# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oee13770.fasta.nr -Q ee13770.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ee13770, 677 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6807470 sequences Expectation_n fit: rho(ln(x))= 6.4278+/-0.000204; mu= 6.9479+/- 0.011 mean_var=136.1879+/-26.036, 0's: 39 Z-trim: 132 B-trim: 43 in 1/64 Lambda= 0.109902 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|85681028|sp|Q13948|CASP_HUMAN Protein CASP ( 678) 4241 684.3 3.1e-194 gi|62897223|dbj|BAD96552.1| CCAAT displacement pro ( 678) 4235 683.4 6e-194 gi|457517|gb|AAA35654.1| alternatively spliced ( 678) 4234 683.2 6.7e-194 gi|75041633|sp|Q5R8V1.1|CASP_PONAB Protein CASP ( 678) 4233 683.1 7.5e-194 gi|31652238|ref|NP_852477.1| cut-like homeobox 1 i ( 676) 4214 680.0 6e-193 gi|90075196|dbj|BAE87278.1| unnamed protein produc ( 678) 4214 680.0 6.1e-193 gi|19343976|gb|AAH25422.1| Cut-like homeobox 1 [Ho ( 676) 4207 678.9 1.3e-192 gi|55725454|emb|CAH89591.1| hypothetical protein [ ( 692) 4091 660.6 4.6e-187 gi|88682926|gb|AAI05547.1| CUX1 protein [Bos tauru ( 675) 4081 659.0 1.3e-186 gi|15679964|gb|AAH14289.1| Cut-like homeobox 1 [Mu ( 678) 4025 650.1 6.4e-184 gi|148687363|gb|EDL19310.1| cut-like 1 (Drosophila ( 680) 4025 650.1 6.4e-184 gi|85720588|sp|P70403|CASP_MOUSE Protein CASP ( 678) 4009 647.5 3.7e-183 gi|110815859|ref|NP_941004.2| cut-like homeobox 1 ( 676) 3998 645.8 1.2e-182 gi|148687364|gb|EDL19311.1| cut-like 1 (Drosophila ( 680) 3998 645.8 1.2e-182 gi|1546825|gb|AAB08430.1| mCASP [Mus musculus] ( 676) 3982 643.3 7.1e-182 gi|32484289|gb|AAH54370.1| Cux1 protein [Mus muscu ( 667) 3948 637.9 3e-180 gi|148687361|gb|EDL19308.1| cut-like 1 (Drosophila ( 672) 3944 637.2 4.6e-180 gi|50927521|gb|AAH79570.1| Cux1 protein [Mus muscu ( 667) 3890 628.7 1.7e-177 gi|7670454|dbj|BAA95078.1| unnamed protein product ( 762) 3826 618.6 2.2e-174 gi|193784987|dbj|BAG54140.1| unnamed protein produ ( 662) 3775 610.4 5.3e-172 gi|895613|gb|AAA69678.1| CASP gene product ( 675) 3708 599.8 8.5e-169 gi|193784147|dbj|BAG53691.1| unnamed protein produ ( 632) 3328 539.5 1.1e-150 gi|50369124|gb|AAH75748.1| Cut-like 1 (Drosophila) ( 672) 3110 505.0 3e-140 gi|76879897|dbj|BAE45765.1| putative protein produ ( 484) 3015 489.8 8.1e-136 gi|114615146|ref|XP_527845.2| PREDICTED: CCAAT dis (1515) 2550 416.6 2.8e-113 gi|42793995|gb|AAH66592.1| CUX1 protein [Homo sapi (1516) 2550 416.6 2.8e-113 gi|110835729|ref|NP_034116.3| cut-like homeobox 1 (1426) 2504 409.2 4.2e-111 gi|60688551|gb|AAH90847.1| Cut-like homeobox 1 [Mu (1426) 2504 409.2 4.2e-111 gi|109497079|ref|XP_001070410.1| PREDICTED: simila (1426) 2497 408.1 9.2e-111 gi|109497077|ref|XP_001070482.1| PREDICTED: simila (1528) 2487 406.6 2.9e-110 gi|149062988|gb|EDM13311.1| cut-like 1 (Drosophila ( 428) 2467 402.9 1.1e-109 gi|148687362|gb|EDL19309.1| cut-like 1 (Drosophila (1519) 2432 397.8 1.2e-107 gi|300300|gb|AAB26579.1| CCAAT displacement protei (1505) 2418 395.6 5.6e-107 gi|148277064|ref|NP_853530.2| cut-like homeobox 1 (1505) 2418 395.6 5.6e-107 gi|76803552|sp|P39880|CUTL1_HUMAN Homeobox protein (1505) 2418 395.6 5.6e-107 gi|109066243|ref|XP_001114534.1| PREDICTED: simila (1791) 2415 395.2 8.8e-107 gi|194218881|ref|XP_001916140.1| PREDICTED: cut-li (1327) 2382 389.9 2.7e-105 gi|119917099|ref|XP_601985.3| PREDICTED: similar t (1532) 2381 389.8 3.3e-105 gi|109495543|ref|XP_347164.3| PREDICTED: similar t (1511) 2366 387.4 1.7e-104 gi|14346042|gb|AAK59986.1| CCAAT displacement prot (1517) 2363 386.9 2.4e-104 gi|126314484|ref|XP_001378627.1| PREDICTED: simila (1696) 2351 385.0 9.6e-104 gi|149062990|gb|EDM13313.1| cut-like 1 (Drosophila ( 513) 2336 382.2 2.2e-103 gi|76363508|sp|P53564|CUTL1_MOUSE Homeobox protein (1515) 2336 382.6 4.6e-103 gi|118100079|ref|XP_425393.2| PREDICTED: similar t (1673) 2324 380.8 1.9e-102 gi|73957802|ref|XP_546939.2| PREDICTED: similar to (1411) 2084 342.6 4.7e-91 gi|74201402|dbj|BAE26142.1| unnamed protein produc ( 445) 2006 329.8 1.1e-87 gi|30172688|gb|AAP22331.1| unknown [Homo sapiens] ( 317) 1905 313.6 5.7e-83 gi|1518860|gb|AAB07138.1| CASP ( 318) 1848 304.6 3e-80 gi|47224998|emb|CAF97413.1| unnamed protein produc (1183) 1821 300.9 1.5e-78 gi|41471576|gb|AAS07406.1| unknown [Homo sapiens] ( 259) 1691 279.6 8.1e-73 >>gi|85681028|sp|Q13948|CASP_HUMAN Protein CASP gi|1 (678 aa) initn: 4241 init1: 4241 opt: 4241 Z-score: 3642.3 bits: 