# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oee03811.fasta.nr -Q ee03811.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ee03811, 503 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8985079 sequences Expectation_n fit: rho(ln(x))= 5.4972+/-0.000187; mu= 10.1274+/- 0.010 mean_var=76.5840+/-15.117, 0's: 29 Z-trim: 29 B-trim: 2921 in 1/65 Lambda= 0.146557 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|90109928|sp|Q13506.2|NAB1_HUMAN RecName: Full=N ( 487) 3199 685.8 8e-195 gi|158258324|dbj|BAF85135.1| unnamed protein produ ( 487) 3194 684.7 1.7e-194 gi|109100401|ref|XP_001082352.1| PREDICTED: simila ( 487) 3194 684.7 1.7e-194 gi|119631268|gb|EAX10863.1| NGFI-A binding protein ( 486) 3180 681.8 1.3e-193 gi|1197669|gb|AAC50588.1| NAB1 ( 486) 3174 680.5 3.1e-193 gi|55729640|emb|CAH91549.1| hypothetical protein [ ( 485) 3133 671.8 1.3e-190 gi|154425656|gb|AAI51356.1| NAB1 protein [Bos taur ( 487) 3088 662.3 9.2e-188 gi|10720094|sp|O35589.1|NAB1_MESAU RecName: Full=N ( 485) 2952 633.6 4.2e-179 gi|915282|gb|AAC52236.1| NAB1 gi|12408308|ref| ( 570) 2950 633.2 6.4e-179 gi|13542862|gb|AAH05627.1| Ngfi-A binding protein ( 486) 2948 632.7 7.5e-179 gi|10720098|sp|Q61122.1|NAB1_MOUSE RecName: Full=N ( 486) 2943 631.7 1.6e-178 gi|10720105|sp|Q62722.2|NAB1_RAT RecName: Full=NGF ( 485) 2925 627.9 2.2e-177 gi|74005088|ref|XP_545569.2| PREDICTED: similar to ( 608) 2759 592.8 9.6e-167 gi|224055893|ref|XP_002194865.1| PREDICTED: NGFI-A ( 499) 2536 545.6 1.3e-152 gi|224055889|ref|XP_002194836.1| PREDICTED: NGFI-A ( 498) 2518 541.8 1.8e-151 gi|19067950|gb|AAK62474.1| Ngfi-A binding protein ( 499) 2517 541.6 2.1e-151 gi|126326434|ref|XP_001369483.1| PREDICTED: simila ( 497) 2265 488.3 2.3e-135 gi|119631270|gb|EAX10865.1| NGFI-A binding protein ( 457) 2195 473.5 6e-131 gi|109100415|ref|XP_001082099.1| PREDICTED: simila ( 458) 2194 473.3 7e-131 gi|3282825|gb|AAC25086.1| transcriptional regulato ( 458) 2194 473.3 7e-131 gi|163915822|gb|AAI57730.1| LOC100137690 protein [ ( 497) 2130 459.8 8.9e-127 gi|194222413|ref|XP_001502089.2| PREDICTED: NGFI-A ( 456) 2100 453.4 6.7e-125 gi|119631269|gb|EAX10864.1| NGFI-A binding protein ( 352) 2077 448.5 1.6e-123 gi|169641790|gb|AAI60386.1| LOC100145272 protein [ ( 455) 1882 407.3 5e-111 gi|169154881|emb|CAQ14463.1| novel protein similar ( 500) 1697 368.2 3.2e-99 gi|47218573|emb|CAG10272.1| unnamed protein produc ( 342) 1090 239.8 1e-60 gi|94733812|emb|CAK11452.1| novel protein similar ( 486) 912 202.2 2.9e-49 gi|178847417|pdb|2YUF|A Chain A, Solution Structur ( 142) 826 183.7 3.2e-44 gi|194383234|dbj|BAG59173.1| unnamed protein produ ( 227) 819 182.4 1.3e-43 gi|157017926|gb|EAA07728.5| AGAP002814-PA [Anophel ( 580) 810 180.7 1e-42 gi|115920203|ref|XP_783495.2| PREDICTED: similar t ( 686) 740 166.0 3.4e-38 gi|3372534|gb|AAC28325.1| transcriptional represso ( 103) 676 151.9 8.8e-35 gi|212517427|gb|EEB19327.1| conserved hypothetical ( 511) 679 153.0 2.1e-34 gi|10720113|sp|Q61127.1|NAB2_MOUSE RecName: Full=N ( 525) 636 143.9 1.1e-31 gi|194037570|ref|XP_001929520.1| PREDICTED: simila ( 525) 636 143.9 1.1e-31 gi|119617393|gb|EAW96987.1| NGFI-A binding protein ( 241) 628 142.0 2e-31 gi|194212288|ref|XP_001488520.2| PREDICTED: simila ( 523) 632 143.0 2e-31 gi|121484093|gb|ABM54381.1| NAB2 [Pan paniscus] ( 425) 630 142.6 2.3e-31 gi|92096639|gb|AAI14715.1| NGFI-A binding protein ( 525) 631 142.8 2.4e-31 gi|119617394|gb|EAW96988.1| NGFI-A binding protein ( 461) 630 142.6 2.5e-31 gi|109097372|ref|XP_001115736.1| PREDICTED: NGFI-A ( 461) 630 142.6 2.5e-31 gi|12643729|sp|Q15742.1|NAB2_HUMAN RecName: Full=N ( 525) 630 142.6 2.8e-31 gi|109097368|ref|XP_001115747.1| PREDICTED: NGFI-A ( 525) 630 142.6 2.8e-31 gi|209418020|gb|ACI46548.1| LP22227p [Drosophila