hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-04043164/chunk_1/iprscan-20090618-04043164.nocrc
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Query sequence: ee21340
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 113.0    3.4e-29   5

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/5     416   438 ..     1    23 []    25.9   0.0057
SM00355      2/5     444   466 ..     1    23 []    27.2   0.0023
SM00355      3/5     969   996 ..     1    23 []     2.2  1.8e+02
SM00355      4/5    2098  2120 ..     1    23 []    27.0   0.0025
SM00355      5/5    2126  2150 ..     1    23 []    30.7   0.0002

Alignments of top-scoring domains:
SM00355: domain 1 of 5, from 416 to 438: score 25.9, E = 0.0057
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C++ C++ +  ++ L +H+r+H   
     ee21340   416    YICEY-CNRACAKPsVLLKHIRSH    438  

SM00355: domain 2 of 5, from 444 to 466: score 27.2, E = 0.0023
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C   Cg+sf++k++L +H ++H   
     ee21340   444    YPCVT-CGFSFKTKsNLYKHKKSH    466  

SM00355: domain 3 of 5, from 969 to 996: score 2.2, E = 1.8e+02
                   *->ykCpigCgksfssk.aLkrHmr.....vH<-*
                      ++C+  C  +++  +++++H +   ++ H   
     ee21340   969    FECET-CRNRYRKLeNFENHKKfycseLH    996  

SM00355: domain 4 of 5, from 2098 to 2120: score 27.0, E = 0.0025
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C++ Cg +++ ++ Lk+H+r+H   
     ee21340  2098    YICEE-CGIRCKKPsMLKKHIRTH    2120 

SM00355: domain 5 of 5, from 2126 to 2150: score 30.7, E = 0.0002
                   *->ykCpigCgksfssk.aLkrHmr..vH<-*
                      y+C++ C++sf++k++L++Hm+++ H   
     ee21340  2126    YHCTY-CNFSFKTKgNLTKHMKskAH    2150 

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