# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oee13635.fasta.nr -Q ee13635.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ee13635, 522 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8984305 sequences Expectation_n fit: rho(ln(x))= 5.6632+/-0.000188; mu= 9.8039+/- 0.011 mean_var=87.7821+/-17.479, 0's: 32 Z-trim: 37 B-trim: 5761 in 2/63 Lambda= 0.136890 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|90101767|sp|Q12800.2|TFCP2_HUMAN RecName: Full= ( 502) 3395 680.4 3.5e-193 gi|476099|gb|AAA21324.1| transcription factor LSF ( 502) 3389 679.2 8e-193 gi|109096686|ref|XP_001087537.1| PREDICTED: simila ( 502) 3386 678.6 1.2e-192 gi|119578582|gb|EAW58178.1| transcription factor C ( 501) 3378 677.1 3.6e-192 gi|73996654|ref|XP_534801.2| PREDICTED: similar to ( 502) 3378 677.1 3.6e-192 gi|149714317|ref|XP_001504347.1| PREDICTED: transc ( 502) 3375 676.5 5.4e-192 gi|133778175|gb|AAI23453.1| TFCP2 protein [Bos tau ( 500) 3347 670.9 2.5e-190 gi|148672133|gb|EDL04080.1| transcription factor C ( 535) 3318 665.2 1.4e-188 gi|81868283|sp|Q9ERA0.1|TFCP2_MOUSE RecName: Full= ( 502) 3293 660.3 4.1e-187 gi|149032028|gb|EDL86940.1| rCG50655 [Rattus norve ( 501) 3290 659.7 6.1e-187 gi|18381013|gb|AAH22131.1| Transcription factor CP ( 500) 3266 654.9 1.6e-185 gi|195540234|gb|AAI68176.1| Tcfcp2 protein [Rattus ( 497) 3243 650.4 3.8e-184 gi|82096148|sp|Q7T2U9.1|TFCP2_CHICK RecName: Full= ( 496) 3190 639.9 5.3e-181 gi|114644702|ref|XP_001149767.1| PREDICTED: transc ( 517) 3145 631.1 2.6e-178 gi|74190860|dbj|BAE28214.1| unnamed protein produc ( 505) 3124 626.9 4.5e-177 gi|125852928|ref|XP_001336482.1| PREDICTED: wu:fc1 ( 496) 3053 612.9 7.5e-173 gi|114644710|ref|XP_509063.2| PREDICTED: transcrip ( 445) 2901 582.8 7.5e-164 gi|156765946|dbj|BAF79610.1| cCP2 transcription fa ( 506) 2680 539.2 1.1e-150 gi|82186029|sp|Q6NZH6.1|TFCP2_XENTR RecName: Full= ( 507) 2623 528.0 2.8e-147 gi|82225931|sp|Q4V860.1|TFCP2_XENLA RecName: Full= ( 506) 2621 527.6 3.6e-147 gi|32264649|gb|AAP78771.1| transcription factor LS ( 506) 2573 518.1 2.6e-144 gi|119584860|gb|EAW64456.1| upstream binding prote ( 504) 2517 507.0 5.5e-141 gi|545524|gb|AAB29975.1| LBP-1a=transcription fact ( 504) 2511 505.8 1.3e-140 gi|109052705|ref|XP_001099636.1| PREDICTED: simila ( 504) 2509 505.4 1.7e-140 gi|73989642|ref|XP_857947.1| PREDICTED: similar to ( 503) 2501 503.9 4.9e-140 gi|10435136|dbj|BAB14501.1| unnamed protein produc ( 503) 2496 502.9 9.8e-140 gi|951098|gb|AAC52244.1| NF2d9 [Mus musculus domes ( 504) 2486 500.9 3.9e-139 gi|187954387|gb|AAI41083.1| Ubp1 protein [Mus musc ( 504) 2478 499.3 1.2e-138 gi|224054680|ref|XP_002190345.1| PREDICTED: transc ( 554) 2444 492.6 1.3e-136 gi|126326096|ref|XP_001362535.1| PREDICTED: simila ( 478) 2441 492.0 1.8e-136 gi|118093774|ref|XP_422087.2| PREDICTED: similar t ( 475) 2438 491.4 2.6e-136 gi|149638476|ref|XP_001509273.1| PREDICTED: simila ( 478) 2435 490.8 4e-136 gi|114580658|ref|XP_001173167.1| PREDICTED: LBP-9 ( 793) 2423 488.6 3.1e-135 gi|47229217|emb|CAG03969.1| unnamed protein produc ( 517) 2415 486.9 6.6e-135 gi|74734729|sp|Q9NZI6.1|TF2L1_HUMAN RecName: Full= ( 479) 2414 486.7 7.1e-135 gi|194222142|ref|XP_001498864.2| PREDICTED: simila ( 682) 2413 486.6 1.1e-134 gi|119888163|ref|XP_596627.3| PREDICTED: similar t ( 479) 2390 481.9 1.9e-133 gi|149033088|gb|EDL87906.1| transcription factor C ( 479) 2389 481.7 2.2e-133 gi|109733355|gb|AAI16664.1| Tcfcp2l1 protein [Mus ( 479) 2370 478.0 2.9e-132 gi|90101766|sp|Q3UNW5.1|TF2L1_MOUSE RecName: Full= ( 478) 2353 474.6 3e-131 gi|109104487|ref|XP_001085443.1| PREDICTED: simila ( 484) 2318 