hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-03242194/chunk_1/iprscan-20090618-03242194.nocrc
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Query sequence: ee04183
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00096.16.ls Zinc finger, C2H2 type                          51.8    2.1e-12   3
PF00096.16.fs Zinc finger, C2H2 type                          50.6    4.8e-12   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00096.16.fs   3/3     723   745 ..     1    24 []    25.7  3.6e-05
PF00096.16.ls   3/3     723   745 ..     1    24 []    27.7  3.8e-05

Alignments of top-scoring domains:
PF00096.16.fs: domain 3 of 3, from 723 to 745: score 25.7, E = 3.6e-05
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                       kCp +C++sF+ +++L rH+ +H   
     ee04183   723    LKCP-ICNESFRERHHLSRHMTSH    745  

PF00096.16.ls: domain 3 of 3, from 723 to 745: score 27.7, E = 3.8e-05
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                       kCp +C++sF+ +++L rH+ +H   
     ee04183   723    LKCP-ICNESFRERHHLSRHMTSH    745  

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