m ( 599) 626 141.8 5.5e-31 gi|122058459|sp|Q59E55.2|NAB_DROME RecName: Full=N ( 660) 626 141.8 6e-31 gi|74207015|dbj|BAE33295.1| unnamed protein produc ( 342) 620 140.4 8.4e-31 gi|73968458|ref|XP_538243.2| PREDICTED: similar to ( 525) 622 140.9 8.9e-31 gi|121223196|gb|ABM47716.1| NAB2 [Saguinus labiatu ( 291) 618 139.9 9.9e-31 gi|194179752|gb|EDW93363.1| GE20644 [Drosophila ya ( 632) 622 141.0 1e-30 gi|122935049|gb|ABM68288.1| NAB2 [Lagothrix lagotr ( 308) 618 139.9 1e-30 >>gi|90109928|sp|Q13506.2|NAB1_HUMAN RecName: Full=NGFI- (487 aa) initn: 3199 init1: 3199 opt: 3199 Z-score: 3655.0 bits: 685.8 E(): 8e-195 Smith-Waterman score: 3199; 100.000% identity (100.000% similar) in 487 aa overlap (17-503:1-487) 10 20 30 40 50 60 ee0381 VFTFFFFFGRLNPSRVMAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA :::::::::::::::::::::::::::::::::::::::::::: gi|901 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA 10 20 30 40 70 80 90 100 110 120 ee0381 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP 50 60 70 80 90 100 130 140 150 160 170 180 ee0381 TWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 TWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH 110 120 130 140 150 160 190 200 210 220 230 240 ee0381 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT 170 180 190 200 210 220 250 260 270 280 290 300 ee0381 NKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 NKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC 230 240 250 260 270 280 310 320 330 340 350 360 ee0381 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS 290 300 310 320 330 340 370 380 390 400 410 420 ee0381 VQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 VQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSE 350 360 370 380 390 400 430 440 450 460 470 480 ee0381 EHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 EHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGIL 410 420 430 440 450 460 490 500 ee0381 KDYPHSAFTLEKKVIKTEPEDSR ::::::::::::::::::::::: gi|901 KDYPHSAFTLEKKVIKTEPEDSR 470 480 >>gi|158258324|dbj|BAF85135.1| unnamed protein product [ (487 aa) initn: 3194 init1: 3194 opt: 3194 Z-score: 3649.3 bits: 684.7 E(): 1.7e-194 Smith-Waterman score: 3194; 99.795% identity (100.000% similar) in 487 aa overlap (17-503:1-487) 10 20 30 40 50 60 ee0381 VFTFFFFFGRLNPSRVMAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA :::::::::::::::::::::::::::::::::::::::::::: gi|158 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA 10 20 30 40 70 80 90 100 110 120 ee0381 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP 50 60 70 80 90 100 130 140 150 160 170 180 ee0381 TWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 TWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH 110 120 130 140 150 160 190 200 210 220 230 240 ee0381 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT 170 180 190 200 210 220 250 260 270 280 290 300 ee0381 NKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 NKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC 230 240 250 260 270 280 310 320 330 340 350 360 ee0381 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS 290 300 310 320 330 340 370 380 390 400 410 420 ee0381 VQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 VQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSE 350 360 370 380 390 400 430 440 450 460 470 480 ee0381 EHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 EHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGIL 410 420 430 440 450 460 490 500 ee0381 KDYPHSAFTLEKKVIKTEPEDSR ::::::::::::::::.:::::: gi|158 KDYPHSAFTLEKKVIKAEPEDSR 470 480 >>gi|109100401|ref|XP_001082352.1| PREDICTED: similar to (487 aa) initn: 3194 init1: 3194 opt: 3194 Z-score: 3649.3 bits: 684.7 E(): 1.7e-194 