467.7 3.6e-129 gi|114585909|ref|XP_001168503.1| PREDICTED: simila ( 507) 2301 464.4 3.9e-128 gi|73984166|ref|XP_852721.1| PREDICTED: similar to ( 588) 2259 456.1 1.4e-125 gi|62630125|gb|AAX88871.1| unknown [Homo sapiens] ( 447) 2255 455.2 1.9e-125 gi|75041959|sp|Q5RB16.1|TF2L1_PONAB RecName: Full= ( 457) 2241 452.5 1.3e-124 gi|12659009|gb|AAK01150.1|AF311309_1 transcription ( 481) 2168 438.1 3e-120 gi|114585911|ref|XP_001168475.1| PREDICTED: simila ( 437) 2158 436.1 1.1e-119 gi|73989640|ref|XP_542691.2| PREDICTED: similar to ( 388) 2070 418.7 1.7e-114 gi|73989646|ref|XP_858030.1| PREDICTED: similar to ( 503) 2055 415.8 1.6e-113 gi|114644712|ref|XP_001149833.1| PREDICTED: transc ( 512) 2049 414.6 3.7e-113 >>gi|90101767|sp|Q12800.2|TFCP2_HUMAN RecName: Full=Alph (502 aa) initn: 3395 init1: 3395 opt: 3395 Z-score: 3625.5 bits: 680.4 E(): 3.5e-193 Smith-Waterman score: 3395; 100.000% identity (100.000% similar) in 502 aa overlap (21-522:1-502) 10 20 30 40 50 60 ee1363 NYPPRLCTRHGVSWGKEGARMAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM :::::::::::::::::::::::::::::::::::::::: gi|901 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM 10 20 30 40 70 80 90 100 110 120 ee1363 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML 50 60 70 80 90 100 130 140 150 160 170 180 ee1363 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI 110 120 130 140 150 160 190 200 210 220 230 240 ee1363 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE 170 180 190 200 210 220 250 260 270 280 290 300 ee1363 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW 230 240 250 260 270 280 310 320 330 340 350 360 ee1363 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN 290 300 310 320 330 340 370 380 390 400 410 420 ee1363 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ 350 360 370 380 390 400 430 440 450 460 470 480 ee1363 LREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 LREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYK 410 420 430 440 450 460 490 500 510 520 ee1363 QGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK :::::::::::::::::::::::::::::::::::::::::: gi|901 QGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK 470 480 490 500 >>gi|476099|gb|AAA21324.1| transcription factor LSF (502 aa) initn: 3389 init1: 3389 opt: 3389 Z-score: 3619.1 bits: 679.2 E(): 8e-193 Smith-Waterman score: 3389; 99.801% identity (99.801% similar) in 502 aa overlap (21-522:1-502) 10 20 30 40 50 60 ee1363 NYPPRLCTRHGVSWGKEGARMAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM :::::::::::::::::::::::::::::::::::::::: gi|476 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM 10 20 30 40 70 80 90 100 110 120 ee1363 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML 50 60 70 80 90 100 130 140 150 160 170 180 ee1363 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI 110 120 130 140 150 160 190 200 210 220 230 240 ee1363 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE 170 180 190 200 210 220 250 260 270 280 290 300 ee1363 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW 230 240 250 260 270 280 310 320 330 340 350 360 ee1363 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN 290 300 310 320 330 340 370 380 390 400 410 420 ee1363 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ 350 360 370 380 390 400 430 440 450 460 470 480 ee1363 LREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 LREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYK 410 420 430 440 450 460 490 500 510 520 ee1363 QGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK :::::::::::::::::::::::::::::: ::::::::::: gi|476 