hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-13143646/chunk_1/iprscan-20090525-13143646.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: ee15524
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00431                                                 261.6    6.4e-74   1
SM00355                                                 249.9      2e-70   9
SM00349                                                  76.7    2.8e-18   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00431      1/1      52   164 ..     1   113 []   261.6  6.4e-74
SM00349      1/1     232   293 ..     1    62 []    76.7  2.8e-18
SM00355      1/9     393   415 ..     1    23 []    28.1   0.0012
SM00355      2/9     449   471 ..     1    23 []    23.2    0.037
SM00355      3/9     477   499 ..     1    23 []    24.1     0.02
SM00355      4/9     505   527 ..     1    23 []    32.1  7.6e-05
SM00355      5/9     533   555 ..     1    23 []    32.4    6e-05
SM00355      6/9     590   612 ..     1    23 []    24.6    0.014
SM00355      7/9     618   640 ..     1    23 []    30.6  0.00021
SM00355      8/9     646   668 ..     1    23 []    24.7    0.013
SM00355      9/9     674   696 ..     1    23 []    30.2  0.00028

Alignments of top-scoring domains:
SM00431: domain 1 of 1, from 52 to 164: score 261.6, E = 6.4e-74
                   *->pEifRqrFRqFrYqEtsGPREALSRLRELCrqWLRPElhTKEQILEL
                      pE++++rFR+Fr+qE++GPREALSRL+ELC+ WLRPE++TKEQILEL
     ee15524    52    PEASHLRFRRFRFQEAAGPREALSRLQELCHGWLRPEMRTKEQILEL 98   

                   LVLEQFLTILPgELQaWVrehhPeSGEEAVtLlEdLereLdepgqqVsah
                   LVLEQFLTILP+E+Q++V+e hPeSGEEAVtL+Ed++reL +++qqV++h
     ee15524    99 LVLEQFLTILPQEIQSRVQELHPESGEEAVTLVEDMQRELGRLRQQVTNH 148  

                   vhgqevLleemvplga<-*
                    +g+evLlee  pl++   
     ee15524   149 GRGTEVLLEEPLPLET    164  

SM00349: domain 1 of 1, from 232 to 293: score 76.7, E = 2.8e-18
                   *->VtFeDVAVdFsqEEWeqLDpaQrnLYRdVMlENYsnLvSLGgfqvsk
                       ++eDVA++ sqEEW+++Dp+ r+L Rd+++E Y+n+ SL+  +++ 
     ee15524   232    ESLEDVAMYISQEEWGHQDPSKRALSRDTVQESYENVDSLE-SHIPS 277  

                   p.dliskLEqgeEpwi<-*
                   ++   +++ qg ++w    
     ee15524   278 QeVPGTQVGQGGKLWD    293  

SM00355: domain 1 of 9, from 393 to 415: score 28.1, E = 0.0012
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + Cp+ Cgk fs+ ++L+rH+r+H   
     ee15524   393    HLCPL-CGKNFSNNsNLIRHQRIH    415  

SM00355: domain 2 of 9, from 449 to 471: score 23.2, E = 0.037
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC + Cgk+fs+ ++L+rH+r+H   
     ee15524   449    HKCLE-CGKCFSQNtHLTRHQRTH    471  

SM00355: domain 3 of 9, from 477 to 499: score 24.1, E = 0.02
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C+i Cgk+fs  ++L rH+r+H   
     ee15524   477    YQCNI-CGKCFSCNsNLHRHQRTH    499  

SM00355: domain 4 of 9, from 505 to 527: score 32.1, E = 7.6e-05
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykCp+ Cg+ f + ++L rH+r+H   
     ee15524   505    YKCPE-CGEIFAHSsNLLRHQRIH    527  

SM00355: domain 5 of 9, from 533 to 555: score 32.4, E = 6e-05
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykCp+ Cgksfs+ ++L+ H r+H   
     ee15524   533    YKCPE-CGKSFSRSsHLVIHERTH    555  

SM00355: domain 6 of 9, from 590 to 612: score 24.6, E = 0.014
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C   Cgksf++  +L+rH+r+H   
     ee15524   590    FECLT-CGKSFRQGmHLTRHQRTH    612  

SM00355: domain 7 of 9, from 618 to 640: score 30.6, E = 0.00021
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ Cg+ fs++++L+rH+r+H   
     ee15524   618    YKCTL-CGENFSHRsNLIRHQRIH    640  

SM00355: domain 8 of 9, from 646 to 668: score 24.7, E = 0.013
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cg sfs+ ++ +rH+r+H   
     ee15524   646    YTCHE-CGDSFSHSsNRIRHLRTH    668  

SM00355: domain 9 of 9, from 674 to 696: score 30.2, E = 0.00028
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ Cg+sfs+ + L  H+r+H   
     ee15524   674    YKCSE-CGESFSRSsRLMSHQRTH    696  

//