSYPETLDFGS 390 400 410 420 430 440 450 460 ee0269 GDDHPRRTETRDLRAPRDFYP :::. ::::.:: .:::.::: gi|149 GDDYSRRTEARDSEAPRNFYP 450 460 >>gi|109507481|ref|XP_001065428.1| PREDICTED: similar to (568 aa) initn: 1532 init1: 1435 opt: 2675 Z-score: 2318.7 bits: 438.6 E(): 1.7e-120 Smith-Waterman score: 2675; 88.321% identity (95.864% similar) in 411 aa overlap (59-467:158-568) 30 40 50 60 70 80 ee0269 PPAGKREGGGGRGGAGRLVRTELGAGKKPGASLMVPPPP-SRGGAARGQLGRSLGPLLLL :: :::: : :::::..::::.:::::::: gi|109 CWREGKAAAAAEPPRAQRRERARVPRRSRRASPMVPPLPLSRGGAVKGQLGKSLGPLLLL 130 140 150 160 170 180 90 100 110 120 130 140 ee0269 LALGHTWTYREEPEDGDREICSESKIATTKYPCLKSSGELTTCYRKKCCKGYKFVLGQCI ::::::::.:::::: :::.:::.::.::::::::::::::::.:::::::::::::::: gi|109 LALGHTWTFREEPEDRDREVCSENKITTTKYPCLKSSGELTTCFRKKCCKGYKFVLGQCI 190 200 210 220 230 240 150 160 170 180 190 200 ee0269 PEDYDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRKREKPYCLDIDECASSNGTLC :::::.::.:::::::::::::::::::::::::::::.::::::::::::::..: ::: gi|109 PEDYDICAQAPCEQQCTDNFGRVLCTCYPGYRYDRERHQKREKPYCLDIDECATGNTTLC 250 260 270 280 290 300 210 220 230 240 250 260 ee0269 AHICINTLGSYRCECREGYIREDDGKTCTRGDKYPNDTGHE-KSENMVKAGTCCATCKEF :: :.::.:::.:::::::: ::::.::::::::::::::: :::: ::::::::::::: gi|109 AHTCVNTMGSYHCECREGYILEDDGRTCTRGDKYPNDTGHEEKSENEVKAGTCCATCKEF 310 320 330 340 350 360 270 280 290 300 310 320 ee0269 YQMKQTVLQLKQKIALLPNNAADLGKYITGDKVLASNTYLPGPPGLPGGQGPPGSPGPKG :::::::::::::.:::::::.::::..::::::::::::::::::::::::::::::: gi|109 SQMKQTVLQLKQKISLLPNNAAELGKYVNGDKVLASNTYLPGPPGLPGGQGPPGSPGPKG 370 380 390 400 410 420 330 340 350 360 370 380 ee0269 SPGFPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGP :::::::::::::::::::::::::::::::::::::::::::::::: : ::::::::: gi|109 SPGFPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRHGLKGERGAPGP 430 440 450 460 470 480 390 400 410 420 430 440 ee0269 RGSPGPPGSFDFLLLMLADIRNDITELQEKVFGHRTHSSAEEFPLPQEFPSYPEAMDLGS ::::::::::::::.::::::::.:::::::::: :::::.::::::: ::::..:.:: gi|109 PGSPGPPGSFDFLLLVLADIRNDIAELQEKVFGHRIHSSAEDFPLPQEFSSYPETLDFGS 490 500 510 520 530 540 450 460 ee0269 GDDHPRRTETRDLRAPRDFYP :::. ::::.:: .:::.::: gi|109 GDDYSRRTEARDSEAPRNFYP 550 560 467 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Fri Aug 8 02:37:19 2008 done: Fri Aug 8 02:39:41 2008 Total Scan time: 849.120 Total Display time: 0.130 Function used was FASTA [version 34.26.5 April 26, 2007]