hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090526/iprscan-20090526-15320276/chunk_1/iprscan-20090526-15320276.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: ee09753
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
PF06466.2.ls   PCAF (P300/CBP-associated factor) N-te   633.3   1.9e-187   1
PF06466.2.fs   PCAF (P300/CBP-associated factor) N-te   631.5   6.8e-187   1
PF00439.15.ls  Bromodomain                              130.6    4.2e-36   1
PF00439.15.fs  Bromodomain                              128.6      1e-35   1
PF00583.14.fs  Acetyltransferase (GNAT) family           56.6    2.6e-18   1
PF00583.14.ls  Acetyltransferase (GNAT) family           58.6    1.9e-14   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
PF06466.2.fs     1/1      86   336 ..     1   276 []   631.5 6.8e-187
PF06466.2.ls     1/1      86   336 ..     1   276 []   633.3 1.9e-187
PF00583.14.fs    1/1     550   627 ..     1    80 []    56.6  2.6e-18
PF00583.14.ls    1/1     550   627 ..     1    80 []    58.6  1.9e-14
PF00439.15.ls    1/1     732   819 ..     1    92 []   130.6  4.2e-36
PF00439.15.fs    1/1     732   819 ..     1    92 []   128.6    1e-35

Alignments of top-scoring domains:
PF06466.2.fs: domain 1 of 1, from 86 to 336: score 631.5, E = 6.8e-187
                   *->ikqRkaqvrnlPlakKlekLgvfsACkAeesCkCnGwkPvLnpedet
                      ++qRkaqvr+lP+akKlekLgvfsACkA+e+CkCnGwk   np+++t
     ee09753    86    ASQRKAQVRGLPRAKKLEKLGVFSACKANETCKCNGWK---NPKPPT 129  

                   verRAtRAEREnDFAPmtrDLeqlYgselieeCRntsCgHsLasHvshLe
                   + +R              +DL+q+ +++l+e+CR  sC+H+La+HvshLe
     ee09753   130 A-PR--------------MDLQQP-AANLSELCR--SCEHPLADHVSHLE 161  

                   nvSeeeldrLlgaiiDlenLfmslhkiePsdedtkqvYfyLfkLLrkciL
                   nvSe+e++rLlg+++D+enLfms+hk+e  d+dtkqvYfyLfkLLrkciL
     ee09753   162 NVSEDEINRLLGMVVDVENLFMSVHKEE--DTDTKQVYFYLFKLLRKCIL 209  

                   qrlkPVveGsLGkkPpFEkpsieqgVLnfvfykfshLdnaErQtlaElak
                   q+++PVveGsLG +PpFEkp+ieqgVLnfv+ykfshL+++ErQt++El+k
     ee09753   210 QMTRPVVEGSLG-SPPFEKPNIEQGVLNFVQYKFSHLAPRERQTMFELSK 258  

                   lFLnelNhWkLEgpsqrrdrlnveLdvskYkinYtRwlcYcnvPafcdSL
                   +FL++lN+WkLE+p+q+r+r+++e dv++Yk+nYtRwlcYc+vP++cdSL
     ee09753   259 MFLLCLNYWKLETPAQFRQRSQAE-DVATYKVNYTRWLCYCHVPQSCDSL 307  

                   kqyeTtdVFGrtllrtvftvlrrqLlekn<-*
                   ++yeTt+VFGr+llr++ftv+rrqLlek+   
     ee09753   308 PRYETTHVFGRSLLRSIFTVTRRQLLEKF    336  

PF06466.2.ls: domain 1 of 1, from 86 to 336: score 633.3, E = 1.9e-187
                   *->ikqRkaqvrnlPlakKlekLgvfsACkAeesCkCnGwkPvLnpedet
                      ++qRkaqvr+lP+akKlekLgvfsACkA+e+CkCnGwk   np+++t
     ee09753    86    ASQRKAQVRGLPRAKKLEKLGVFSACKANETCKCNGWK---NPKPPT 129  

                   verRAtRAEREnDFAPmtrDLeqlYgselieeCRntsCgHsLasHvshLe
                   + +R              +DL+q+ +++l+e+CR  sC+H+La+HvshLe
     ee09753   130 A-PR--------------MDLQQP-AANLSELCR--SCEHPLADHVSHLE 161  

