hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-04145322/chunk_1/iprscan-20080808-04145322.nocrc
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Query sequence: ee19916
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02985.12.ls HEAT repeat                                     76.2    9.5e-20   6
PF02985.12.fs HEAT repeat                                     70.0    1.3e-18   7

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02985.12.ls   2/6     136   172 ..     1    36 []    19.0    0.016
PF02985.12.ls   5/6     675   711 ..     1    36 []    18.8    0.019
PF02985.12.ls   6/6     759   795 ..     1    36 []    17.5    0.045

Alignments of top-scoring domains:
PF02985.12.ls: domain 2 of 6, from 136 to 172: score 19.0, E = 0.016
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                        + + llp++++ l D++  VR+++  aL al+e+    
     ee19916   136    YaFSKFLLPIVVRYLADQNNQVRKTSQAALLALLEQE    172  

PF02985.12.ls: domain 5 of 6, from 675 to 711: score 18.8, E = 0.019
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      +++ d+l p+ l+l+ D++++VR  + + +++++++l   
     ee19916   675    RdVYDYLRPIALNLCADKVSSVRWISYKLVSEMVKKL    711  

PF02985.12.ls: domain 6 of 6, from 759 to 795: score 17.5, E = 0.045
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      +++  +l+p+ll+l nD +p+VR   a++L + +      
     ee19916   759    DqFAVHLMPHLLTLANDRVPNVRVLLAKTLRQTLLEK    795  

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