QGPTGIHVLISDEMIQNFQEEACFILDTMKQETNDSYHIILK 470 480 490 500 >>gi|109096686|ref|XP_001087537.1| PREDICTED: similar to (502 aa) initn: 3386 init1: 3386 opt: 3386 Z-score: 3615.9 bits: 678.6 E(): 1.2e-192 Smith-Waterman score: 3386; 99.801% identity (100.000% similar) in 502 aa overlap (21-522:1-502) 10 20 30 40 50 60 ee1363 NYPPRLCTRHGVSWGKEGARMAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM :::::::::::::::::::::::::::::::::::::::: gi|109 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM 10 20 30 40 70 80 90 100 110 120 ee1363 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML 50 60 70 80 90 100 130 140 150 160 170 180 ee1363 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI 110 120 130 140 150 160 190 200 210 220 230 240 ee1363 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE 170 180 190 200 210 220 250 260 270 280 290 300 ee1363 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW 230 240 250 260 270 280 310 320 330 340 350 360 ee1363 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN 290 300 310 320 330 340 370 380 390 400 410 420 ee1363 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ 350 360 370 380 390 400 430 440 450 460 470 480 ee1363 LREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYK ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|109 LREQQQQQQQQQQKQEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYK 410 420 430 440 450 460 490 500 510 520 ee1363 QGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK :::::::::::::::::::::::::::::::::::::::::: gi|109 QGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK 470 480 490 500 >>gi|119578582|gb|EAW58178.1| transcription factor CP2, (501 aa) initn: 3601 init1: 3323 opt: 3378 Z-score: 3607.4 bits: 677.1 E(): 3.6e-192 Smith-Waterman score: 3378; 99.801% identity (99.801% similar) in 502 aa overlap (21-522:1-501) 10 20 30 40 50 60 ee1363 NYPPRLCTRHGVSWGKEGARMAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM :::::::::::::::::::::::::::::::::::::::: gi|119 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM 10 20 30 40 70 80 90 100 110 120 ee1363 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML 50 60 70 80 90 100 130 140 150 160 170 180 ee1363 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI 110 120 130 140 150 160 190 200 210 220 230 240 ee1363 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE 170 180 190 200 210 220 250 260 270 280 290 300 ee1363 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW 230 240 250 260 270 280 310 320 330 340 350 360 ee1363 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN 290 300 310 320 330 340 370 380 390 400 410 420 ee1363 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ 350 360 370 380 390 400 430 440 450 460 470 480 ee1363 LREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYK 410 420 430 440 450 460 490 500 510 520 ee1363 QGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK :::::::::::::::::::::::::::::: ::::::::::: gi|119 QGPTGIHVLISDEMIQNFQEEACFILDTMK-ETNDSYHIILK 470 480 490 500 >>gi|73996654|ref|XP_534801.2| PREDICTED: similar to tra (502 aa) initn: 3378 init1: 3378 opt: 3378 Z-score: 3607.4 bits: 677.1 E(): 3.6e-192 Smith-Waterman score: 3378; 99.801% identity (99.801% similar) in 502 aa overlap (21-522:1-502) 10 20 30 40 50 60 ee1363 NYPPRLCTRHGVSWGKEGARMAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM :::::::::::::::::::::::::::::::::::::::: gi|739 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM 10 20 30 40 70 80 90 100 110 120 ee1363 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML 50 60 70 80 90 100 130 140 150 160 170 180 