                   nvSeeeldrLlgaiiDlenLfmslhkiePsdedtkqvYfyLfkLLrkciL
                   nvSe+e++rLlg+++D+enLfms+hk+e  d+dtkqvYfyLfkLLrkciL
     ee09753   162 NVSEDEINRLLGMVVDVENLFMSVHKEE--DTDTKQVYFYLFKLLRKCIL 209  

                   qrlkPVveGsLGkkPpFEkpsieqgVLnfvfykfshLdnaErQtlaElak
                   q+++PVveGsLG +PpFEkp+ieqgVLnfv+ykfshL+++ErQt++El+k
     ee09753   210 QMTRPVVEGSLG-SPPFEKPNIEQGVLNFVQYKFSHLAPRERQTMFELSK 258  

                   lFLnelNhWkLEgpsqrrdrlnveLdvskYkinYtRwlcYcnvPafcdSL
                   +FL++lN+WkLE+p+q+r+r+++e dv++Yk+nYtRwlcYc+vP++cdSL
     ee09753   259 MFLLCLNYWKLETPAQFRQRSQAE-DVATYKVNYTRWLCYCHVPQSCDSL 307  

                   kqyeTtdVFGrtllrtvftvlrrqLlekn<-*
                   ++yeTt+VFGr+llr++ftv+rrqLlek+   
     ee09753   308 PRYETTHVFGRSLLRSIFTVTRRQLLEKF    336  

PF00583.14.fs: domain 1 of 1, from 550 to 627: score 56.6, E = 2.6e-18
                   *->lvaeedgelvGfaglspide..vaeieglaVdpeyRgkGiGtaLlea
                      l+  +dg+++G +++++++ ++ +ei ++aV  + + kG+Gt+L+++
     ee09753   550    LALIKDGRVIGGICFRMFPTqgFTEIVFCAVTSNEQVKGYGTHLMNH 596  

                   leeyareelGlkrieleveedNeaAialYeklGFk<-*
                   l ey  +    + i  + +++ e Ai++++k+GF    
     ee09753   597 LKEYHIK----HNILYFLTYADEYAIGYFKKQGFS    627  

PF00583.14.ls: domain 1 of 1, from 550 to 627: score 58.6, E = 1.9e-14
                   *->lvaeedgelvGfaglspide..vaeieglaVdpeyRgkGiGtaLlea
                      l+  +dg+++G +++++++ ++ +ei ++aV  + + kG+Gt+L+++
     ee09753   550    LALIKDGRVIGGICFRMFPTqgFTEIVFCAVTSNEQVKGYGTHLMNH 596  

                   leeyareelGlkrieleveedNeaAialYeklGFk<-*
                   l ey  +    + i  + +++ e Ai++++k+GF    
     ee09753   597 LKEYHIK----HNILYFLTYADEYAIGYFKKQGFS    627  

PF00439.15.ls: domain 1 of 1, from 732 to 819: score 130.6, E = 4.2e-36
                   *->lnklllkvlealdehgpralpflfpVlpsklelPDYYeiIkkPMDLk
                      l+ +l+++l ++++h p a+pf++pV++s  e+PDYYe+I+ P+DLk
     ee09753   732    LYTTLKNLLAQIKSH-PSAWPFMEPVKKS--EAPDYYEVIRFPIDLK 775  

                   TIkkklkngkYissleeFvaDfnLmfsNAktYNepdsevykdAkk<-*
                   T+ ++l++++Y ++++ FvaD++++  N++ YN+pdse+ ++A     
     ee09753   776 TMTERLRSRYY-VTRKLFVADLQRVIANCREYNPPDSEYCRCASA    819  

PF00439.15.fs: domain 1 of 1, from 732 to 819: score 128.6, E = 1e-35
                   *->lnklllkvlealdehgpralpflfpVlpsklelPDYYeiIkkPMDLk
                      l+ +l+++l ++++h p a+pf++pV++s  e+PDYYe+I+ P+DLk
     ee09753   732    LYTTLKNLLAQIKSH-PSAWPFMEPVKKS--EAPDYYEVIRFPIDLK 775  

                   TIkkklkngkYissleeFvaDfnLmfsNAktYNepdsevykdAkk<-*
                   T+ ++l++++Y ++++ FvaD++++  N++ YN+pdse+ ++A     
     ee09753   776 TMTERLRSRYY-VTRKLFVADLQRVIANCREYNPPDSEYCRCASA    819  

//