hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-04234615/chunk_1/iprscan-20090618-04234615.nocrc
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Query sequence: ee22358
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00320                                                  94.6    1.2e-23   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00320    1/5      39    77 ..     1    46 []    19.5      0.4
SM00320    2/5      80   119 ..     1    46 []    38.0  1.3e-06
SM00320    3/5     207   251 ..     1    46 []    16.0      1.4
SM00320    4/5     266   305 ..     1    46 []     8.5       22
SM00320    5/5     308   347 ..     1    46 []    12.5      5.2

Alignments of top-scoring domains:
SM00320: domain 1 of 5, from 39 to 77: score 19.5, E = 0.4
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      + +   tl++ +     ++++f+  g      +lla+g++Dg i +W
     ee22358    39    PeEADGTLDCISM---ALTCTFNRWG------TLLAVGCnDGRIVIW 76   

                   d<-*
                   d   
     ee22358    77 D    77   

SM00320: domain 2 of 5, from 80 to 119: score 38.0, E = 1.3e-06
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      t+   +++++H +  pV+s+++s dg      + l+s+s+D+ +  W
     ee22358    80    TrGIAKIISAHIH--PVCSLCWSRDG------HKLVSAStDNIVSQW 118  

                   d<-*
                   d   
     ee22358   119 D    119  

SM00320: domain 3 of 5, from 207 to 251: score 16.0, E = 1.4
                   *->t.kllrtlkgHtge...spVtsvafspdggssdspnllasgs.Dgti
                      ++ l+++++  tg+++++++ s+ f   g      ++++    D+ i
     ee22358   207    SqDLVASFRVTTGTsntTAIKSIEFARKG------SCFLINTaDRII 247  

                   rlWd<-*
                   r++d   
     ee22358   248 RVYD    251  

SM00320: domain 4 of 5, from 266 to 305: score 8.5, E = 22
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs..Dgtirl
                      + + l+ l   +   p   ++fs dg      +++++gs + + +++
     ee22358   266    PmQKLQDLV-NRT--PWKKCCFSGDG------EYIVAGSarQHALYI 303  

                   Wd<-*
                   W+   
     ee22358   304 WE    305  

SM00320: domain 5 of 5, from 308 to 347: score 12.5, E = 5.2
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgsDgtirlWd
                       ++l+++l+g +g    ++va++p         ++as s g + +W 
     ee22358   308    IgNLVKILHGTRG-ELLLDVAWHPVR------PIIASISSGVVSIWA 347  

                   <-*
                      
     ee22358     -     -    

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