Smith-Waterman score: 3194; 99.795% identity (100.000% similar) in 487 aa overlap (17-503:1-487) 10 20 30 40 50 60 ee0381 VFTFFFFFGRLNPSRVMAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA :::::::::::::::::::::::::::::::::::::::::::: gi|109 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA 10 20 30 40 70 80 90 100 110 120 ee0381 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP 50 60 70 80 90 100 130 140 150 160 170 180 ee0381 TWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH 110 120 130 140 150 160 190 200 210 220 230 240 ee0381 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT 170 180 190 200 210 220 250 260 270 280 290 300 ee0381 NKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC 230 240 250 260 270 280 310 320 330 340 350 360 ee0381 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS 290 300 310 320 330 340 370 380 390 400 410 420 ee0381 VQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|109 VQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQGSE 350 360 370 380 390 400 430 440 450 460 470 480 ee0381 EHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGIL 410 420 430 440 450 460 490 500 ee0381 KDYPHSAFTLEKKVIKTEPEDSR ::::::::::::::::::::::: gi|109 KDYPHSAFTLEKKVIKTEPEDSR 470 480 >>gi|119631268|gb|EAX10863.1| NGFI-A binding protein 1 ( (486 aa) initn: 2382 init1: 2382 opt: 3180 Z-score: 3633.3 bits: 681.8 E(): 1.3e-193 Smith-Waterman score: 3180; 99.795% identity (99.795% similar) in 487 aa overlap (17-503:1-486) 10 20 30 40 50 60 ee0381 VFTFFFFFGRLNPSRVMAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA :::::::::::::::::::::::::::::::::::::::::::: gi|119 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA 10 20 30 40 70 80 90 100 110 120 ee0381 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP 50 60 70 80 90 100 130 140 150 160 170 180 ee0381 TWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH 110 120 130 140 150 160 190 200 210 220 230 240 ee0381 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT 170 180 190 200 210 220 250 260 270 280 290 300 ee0381 NKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC 230 240 250 260 270 280 310 320 330 340 350 360 ee0381 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS 290 300 310 320 330 340 370 380 390 400 410 420 ee0381 VQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSE ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|119 VQTLFQQARAKSEELAALSSQ-PEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSE 350 360 370 380 390 400 430 440 450 460 470 480 ee0381 EHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGIL 410 420 430 440 450 460 490 500 ee0381 KDYPHSAFTLEKKVIKTEPEDSR ::::::::::::::::::::::: gi|119 KDYPHSAFTLEKKVIKTEPEDSR 470 480 >>gi|1197669|gb|AAC50588.1| NAB1 (486 aa) initn: 2376 init1: 2376 opt: 3174 Z-score: 3626.5 bits: 680.5 E(): 3.1e-193 Smith-Waterman score: 3174; 99.589% identity (99.795% similar) in 487 aa overlap (17-503:1-486) 10 20 30 40 50 60 ee0381 VFTFFFFFGRLNPSRVMAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA :::::::::::::::::::::::::::::::::::::::::::: gi|119 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA 10 20 30 40 70 80 90 100 110 120 ee0381 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP 50 60 70 80 90 100 130 140 150 160 170 180 ee0381 TWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|119 TWLGISCSSYERSSNAREPHLKIPNCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH 110 120 130 140 150 160 190 200 210 220 230 240 ee0381 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT 170 180 190 200 210 220 250 260 270 280 290 300 ee0381 NKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC 230 240 250 260 270 280 310 320 330 340 350 360 ee0381 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS 290 300 310 320 330 340 370 380 390 400 410 420 ee0381 VQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSE ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|119 VQTLFQQARAKSEELAALSSQ-PEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSE 350 360 370 380 390 400 430 440 450 460 470 480 ee0381 EHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGIL 410 420 430 440 450 460 490 500 ee0381 KDYPHSAFTLEKKVIKTEPEDSR ::::::::::::::::::::::: gi|119 KDYPHSAFTLEKKVIKTEPEDSR 470 480 >>gi|55729640|emb|CAH91549.1| hypothetical protein [Pong (485 aa) initn: 2645 init1: 2352 opt: 3133 Z-score: 3579.7 bits: 671.8 E(): 1.3e-190 Smith-Waterman score: 3133; 98.973% identity (99.384% similar) in 487 aa overlap (17-503:1-485) 10 20 30 40 50 60 ee0381 VFTFFFFFGRLNPSRVMAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA ::::::::::::::::::::::::::::::::::::::::: :: gi|557 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLREA 10 20 30 40 70 80 90 100 110 120 ee0381 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP 50 60 70 80 90 100 130 140 150 160 170 180 ee0381 TWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 TWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH 110 120 130 140 150 160 190 200 210 220 230 240 ee0381 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT 170 180 190 200 210 220 250 260 270 280 290 300 ee0381 NKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|557 NKKLAKMIGHILEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC 230 240 250 260 270 280 310 320 330 340 350 360 ee0381 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|557 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQES 290 300 310 320 330 340 370 380 390 400 410 420 ee0381 VQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSE ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|557 VQTLFQQARAKSEELAALSSQ-PEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSE 350 360 370 380 390 400 430 440 450 460 470 480 ee0381 EHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGIL :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: gi|557 EHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFV-DGELSRLYPSEAKSHSSESLGIL 410 420 430 440 450 460 490 500 ee0381 KDYPHSAFTLEKKVIKTEPEDSR ::::::::::::::::::::::: gi|557 KDYPHSAFTLEKKVIKTEPEDSR 470 480 >>gi|154425656|gb|AAI51356.1| NAB1 protein [Bos taurus] (487 aa) initn: 3088 init1: 3088 opt: 3088 Z-score: 3528.2 bits: 662.3 E(): 9.2e-188 Smith-Waterman score: 3088; 95.893% identity (99.179% similar) in 487 aa overlap (17-503:1-487) 10 20 30 40 50 60 ee0381 VFTFFFFFGRLNPSRVMAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA :::::::::::::::::::::::::::::::::::::::::::: gi|154 MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA 10 20 30 40 70 80 90 100 110 120 ee0381 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|154 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP 50 60 70 80 90 100 130 140 150 160 170 180 ee0381 TWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH ::::::::::::.:..:::::::::::::::::::: :::::::::::::...::::::: gi|154 TWLGISCSSYERNSSSREPHLKIPKCAATTCVQSLGPGKSDVVGSLALQSISDSRLWQGH 110 120 130 140 150 160 190 200 210 220 230 240 ee0381 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|154 HATESEHSLSPADLGSPASPKESSEVLDAAAALSVAECVERMAPTLPKSDLNEVKELLKT 170 180 190 200 210 220 250 260 270 280 290 300 ee0381 NKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|154 NKKLAKMIGHIFEMSDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC 230 240 250 260 270 280 310 320 330 340 350 360 ee0381 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|154 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS 290 300 310 320 330 340 370 380 390 400 410 420 ee0381 VQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSE ::::::::.::::::.:::::::::::::::::::.::::.::::::::::::::::::. gi|154 VQTLFQQAKAKSEELTALSSQQPEKVMAKQMEFLCTQAGYDRLQHAERRLSAGLYRQSSD 350 360 370 380 390 400 430 440 450 460 470 480 ee0381 EHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGIL ::::::: ::...:::::::::::::::::::::::::::::: : :::::::::::::: gi|154 EHSPNGLMSDSAEGQGERPLNLRMPNLQNRQPHHFVVDGELSRHYSSEAKSHSSESLGIL 410 420 430 440 450 460 490 500 ee0381 KDYPHSAFTLEKKVIKTEPEDSR ::::::::::::::::::::::: gi|154 KDYPHSAFTLEKKVIKTEPEDSR 470 480 >>gi|10720094|sp|O35589.1|NAB1_MESAU RecName: Full=NGFI- (485 aa) initn: 2383 init1: 1461 opt: 2952 Z-score: 3372.8 bits: 633.6 E(): 4.2e-179 Smith-Waterman score: 2952; 92.608% identity (97.536% similar) in 487 aa overlap (17-503:1-485) 10 20 30 40 50 60 ee0381 VFTFFFFFGRLNPSRVMAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA ::.:::::::::::::::::::::::: :::::::::::::::: gi|107 MATALPRTLGELQLYRILQKANLLSYFGAFIQQGGDDVQQLCEA 10 20 30 40 70 80 90 100 110 120 ee0381 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|107 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPKGSP 50 60 70 80 90 100 130 140 150 160 170 180 ee0381 TWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH :::::::.::::.:.:::::::::::::::::::::::::.: ::::.:::.:::::::: gi|107 TWLGISCNSYERNSSAREPHLKIPKCAATTCVQSLGQGKSEV-GSLAVQSVSESRLWQGH 110 120 130 140 150 160 190 200 210 220 230 240 ee0381 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT :::::::::::::.::::::::::::::::::::::::::::: :::::::::::::::. gi|107 HATESEHSLSPADVGSPASPKESSEALDAAAALSVAECVERMASTLPKSDLNEVKELLKN 170 180 190 200 210 220 250 260 270 280 290 300 ee0381 NKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC ::::::::::::::.:.::::::::::::::::::::::::::::::::::::::::::: gi|107 NKKLAKMIGHIFEMSDEDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC 230 240 250 260 270 280 310 320 330 340 350 360 ee0381 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS :::::::::::::::::::.:::::::::::::. :::::::::::::::::::::::. gi|107 VKDNALLTRRDELFALARQVSREVTYKYTYRTTRLKCGERDELSPKRIKVEDGFPDFQEP 290 300 310 320 330 340 370 380 390 400 410 420 ee0381 VQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSE :::::::::::::::::::::: :: ::::::.:: ::.:::::. ::::.:::::::: gi|107 VQTLFQQARAKSEELAALSSQQTEKGMAKQMELLCAQASYERLQQ-ERRLTAGLYRQSSG 350 360 370 380 390 400 430 440 450 460 470 480 ee0381 EHSPNGLTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGIL ::::.:: ::.:::::::::::::::.:::::::::.:::::::: :::::::::.:::: gi|107 EHSPDGLPSDGSDGQGERPLNLRMPNVQNRQPHHFVADGELSRLYSSEAKSHSSENLGIL 410 420 430 440 450 460 490 500 ee0381 KDYPHSAFTLEKKVIKTEPEDSR ::::::::::::::::::::::: gi|107 KDYPHSAFTLEKKVIKTEPEDSR 470 480 >>gi|915282|gb|AAC52236.1| NAB1 gi|12408308|ref|NP_0 (570 aa) initn: 1577 init1: 1342 opt: 2950 Z-score: 3369.5 bits: 633.2 E(): 6.4e-179 Smith-Waterman score: 2950; 91.903% identity (97.166% similar) in 494 aa overlap (11-503:80-570) 10 20 30 40 ee0381 VFTFFFFFGRLNPSRVMAAALPRTLGELQLYRILQKANLL :.:: :::.::::::::::::::::::::: gi|915 RWARGRPGRRSRRRSPAEPLSRIAPQPRAALSPSTVMATALPRTLGELQLYRILQKANLL 50 60 70 80 90 100 50 60 70 80 90 100 ee0381 SYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|915 SYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQ 110 120 130 140 150 160 110 120 130 140 150 160 ee0381 PLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKS :::::::::::::::::::::::::::.::::::.:::::::.::::::::::::::::: gi|915 PLTSLPVSSIPIYKLPEGSPTWLGISCNSYERSSSAREPHLKVPKCAATTCVQSLGQGKS 170 180 190 200 210 220 170 180 190 200 210 220 ee0381 DVVGSLALQSVGESRLWQGHHATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVE .: ::::::::.:::::::::.:::::::::::::::::::::::::::::::::::::: gi|915 