684.3 E(): 3.1e-194 Smith-Waterman score: 4241; 100.000% identity (100.000% similar) in 677 aa overlap (1-677:2-678) 10 20 30 40 50 ee1377 AANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL 10 20 30 40 50 60 60 70 80 90 100 110 ee1377 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH 70 80 90 100 110 120 120 130 140 150 160 170 ee1377 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ 130 140 150 160 170 180 180 190 200 210 220 230 ee1377 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI 190 200 210 220 230 240 240 250 260 270 280 290 ee1377 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE 250 260 270 280 290 300 300 310 320 330 340 350 ee1377 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA 310 320 330 340 350 360 360 370 380 390 400 410 ee1377 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGR 370 380 390 400 410 420 420 430 440 450 460 470 ee1377 CAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 CAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATA 430 440 450 460 470 480 480 490 500 510 520 530 ee1377 LFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 LFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL 490 500 510 520 530 540 540 550 560 570 580 590 ee1377 RADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 RADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPW 550 560 570 580 590 600 600 610 620 630 640 650 ee1377 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADH 610 620 630 640 650 660 660 670 ee1377 LHKFHENDNGAAAGDLWQ :::::::::::::::::: gi|856 LHKFHENDNGAAAGDLWQ 670 >>gi|62897223|dbj|BAD96552.1| CCAAT displacement protein (678 aa) initn: 4235 init1: 4235 opt: 4235 Z-score: 3637.1 bits: 683.4 E(): 6e-194 Smith-Waterman score: 4235; 99.705% identity (100.000% similar) in 677 aa overlap (1-677:2-678) 10 20 30 40 50 ee1377 AANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL 10 20 30 40 50 60 60 70 80 90 100 110 ee1377 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH 70 80 90 100 110 120 120 130 140 150 160 170 ee1377 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ 130 140 150 160 170 180 180 190 200 210 220 230 ee1377 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI 190 200 210 220 230 240 240 250 260 270 280 290 ee1377 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE 250 260 270 280 290 300 300 310 320 330 340 350 ee1377 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA 310 320 330 340 350 360 360 370 380 390 400 410 ee1377 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGR 370 380 390 400 410 420 420 430 440 450 460 470 ee1377 CAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATA :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|628 CAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGATEHRLEKIPEPIKEATA 430 440 450 460 470 480 480 490 500 510 520 530 ee1377 LFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 LFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL 490 500 510 520 530 540 540 550 560 570 580 590 ee1377 RADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPW ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 RADNIKLFEKVKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPW 550 560 570 580 590 600 600 610 620 630 640 650 ee1377 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADH 610 620 630 640 650 660 660 670 ee1377 LHKFHENDNGAAAGDLWQ :::::::::::::::::: gi|628 LHKFHENDNGAAAGDLWQ 670 >>gi|457517|gb|AAA35654.1| alternatively spliced (678 aa) initn: 4234 init1: 4234 opt: 4234 Z-score: 3636.3 bits: 683.2 E(): 6.7e-194 Smith-Waterman score: 4234; 99.852% identity (100.000% similar) in 677 aa overlap (1-677:2-678) 10 20 30 40 50 ee1377 AANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL 10 20 30 40 50 60 60 70 80 90 100 110 ee1377 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH 70 80 90 100 110 120 120 130 140 150 160 170 ee1377 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ 130 140 150 160 170 180 180 190 200 210 220 230 ee1377 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI 190 200 210 220 230 240 240 250 260 270 280 290 ee1377 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE 250 260 270 280 290 300 300 310 320 330 340 350 ee1377 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA 310 320 330 340 350 360 360 370 380 390 400 410 ee1377 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGR 370 380 390 400 