hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-03242194/chunk_1/iprscan-20090618-03242194.nocrc
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Query sequence: ee04183
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                  41.4    1.2e-07   3

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/3     212   240 ..     1    23 []     0.5  2.8e+02
SM00355      2/3     682   704 ..     1    23 []    13.0       11
SM00355      3/3     723   745 ..     1    23 []    27.9   0.0014

Alignments of top-scoring domains:
SM00355: domain 1 of 3, from 212 to 240: score 0.5, E = 2.8e+02
                   *->ykCpigCgksfssk.aLkrHmr......vH<-*
                      y+C + C+++f  +  ++ H+r + +++ H   
     ee04183   212    YTCLE-CSQRFQFEfPYVAHLRfrcpkrLH    240  

SM00355: domain 2 of 3, from 682 to 704: score 13.0, E = 11
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                        C + C+ sf+  ++L+ Hmr+H   
     ee04183   682    NWCAK-CNASFRMTsDLVYHMRSH    704  

SM00355: domain 3 of 3, from 723 to 745: score 27.9, E = 0.0014
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kCpi C++sf+ +++L rHm +H   
     ee04183   723    LKCPI-CNESFRERhHLSRHMTSH    745  

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