EV-GSLALQSVSESRLWQGHHTTESEHSLSPADLGSPASPKESSEALDAAAALSVAECVE 230 240 250 260 270 280 230 240 250 260 270 280 ee0381 RMAPTLPKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRK :::::::::::::::::::.::::::::::::::.:.::::::::::::::::::::::: gi|915 RMAPTLPKSDLNEVKELLKNNKKLAKMIGHIFEMSDEDPHKEEEIRKYSAIYGRFDSKRK 290 300 310 320 330 340 290 300 310 320 330 340 ee0381 DGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGER :::::::::::::::::::::::::::::::::::::::.:::::::::::::. ::::: gi|915 DGKHLTLHELTVNEAAAQLCVKDNALLTRRDELFALARQVSREVTYKYTYRTTRLKCGER 350 360 370 380 390 400 350 360 370 380 390 400 ee0381 DELSPKRIKVEDGFPDFQDSVQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGY :::::::::.::::::::.:: ::::::::::::::.:::: :: ::::::.:: :::: gi|915 DELSPKRIKMEDGFPDFQESVPTLFQQARAKSEELAGLSSQA-EKGMAKQMELLCAQAGY 410 420 430 440 450 460 410 420 430 440 450 ee0381 ERLQHAERRLSAGLYRQSSEEHSPNG-LTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDG ::::. :::: :::::::: :.::.: : ::.::::::::::::.:..:::::::::::: gi|915 ERLQQ-ERRLMAGLYRQSSGEQSPDGGLPSDGSDGQGERPLNLRIPSVQNRQPHHFVVDG 470 480 490 500 510 520 460 470 480 490 500 ee0381 ELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIKTEPEDSR :::::: .:.:::::::::::::::::::::::::::::::::: gi|915 ELSRLYSNEVKSHSSESLGILKDYPHSAFTLEKKVIKTEPEDSR 530 540 550 560 570 >>gi|13542862|gb|AAH05627.1| Ngfi-A binding protein 1 [M (486 aa) initn: 1949 init1: 1949 opt: 2948 Z-score: 3368.2 bits: 632.7 E(): 7.5e-179 Smith-Waterman score: 2948; 92.418% identity (97.746% similar) in 488 aa overlap (17-503:1-486) 10 20 30 40 50 60 ee0381 VFTFFFFFGRLNPSRVMAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA ::.::::::::::::::::::::::::::::::::::::::::: gi|135 MATALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEA 10 20 30 40 70 80 90 100 110 120 ee0381 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 GEEEFLEIMALVGMASKPLHVRRLQKALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSP 50 60 70 80 90 100 130 140 150 160 170 180 ee0381 TWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLGQGKSDVVGSLALQSVGESRLWQGH :::::::.::::::..::::::::::::::::::::::::.: ::::::::..::::::: gi|135 TWLGISCNSYERSSSSREPHLKIPKCAATTCVQSLGQGKSEV-GSLALQSVSDSRLWQGH 110 120 130 140 150 160 190 200 210 220 230 240 ee0381 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLNEVKELLKT :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::. gi|135 HATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTLPKSDLSEVKELLKN 170 180 190 200 210 220 250 260 270 280 290 300 ee0381 NKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC ::::::::::::::.:.::::::::::::::::::::::::::::::::::::::::::: gi|135 NKKLAKMIGHIFEMSDEDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAAAQLC 230 240 250 260 270 280 310 320 330 340 350 360 ee0381 VKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDS :::::::::::::::::::.:::::::::::::. ::::::::::::::.::::::::.: gi|135 VKDNALLTRRDELFALARQVSREVTYKYTYRTTRLKCGERDELSPKRIKIEDGFPDFQES 290 300 310 320 330 340 370 380 390 400 410 420 ee0381 VQTLFQQARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSE : ::::::::::::::.:.::: :: ::::::.:: ::::::::. ::::.:::::::: gi|135 VPTLFQQARAKSEELAGLGSQQAEKGMAKQMELLCAQAGYERLQQ-ERRLTAGLYRQSSG 350 360 370 380 390 400 430 440 450 460 470 ee0381 EHSPNG-LTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGI :.::.: : ::.::::::::::::.:..:::::::::::::::::: ::::::::::::: gi|135 EQSPDGGLPSDSSDGQGERPLNLRIPSVQNRQPHHFVVDGELSRLYSSEAKSHSSESLGI 410 420 430 440 450 460 480 490 500 ee0381 LKDYPHSAFTLEKKVIKTEPEDSR :::::::::::::::::::::::: gi|135 LKDYPHSAFTLEKKVIKTEPEDSR 470 480 503 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 03:15:34 2009 done: Thu Jun 18 03:18:36 2009 Total Scan time: 1161.560 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]