hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-12593230/chunk_1/iprscan-20090525-12593230.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: ee03983
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00449                                                 119.7    3.2e-31   1
SM00589                                                 105.6    5.7e-27   1
SM00184                                                  50.3    2.5e-10   1
SM00336                                                  43.1    3.7e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00184    1/1      30    70 ..     1    23 []    50.3  2.5e-10
SM00336    1/1     103   144 ..     1    51 []    43.1  3.7e-08
SM00589    1/1     307   360 ..     1    56 []   105.6  5.7e-27
SM00449    1/1     361   486 ..     1   145 []   119.7  3.2e-31

Alignments of top-scoring domains:
SM00184: domain 1 of 1, from 30 to 70: score 50.3, E = 2.5e-10
                   *->CpICle....pvvlpCgH.FCr.Ci............CPlC<-*
                      C++Cle  ++pv+++CgH+FC+ Ci++++++ +++ +CP+C   
     ee03983    30    CSVCLEylkePVIIECGHnFCKaCItrwwedlerdfpCPVC    70   

SM00336: domain 1 of 1, from 103 to 144: score 43.1, E = 3.7e-08
                   *->eraplCeeHgdeepaeffCveedgallCrdCdeageHqanklfrgHr
                      + + lC++H+  e + +fC  ed+++ C++C  + +H      r H+
     ee03983   103    RDESLCPQHH--EALSLFC-YEDQEAVCLICAISHTH------RAHT 140  

                   vvll<-*
                   vv+l   
     ee03983   141 VVPL    144  

SM00589: domain 1 of 1, from 307 to 360: score 105.6, E = 5.7e-27
                   *->avdvtLDPdTAhpkLlLSeDrrsVrygdtkqkGsnlpdnPeRFdsyp
                       +dvtLDP+TAhp+L+LSeDr+sV++ +t+ +  +lpd+P+RF++yp
     ee03983   307    IADVTLDPETAHPNLVLSEDRKSVKFVETRLR--DLPDTPRRFTFYP 351  

                   cVLGsegFs<-*
                   cVL+ egF+   
     ee03983   352 CVLATEGFT    360  

SM00449: domain 1 of 1, from 361 to 486: score 119.7, E = 3.2e-31
                   *->sGkhYfEVevdtggdkghwrvGvatksvhlypfkvrrkrkggvsllG
                      sG+hY+EVev++   k+hw vGv+++sv+         rkg+  +l+
     ee03983   361    SGRHYWEVEVGD---KTHWAVGVCRDSVS---------RKGELTPLP 395  

                   edkgSwgyrgdggkkyhasefgeeyglpfqepgDviGcflDleaggStis
                   e  g+w +r+++g ky a ++ + ++l+ + +++++G+flD+eag  t+s
     ee03983   396 ET-GYWRVRLWNGDKYAATTT-PFTPLHIKVKPKRVGIFLDYEAG--TLS 441  

                   FykNGkyLgdshilaffdvtfsgpLyPavslgstdgGgesvrlnfGp.p<
                   Fy++ ++   shi++f d tf+++L P +++g + g +++++l++ p+  
     ee03983   442 FYNVTDR---SHIYTFTD-TFTEKLWPLFYPGIRAGRKNAAPLTIRPpT  486  

                   -*
                     
     ee03983     -    -    

//