ee1363 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI 110 120 130 140 150 160 190 200 210 220 230 240 ee1363 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE 170 180 190 200 210 220 250 260 270 280 290 300 ee1363 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW 230 240 250 260 270 280 310 320 330 340 350 360 ee1363 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN 290 300 310 320 330 340 370 380 390 400 410 420 ee1363 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ 350 360 370 380 390 400 430 440 450 460 470 480 ee1363 LREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYK :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|739 LREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPRQISQIYK 410 420 430 440 450 460 490 500 510 520 ee1363 QGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK :::::::::::::::::::::::::::::::::::::::::: gi|739 QGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK 470 480 490 500 >>gi|149714317|ref|XP_001504347.1| PREDICTED: transcript (502 aa) initn: 3375 init1: 3375 opt: 3375 Z-score: 3604.2 bits: 676.5 E(): 5.4e-192 Smith-Waterman score: 3375; 99.602% identity (99.801% similar) in 502 aa overlap (21-522:1-502) 10 20 30 40 50 60 ee1363 NYPPRLCTRHGVSWGKEGARMAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM :::::::::::::::::::::::::::::::::::::::: gi|149 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM 10 20 30 40 70 80 90 100 110 120 ee1363 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML 50 60 70 80 90 100 130 140 150 160 170 180 ee1363 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI 110 120 130 140 150 160 190 200 210 220 230 240 ee1363 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE 170 180 190 200 210 220 250 260 270 280 290 300 ee1363 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW 230 240 250 260 270 280 310 320 330 340 350 360 ee1363 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN 290 300 310 320 330 340 370 380 390 400 410 420 ee1363 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ 350 360 370 380 390 400 430 440 450 460 470 480 ee1363 LREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYK ::::::::::::::::::::::.::::::::::::::::::::::::::::: ::::::: gi|149 LREQQQQQQQQQQKHEDGDSNGSFFVYHAIYLEELTAVELTEKIAQLFSISPRQISQIYK 410 420 430 440 450 460 490 500 510 520 ee1363 QGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK :::::::::::::::::::::::::::::::::::::::::: gi|149 QGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK 470 480 490 500 >>gi|133778175|gb|AAI23453.1| TFCP2 protein [Bos taurus] (500 aa) initn: 3516 init1: 2799 opt: 3347 Z-score: 3574.3 bits: 670.9 E(): 2.5e-190 Smith-Waterman score: 3347; 99.203% identity (99.602% similar) in 502 aa overlap (21-522:1-500) 10 20 30 40 50 60 ee1363 NYPPRLCTRHGVSWGKEGARMAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM :::::::::::::::::::::::::::::::::::::::: gi|133 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM 10 20 30 40 70 80 90 100 110 120 ee1363 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML 50 60 70 80 90 100 130 140 150 160 170 180 ee1363 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI 110 120 130 140 150 160 190 200 210 220 230 240 ee1363 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 IDPRANPNQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE 170 180 190 200 210 220 250 260 270 280 290 300 ee1363 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW 230 240 250 260 270 280 310 320 330 340 350 360 ee1363 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN 290 300 310 320 330 340 370 380 390 400 410 