hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-04234615/chunk_1/iprscan-20090618-04234615.nocrc
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Query sequence: ee22358
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00400.22.ls WD domain, G-beta repeat                        67.2      5e-17   5
PF00400.22.fs WD domain, G-beta repeat                        62.3    1.4e-16   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00400.22.fs   1/5      55    77 ..    15    38 .]    15.1   0.0028
PF00400.22.fs   2/5      81   119 ..     1    38 []    32.4  3.7e-08
PF00400.22.ls   2/5      81   119 ..     1    38 []    34.4  3.8e-07

Alignments of top-scoring domains:
PF00400.22.fs: domain 1 of 5, from 55 to 77: score 15.1, E = 0.0028
                   *->vafspdsgpllasgSrDgtikiWd<-*
                      + f+   g+lla g+ Dg i iWd   
     ee22358    55    CTFNRW-GTLLAVGCNDGRIVIWD    77   

PF00400.22.fs: domain 2 of 5, from 81 to 119: score 32.4, E = 3.7e-08
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                      +   +++++H ++V+++++s d g+ l+s+S D+ +  Wd   
     ee22358    81    RGIAkIIsAHIHPVCSLCWSRD-GHKLVSASTDNIVSQWD    119  

PF00400.22.ls: domain 2 of 5, from 81 to 119: score 34.4, E = 3.8e-07
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                      +   +++++H ++V+++++s d g+ l+s+S D+ +  Wd   
     ee22358    81    RGIAkIIsAHIHPVCSLCWSRD-GHKLVSASTDNIVSQWD    119  

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