410 420 420 430 440 450 460 470 ee1377 CAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 CAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATA 430 440 450 460 470 480 480 490 500 510 520 530 ee1377 LFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 LFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL 490 500 510 520 530 540 540 550 560 570 580 590 ee1377 RADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 RADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPW 550 560 570 580 590 600 600 610 620 630 640 650 ee1377 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADH ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|457 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKLADH 610 620 630 640 650 660 660 670 ee1377 LHKFHENDNGAAAGDLWQ :::::::::::::::::: gi|457 LHKFHENDNGAAAGDLWQ 670 >>gi|75041633|sp|Q5R8V1.1|CASP_PONAB Protein CASP gi (678 aa) initn: 4233 init1: 4233 opt: 4233 Z-score: 3635.4 bits: 683.1 E(): 7.5e-194 Smith-Waterman score: 4233; 99.557% identity (100.000% similar) in 677 aa overlap (1-677:2-678) 10 20 30 40 50 ee1377 AANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL 10 20 30 40 50 60 60 70 80 90 100 110 ee1377 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH 70 80 90 100 110 120 120 130 140 150 160 170 ee1377 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ 130 140 150 160 170 180 180 190 200 210 220 230 ee1377 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI 190 200 210 220 230 240 240 250 260 270 280 290 ee1377 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE 250 260 270 280 290 300 300 310 320 330 340 350 ee1377 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA 310 320 330 340 350 360 360 370 380 390 400 410 ee1377 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGR 370 380 390 400 410 420 420 430 440 450 460 470 ee1377 CAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATA :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 CAELQVRVTEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATA 430 440 450 460 470 480 480 490 500 510 520 530 ee1377 LFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LFYGPTAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL 490 500 510 520 530 540 540 550 560 570 580 590 ee1377 RADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPW ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|750 RADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSMSPW 550 560 570 580 590 600 600 610 620 630 640 650 ee1377 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADH 610 620 630 640 650 660 660 670 ee1377 LHKFHENDNGAAAGDLWQ :::::::::::::::::: gi|750 LHKFHENDNGAAAGDLWQ 670 >>gi|31652238|ref|NP_852477.1| cut-like homeobox 1 isofo (676 aa) initn: 2458 init1: 2458 opt: 4214 Z-score: 3619.1 bits: 680.0 E(): 6e-193 Smith-Waterman score: 4214; 99.705% identity (99.705% similar) in 677 aa overlap (1-677:2-676) 10 20 30 40 50 ee1377 AANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|316 MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL 10 20 30 40 50 60 60 70 80 90 100 110 ee1377 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|316 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH 70 80 90 100 110 120 120 130 140 150 160 170 ee1377 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|316 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ 130 140 150 160 170 180 180 190 200 210 220 230 ee1377 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|316 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI 190 200 210 220 230 240 240 250 260 270 280 290 ee1377 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE ::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: gi|316 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDV--AIEVLTRSSLE 250 260 270 280 290 300 310 320 330 340 350 ee1377 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|316 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA 300 310 320 330 340 350 360 370 380 390 400 410 ee1377 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|316 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGR 360 370 380 390 400 410 420 430 440 450 460 470 ee1377 CAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|316 CAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATA 420 430 440 450 460 470 480 490 500 510 520 530 ee1377 LFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|316 LFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL 480 490 500 510 520 530 540 550 560 570 580 590 ee1377 RADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|316 RADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPW 540 550 560 570 580 590 600 610 620 630 640 650 ee1377 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|316 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADH 600 610 620 630 640 650 660 670 ee1377 LHKFHENDNGAAAGDLWQ :::::::::::::::::: gi|316 LHKFHENDNGAAAGDLWQ 660 670 >>gi|90075196|dbj|BAE87278.1| unnamed protein product [M (678 aa) initn: 4214 init1: 4214 opt: 4214 Z-score: 3619.1 bits: 680.0 E(): 6.1e-193 Smith-Waterman score: 4214; 99.261% identity (99.852% similar) in 677 aa overlap (1-677:2-678) 10 20 30 40 50 ee1377 AANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL 10 20 30 40 50 60 60 70 80 90 100 110 ee1377 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH 70 80 90 100 110 120 120 130 140 150 160 170 ee1377 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ 130 140 150 160 170 180 180 190 200 210 220 230 ee1377 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI 190 200 210 220 230 240 240 250 260 270 280 290 ee1377 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE 250 260 270 280 290 300 300 310 320 330 340 350 ee1377 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 VELAAKEWEIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA 310 320 330 340 350 360 360 370 380 390 400 410 ee1377 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGR ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|900 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLMEKNRSLQSENAALRISNSDLSGR 370 380 390 400 410 420 420 430 440 450 460 470 ee1377 CAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATA :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 CAELQVRVTEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATA 430 440 450 460 470 480 480 490 500 510 520 530 ee1377 LFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 LFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL 490 500 510 520 530 540 540 550 560 570 580 590 ee1377 RADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPW ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|900 RADNIKLFEKIKFLQSYPGRGSSSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPW 550 560 570 580 590 600 600 610 620 630 640 650 ee1377 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADH ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|900 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESVERDCATFCAKKFADH 610 620 630 640 650 660 660 670 ee1377 LHKFHENDNGAAAGDLWQ :::::::::::::::::: gi|900 LHKFHENDNGAAAGDLWQ 670 >>gi|19343976|gb|AAH25422.1| Cut-like homeobox 1 [Homo s (676 aa) initn: 2451 init1: 2451 opt: 4207 Z-score: 3613.1 bits: 678.9 E(): 1.3e-192 Smith-Waterman score: 4207; 99.409% identity (99.705% similar) in 677 aa overlap (1-677:2-676) 10 20 30 40 50 ee1377 AANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL 10 20 30 40 50 60 60 70 80 90 100 110 ee1377 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH 70 80 90 100 110 120 120 130 140 150 160 170 ee1377 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ 130 140 150 160 170 180 180 190 200 210 220 230 ee1377 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI 190 200 210 220 230 240 240 250 260 270 280 290 ee1377 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE ::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: gi|193 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDV--AIEVLTRSSLE 250 260 270 280 290 300 310 320 330 340 350 ee1377 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA 300 310 320 330 340 350 360 370 380 390 400 410 ee1377 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGR ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|193 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSESAALRISNSDLSGR 360 370 380 390 400 410 420 430 440 450 460 470 ee1377 CAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 CAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATA 420 430 440 450 460 470 480 490 500 510 520 530 ee1377 LFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 LFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL 480 490 500 510 520 530 540 550 560 570 580 590 ee1377 RADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPW ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 RADNVKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPW 540 550 560 570 580 590 600 610 620 630 640 650 ee1377 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADH 600 610 620 630 640 650 660 670 ee1377 LHKFHENDNGAAAGDLWQ :::::::::::::::::: gi|193 LHKFHENDNGAAAGDLWQ 660 670 >>gi|55725454|emb|CAH89591.1| hypothetical protein [Pong (692 aa) initn: 4091 init1: 4091 opt: 4091 Z-score: 3513.6 bits: 660.6 E(): 4.6e-187 Smith-Waterman score: 4091; 99.090% identity (100.000% similar) in 659 aa overlap (19-677:34-692) 10 20 30 40 ee1377 AANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQS ..:::::::::::::::::::::::::::: gi|557 GAGKGGPQTPVESPTASSKLPQVHWLCSPGIKRELDATATVLANRQDESEQSRKRLIEQS 10 20 30 40 50 60 50 60 70 80 90 100 ee1377 REFKKNTPEDLRKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 REFKKNTPEDLRKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLG 70 80 90 100 110 120 110 120 130 140 150 160 ee1377 QQLQLKVQRLHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 QQLQLKVQRLHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAE 130 140 150 160 170 180 170 180 190 200 210 220 ee1377 TIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 TIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKY 190 200 210 220 230 240 230 240 250 260 270 280 ee1377 DEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQ ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|557 DEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLRLASQIQKAPDVEQ 250 260 270 280 290 300 290 300 310 320 330 340 ee1377 AIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 AIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTL 310 320 330 340 350 360 350 360 370 380 390 400 ee1377 KQLEEKLKGQADYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 KQLEEKLKGQADYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAA 370 380 390 400 410 420 410 420 430 440 450 460 ee1377 LRISNSDLSGRCAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLE ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|557 LRISNSDLSGRCAELQVRVTEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLE 430 440 450 460 470 480 470 480 490 500 510 520 ee1377 KIPEPIKEATALFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHT ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|557 KIPEPIKEATALFYGPTAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHT 490 500 510 520 530 540 530 540 550 560 570 580 ee1377 LQALQSELDSLRADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 LQALQSELDSLRADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRE 550 560 570 580 590 600 590 600 610 620 630 640 ee1377 RQRKYLSLSPWDKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDC :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 RQRKYLSMSPWDKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDC 610 620 630 640 650 660 650 660 670 ee1377 ATFCAKKFADHLHKFHENDNGAAAGDLWQ ::::::::::::::::::::::::::::: gi|557 ATFCAKKFADHLHKFHENDNGAAAGDLWQ 670 680 690 >>gi|88682926|gb|AAI05547.1| CUX1 protein [Bos taurus] (675 aa) initn: 2900 init1: 2900 opt: 4081 Z-score: 3505.2 bits: 659.0 E(): 1.3e-186 Smith-Waterman score: 4081; 96.154% identity (98.965% similar) in 676 aa overlap (2-677:1-675) 10 20 30 40 50 60 ee1377 AANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|886 ANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLR 10 20 30 40 50 70 80 90 100 110 120 ee1377 KQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|886 KQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLHD 60 70 80 90 100 110 130 140 150 160 170 180 ee1377 IETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|886 IETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQN 120 130 140 150 160 170 190 200 210 220 230 240 ee1377 DFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEIE ::::::::::::::::::::::::::::.:::::::::::::::::::::: :::::::: gi|886 DFAEKERKLQETQMSTTSKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEEITAKADEIE 180 190 200 210 220 230 250 260 270 280 290 300 ee1377 MIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|886 MIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLEA 240 250 260 270 280 290 310 320 330 340 350 360 ee1377 ELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQAD :::::::::::::::::::::.:.:::::::::::::::::::::::::::::::::::: gi|886 ELAAKEREIAQLVEDVQRLQANLSKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQAD 300 310 320 330 340 350 370 380 390 400 410 420 ee1377 YEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGRC ::::::::::::::::::.::::::::..::::::::::::::::::::::::::::::: gi|886 YEEVKKELNILKSMEFAPAEGAGTQDASRPLEVLLLEKNRSLQSENAALRISNSDLSGRC 360 370 380 390 400 410 430 440 450 460 470 480 ee1377 AELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATAL :::::..:: .:::.:::::::::::::: :::::::::::::: :::::::::::::: gi|886 AELQVHVTELTATAAEQRELIARLEQDLSTIQSIQRPDAEGAAELGLEKIPEPIKEATAL 420 430 440 450 460 470 490 500 510 520 530 540 ee1377 FYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSLR ::::.:::: .:::::::::::::::::::::::::::::::::::::.::::.:::::: gi|886 FYGPSAPAS-SLPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTIQALQTELDSLR 480 490 500 510 520 530 550 560 570 580 590 600 ee1377 ADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPWD ::::::::::::::::::::.::::::::::.:::::::::::::::::::::::::::: gi|886 ADNIKLFEKIKFLQSYPGRGGGSDDTELRYSTQYEERLDPFSSFSKRERQRKYLSLSPWD 540 550 560 570 580 590 610 620 630 640 650 660 ee1377 KATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADHL :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|886 KATLSMGRLVLSNKMARTIGFFYTLFLHLLVFLVLYKLAWSESMERDCATFCAKKFADHL 600 610 620 630 640 650 670 ee1377 HKFHENDNGAAAGDLWQ :::::::.:.::::::: gi|886 HKFHENDKGVAAGDLWQ 660 670 >>gi|15679964|gb|AAH14289.1| Cut-like homeobox 1 [Mus mu (678 aa) initn: 4025 init1: 4025 opt: 4025 Z-score: 3457.2 bits: 650.1 E(): 6.4e-184 Smith-Waterman score: 4025; 93.944% identity (98.671% similar) in 677 aa overlap (1-677:2-678) 10 20 30 40 50 ee1377 AANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDL 10 20 30 40 50 60 60 70 80 90 100 110 ee1377 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRLH ::::::::::::::::::::::::::::::.::::::::::::::::.::::..:::::: gi|156 RKQVAPLLKSFQGEIDALSKRSKEAEAAFLTVYKRLIDVPDPVPALDVGQQLEIKVQRLH 70 80 90 100 110 120 120 130 140 150 160 170 ee1377 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQ :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|156 DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKSQAETIALEKEQKLQ 130 140 150 160 170 180 180 190 200 210 220 230 ee1377 NDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEETTAKADEI :::::::::::::::::::::::::::.:.:::::::::::::::::::::::::::::: gi|156 NDFAEKERKLQETQMSTTSKLEEAEHKLQTLQTALEKTRTELFDLKTKYDEETTAKADEI 190 200 210 220 230 240 240 250 260 270 280 290 ee1377 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 EMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLE 250 260 270 280 290 300 300 310 320 330 340 350 ee1377 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQA ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|156 VELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLNAKNSTLKQLEEKLKGQA 310 320 330 340 350 360 360 370 380 390 400 410 ee1377 DYEEVKKELNILKSMEFAPSEGAGTQDAAKPLEVLLLEKNRSLQSENAALRISNSDLSGR :::::::::: ::::::::::::::::..:::::::::::::::::::.::::::::::: gi|156 DYEEVKKELNTLKSMEFAPSEGAGTQDSTKPLEVLLLEKNRSLQSENATLRISNSDLSGR 370 380 390 400 410 420 420 430 440 450 460 470 ee1377 CAELQVRITEAVATATEQRELIARLEQDLSIIQSIQRPDAEGAAEHRLEKIPEPIKEATA :::::...:::.: :.::.::::::::::: ::::::::::::.:. ::::::::::::: gi|156 CAELQIHLTEATAKAVEQKELIARLEQDLSTIQSIQRPDAEGASEQGLEKIPEPIKEATA 430 440 450 460 470 480 480 490 500 510 520 530 ee1377 LFYGPAAPASGALPEGQVDSLLSIISSQRERFRARNQELEAENRLAQHTLQALQSELDSL :::::. .::.:::::::::::::::::::::.::::::::.:.::::.:::::::::: gi|156 LFYGPSMSSSGTLPEGQVDSLLSIISSQRERFRTRNQELEAESRMAQHTIQALQSELDSL 490 500 510 520 530 540 540 550 560 570 580 590 ee1377 RADNIKLFEKIKFLQSYPGRGSGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLSLSPW ::::::::::::::::::::: :::::::::::::::::::::::::::::::::.:::: gi|156 RADNIKLFEKIKFLQSYPGRGIGSDDTELRYSSQYEERLDPFSSFSKRERQRKYLGLSPW 550 560 570 580 590 600 600 610 620 630 640 650 ee1377 DKATLSMGRLVLSNKMARTIGFFYTLFLHCLVFLVLYKLAWSESMERDCATFCAKKFADH :::::.::::.:::: ::::::::::::::::::::::::::::.:::::. :::::::: gi|156 DKATLGMGRLILSNKTARTIGFFYTLFLHCLVFLVLYKLAWSESVERDCAATCAKKFADH 610 620 630 640 650 660 660 670 ee1377 LHKFHENDNGAAAGDLWQ ::::::.::::::::::: gi|156 LHKFHESDNGAAAGDLWQ 670 677 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Fri Aug 8 03:54:49 2008 done: Fri Aug 8 03:56:45 2008 Total Scan time: 951.250 Total Display time: 0.290 Function used was FASTA [version 34.26.5 April 26, 2007]