420 ee1363 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|133 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ 350 360 370 380 390 400 430 440 450 460 470 480 ee1363 LREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYK :::::::::.:: ::::::::::::::::::::::::::::::::::::::::::::::: gi|133 LREQQQQQQNQQ-KHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYK 410 420 430 440 450 490 500 510 520 ee1363 QGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK :::::::::::::::::::::::::::::: ::::::::::: gi|133 QGPTGIHVLISDEMIQNFQEEACFILDTMK-ETNDSYHIILK 460 470 480 490 500 >>gi|148672133|gb|EDL04080.1| transcription factor CP2, (535 aa) initn: 2436 init1: 2436 opt: 3318 Z-score: 3543.0 bits: 665.2 E(): 1.4e-188 Smith-Waterman score: 3318; 95.703% identity (97.852% similar) in 512 aa overlap (11-522:26-535) 10 20 30 40 ee1363 NYPPRLCTRHGVSWGKEGARMAWALKLPLADEVIESGLVQDFDAS :. :::::: ::::::::::::::::::::::::: gi|148 FAVHASRRSWWLRRVWGRLGGTLGAGACWGKEGAGMAWALKLPLADEVIESGLVQDFDAS 10 20 30 40 50 60 50 60 70 80 90 100 ee1363 LSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDET :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|148 LSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDNENEILPFQYVLCAATSPAVKLHDET 70 80 90 100 110 120 110 120 130 140 150 160 ee1363 LTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRP :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|148 LTYLNQGQSYEIRMLDNRKLGELPELNGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRP 130 140 150 160 170 180 170 180 190 200 210 220 ee1363 GDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEK ::::::::::::::.:::::::::::::::::::.::::::::::::::::::::::::: gi|148 GDRILDIDIPMSVGVIDPRANPTQLNTVEFLWDPSKRTSVFIQVHCISTEFTMRKHGGEK 190 200 210 220 230 240 230 240 250 260 270 280 ee1363 GVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKY :::::::::::::: :::::::::::::::::::::::::::: :::::::::::::::: gi|148 GVPFRVQIDTFKENGNGEYTEHLHSASCQIKVFKPKGADRKQKIDREKMEKRTPHEKEKY 250 260 270 280 290 300 290 300 310 320 330 340 ee1363 QPSYETTILTECSPWPEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QPSYETTILTECSPWPEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLL 310 320 330 340 350 360 350 360 370 380 390 400 ee1363 PTTTPQEAQQWLHRNRFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRM :::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|148 PTTTPQEAQQWLHRNRFSTFTRLFTNFS--DLLKLTRDDVIQICGPADGIRLFNALKGRM 370 380 390 400 410 410 420 430 440 450 460 ee1363 VRPRLTIYVCQESLQLREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIA :::::::::::::::::::: : : : ::.:::::::::::::::::::::::::::::: gi|148 VRPRLTIYVCQESLQLREQQPQPQPQPQKQEDGDSNGTFFVYHAIYLEELTAVELTEKIA 420 430 440 450 460 470 470 480 490 500 510 520 ee1363 QLFSISPCQISQIYKQGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK ::::::: :::::::::::::::.:::::.::::::::::::::.:::.::::.::: gi|148 QLFSISPHQISQIYKQGPTGIHVVISDEMVQNFQEEACFILDTMEAETSDSYHVILK 480 490 500 510 520 530 >>gi|81868283|sp|Q9ERA0.1|TFCP2_MOUSE RecName: Full=Alph (502 aa) initn: 3293 init1: 3293 opt: 3293 Z-score: 3516.7 bits: 660.3 E(): 4.1e-187 Smith-Waterman score: 3293; 96.614% identity (98.606% similar) in 502 aa overlap (21-522:1-502) 10 20 30 40 50 60 ee1363 NYPPRLCTRHGVSWGKEGARMAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM :::::::::::::::::::::::::::::::::::::::: gi|818 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM 10 20 30 40 70 80 90 100 110 120 ee1363 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|818 SDVLALPIFKQEESSLPPDNENEILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML 50 60 70 80 90 100 130 140 