hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-04114664/chunk_1/iprscan-20090618-04114664.nocrc
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Query sequence: ee21720
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00431                                                 270.9      1e-76   1
SM00355                                                 170.2    2.1e-46   6

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00431      1/1      47   160 ..     1   113 []   270.9    1e-76
SM00355      1/6     251   273 ..     1    23 []    28.6  0.00086
SM00355      2/6     279   301 ..     1    23 []    33.0  3.9e-05
SM00355      3/6     307   329 ..     1    23 []    29.4   0.0005
SM00355      4/6     335   357 ..     1    23 []    24.3    0.017
SM00355      5/6     363   385 ..     1    23 []    28.1   0.0012
SM00355      6/6     391   413 ..     1    23 []    26.7   0.0032

Alignments of top-scoring domains:
SM00431: domain 1 of 1, from 47 to 160: score 270.9, E = 1e-76
                   *->pEifRqrFRqFrYqEtsGPREALSRLRELCrqWLRPElhTKEQILEL
                      +E++Rq+FRqF+YqEt+GPREALSRLRELC+qWLRPE+hTKEQILEL
     ee21720    47    QEASRQLFRQFCYQETPGPREALSRLRELCHQWLRPEIHTKEQILEL 93   

                   LVLEQFLTILPgELQaWVrehhPeSGEEAVtLlEdLereLdepgqqVsah
                   LVLEQFLTILP+ELQaWVrehhPeSGEEAV+++EdLe+eL epg q + h
     ee21720    94 LVLEQFLTILPEELQAWVREHHPESGEEAVAVVEDLEQELSEPGNQAPDH 143  

                   vhgq.evLleemvplga<-*
                   +hg++evLle++++l     
     ee21720   144 EHGHsEVLLEDVEHLKV    160  

SM00355: domain 1 of 6, from 251 to 273: score 28.6, E = 0.00086
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ Cgksf+  + L++H+r+H   
     ee21720   251    HRCNE-CGKSFTKSsVLIEHQRIH    273  

SM00355: domain 2 of 6, from 279 to 301: score 33.0, E = 3.9e-05
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk fs++++L++H r+H   
     ee21720   279    YECEE-CGKAFSRRsSLNEHRRSH    301  

SM00355: domain 3 of 6, from 307 to 329: score 29.4, E = 0.0005
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk fs  + L+rH r+H   
     ee21720   307    YQCKE-CGKAFSASnGLTRHRRIH    329  

SM00355: domain 4 of 6, from 335 to 357: score 24.3, E = 0.017
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk f   + L++H+r+H   
     ee21720   335    YECKV-CGKAFLLSsCLVQHQRIH    357  

SM00355: domain 5 of 6, from 363 to 385: score 28.1, E = 0.0012
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C + Cgk f +   L +H+rvH   
     ee21720   363    YQCRE-CGKAFIQNaGLFQHLRVH    385  

SM00355: domain 6 of 6, from 391 to 413: score 26.7, E = 0.0032
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ C+k fs ++ Lk+H+++H   
     ee21720   391    YQCSQ-CSKLFSKRtLLKKHQKIH    413  

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