hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-03370410/chunk_1/iprscan-20090618-03370410.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: ee10584
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00097.15.fs Zinc finger, C3HC4 type (RING finger)           40.9    6.1e-14   1
PF00097.15.ls Zinc finger, C3HC4 type (RING finger)           42.8    1.1e-09   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00097.15.fs   1/1     166   210 ..     1    50 []    40.9  6.1e-14
PF00097.15.ls   1/1     166   210 ..     1    50 []    42.8  1.1e-09

Alignments of top-scoring domains:
PF00097.15.fs: domain 1 of 1, from 166 to 210: score 40.9, E = 6.1e-14
                   *->CrICleelkepsnd..fplilpCgHsGslkyfCrsClerwlsssgnt
                      C+IC+++++e + +++ +  ++CgH      fC+ Cl+  l+  + +
     ee10584   166    CPICMDGYSEIVQNgrLIVSTECGHV-----FCSQCLRDSLK--NAN 205  

                   tCplC<-*
                   tCp C   
     ee10584   206 TCPTC    210  

PF00097.15.ls: domain 1 of 1, from 166 to 210: score 42.8, E = 1.1e-09
                   *->CrICleelkepsnd..fplilpCgHsGslkyfCrsClerwlsssgnt
                      C+IC+++++e + +++ +  ++CgH      fC+ Cl+  l+  + +
     ee10584   166    CPICMDGYSEIVQNgrLIVSTECGHV-----FCSQCLRDSLK--NAN 205  

                   tCplC<-*
                   tCp C   
     ee10584   206 TCPTC    210  

//