150 160 170 180 ee1363 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::. gi|818 DNRKLGELPELNGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGV 110 120 130 140 150 160 190 200 210 220 230 240 ee1363 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE :::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|818 IDPRANPTQLNTVEFLWDPSKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENG 170 180 190 200 210 220 250 260 270 280 290 300 ee1363 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|818 NGEYTEHLHSASCQIKVFKPKGADRKQKIDREKMEKRTPHEKEKYQPSYETTILTECSPW 230 240 250 260 270 280 310 320 330 340 350 360 ee1363 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN 290 300 310 320 330 340 370 380 390 400 410 420 ee1363 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ 350 360 370 380 390 400 430 440 450 460 470 480 ee1363 LREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYK ::::: : : : ::.::::::::::::::::::::::::::::::::::::: ::::::: gi|818 LREQQPQPQPQPQKQEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPHQISQIYK 410 420 430 440 450 460 490 500 510 520 ee1363 QGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK ::::::::.:::::.::::::::::::::.:::.::::.::: gi|818 QGPTGIHVVISDEMVQNFQEEACFILDTMEAETSDSYHVILK 470 480 490 500 >>gi|149032028|gb|EDL86940.1| rCG50655 [Rattus norvegicu (501 aa) initn: 2815 init1: 2765 opt: 3290 Z-score: 3513.5 bits: 659.7 E(): 6.1e-187 Smith-Waterman score: 3290; 97.012% identity (98.805% similar) in 502 aa overlap (21-522:1-501) 10 20 30 40 50 60 ee1363 NYPPRLCTRHGVSWGKEGARMAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM :::::::::::::::::::::::::::::::::::::::: gi|149 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSM 10 20 30 40 70 80 90 100 110 120 ee1363 SDVLALPIFKQEESSLPPDNENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML ::::::::::::::::::.:::.::::::::::::::::::::::::::::::::::::: gi|149 SDVLALPIFKQEESSLPPENENEILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRML 50 60 70 80 90 100 130 140 150 160 170 180 ee1363 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|149 DNRKLGELPEINGKLVKSIFRVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGV 110 120 130 140 150 160 190 200 210 220 230 240 ee1363 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IDPRANPTQLNTVEFLWDPAKRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENE 170 180 190 200 210 220 250 260 270 280 290 300 ee1363 NGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPW :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|149 NGEYTEHLHSASCQIKVFKPKGADRKQKIDREKMEKRTPHEKEKYQPSYETTILTECSPW 230 240 250 260 270 280 310 320 330 340 350 360 ee1363 PEITYVNNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PEITYVSNSPSPGFNSSHSSFSLGEGNGSPNHQPEPPPPVTDNLLPTTTPQEAQQWLHRN 290 300 310 320 330 340 370 380 390 400 410 420 ee1363 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RFSTFTRLFTNFSGADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQ 350 360 370 380 390 400 430 440 450 460 470 480 ee1363 LREQQQQQQQQQQKHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYK :::: :: : :: :.::::::::::::::::::::::::::::::::::::: ::::::: gi|149 LREQPQQPQPQQ-KQEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPQQISQIYK 410 420 430 440 450 490 500 510 520 ee1363 QGPTGIHVLISDEMIQNFQEEACFILDTMKAETNDSYHIILK ::::::::::::::.::::::::::::::.:::.::::.::: gi|149 QGPTGIHVLISDEMVQNFQEEACFILDTMEAETSDSYHVILK 460 470 480 490 500 522 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 03:40:08 2009 done: Thu Jun 18 03:43:10 2009 Total Scan time: 1163.700 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]