# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oef00515s1.fasta.nr -Q ef00515s1.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ef00515s1, 2468 aa vs /cdna2/lib/nr/nr library 3124998222 residues in 9136299 sequences statistics sampled from 60000 to 9106998 sequences Expectation_n fit: rho(ln(x))= 7.5457+/-0.000226; mu= 7.6308+/- 0.012 mean_var=239.6255+/-45.464, 0's: 24 Z-trim: 92 B-trim: 133 in 1/65 Lambda= 0.082853 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 44, opt: 32, open/ext: -10/-2, width: 16 The best scores are: opt bits E(9136299) gi|208965294|dbj|BAG72661.1| nuclear receptor co-r (2450) 16601 1999.8 0 gi|226713806|sp|Q9Y618.2|NCOR2_HUMAN RecName: Full (2525) 15747 1897.7 0 gi|116256453|ref|NP_006303.3| nuclear receptor co- (2524) 15728 1895.4 0 gi|119618854|gb|EAW98448.1| nuclear receptor co-re (2471) 15663 1887.6 0 gi|119618857|gb|EAW98451.1| nuclear receptor co-re (2517) 15663 1887.6 0 gi|4454552|gb|AAD20946.1| silencing mediator of re (2517) 15555 1874.7 0 gi|109099209|ref|XP_001102754.1| PREDICTED: nuclea (2527) 15262 1839.7 0 gi|109099211|ref|XP_001102847.1| PREDICTED: nuclea (2520) 15195 1831.7 0 gi|99160008|gb|ABF67537.1| nuclear receptor corepr (2471) 13820 1667.3 0 gi|99160033|gb|ABF67538.1| nuclear receptor corepr (2470) 13393 1616.3 0 gi|194214407|ref|XP_001915492.1| PREDICTED: simila (2519) 11893 1437.0 0 gi|116256445|ref|NP_001070729.1| nuclear receptor (2462) 10967 1326.3 0 gi|119618859|gb|EAW98453.1| nuclear receptor co-re (2507) 10967 1326.3 0 gi|62240098|gb|AAX77219.1| SMRTE-tau [Homo sapiens (2461) 10901 1318.4 0 gi|4559298|gb|AAD22973.1|AF125672_1 silencing medi (2507) 10901 1318.4 0 gi|109099215|ref|XP_001102669.1| PREDICTED: nuclea (2464) 10809 1307.4 0 gi|109099213|ref|XP_001102940.1| PREDICTED: nuclea (2510) 10809 1307.4 0 gi|225356512|gb|AAI56550.1| Nuclear receptor co-re (2507) 10624 1285.3 0 gi|62087758|dbj|BAD92326.1| nuclear receptor co-re (1469) 9883 1196.5 0 gi|119618855|gb|EAW98449.1| nuclear receptor co-re (2550) 8810 1068.5 0 gi|1045655|gb|AAC50236.1| silencing mediator of re (1495) 8774 1063.9 0 gi|148687620|gb|EDL19567.1| nuclear receptor co-re (2500) 6633 808.3 0 gi|148687618|gb|EDL19565.1| nuclear receptor co-re (2468) 6607 805.2 0 gi|149063239|gb|EDM13562.1| nuclear receptor co-re (2472) 6542 797.4 0 gi|4454548|gb|AAD20944.1| silencing mediator of re (2473) 6477 789.6 0 gi|12643930|sp|Q9WU42.2|NCOR2_MOUSE RecName: Full= (2472) 6471 788.9 0 gi|4559296|gb|AAD22972.1|AF125671_1 silencing medi (2462) 6330 772.0 0 gi|149063240|gb|EDM13563.1| nuclear receptor co-re (2253) 4956 607.8 5.6e-170 gi|118098434|ref|XP_415107.2| PREDICTED: similar t (2483) 4665 573.0 1.8e-159 gi|224071079|ref|XP_002189144.1| PREDICTED: simila (2459) 4260 524.6 6.6e-145 gi|1911770|gb|AAB50847.1| T3 receptor-associating ( 769) 4234 520.9 2.7e-144 gi|73995134|ref|XP_853085.1| PREDICTED: similar to (2589) 4066 501.5 6.5e-138 gi|148687619|gb|EDL19566.1| nuclear receptor co-re (2253) 3209 398.9 4.1e-107 gi|47213495|emb|CAF91071.1| unnamed protein produc (2585) 3168 394.1 1.3e-105 gi|12643781|sp|Q60974.1|NCOR1_MOUSE RecName: Full= (2453) 3114 387.6 1.1e-103 gi|148678396|gb|EDL10343.1| nuclear receptor co-re (2452) 3108 386.9 1.9e-103 gi|73955952|ref|XP_851485.1| PREDICTED: similar to (2453) 3108 386.9 1.9e-103 gi|4454550|gb|AAD20945.1| silencing mediator of re (2253) 3103 386.3 2.7e-103 gi|56207225|emb|CAI24057.1| nuclear receptor co-re (2454) 3068 382.1 5.1e-102 gi|109490961|ref|XP_001077495.1| PREDICTED: simila (2468) 3067 382.0 5.6e-102 gi|149052886|gb|EDM04703.1| nuclear receptor co-re (2467) 3062 381.4 8.4e-102 gi|194674349|ref|XP_618370.4| PREDICTED: similar t ( 875) 3001 373.6 6.9e-100 gi|149641752|ref|XP_001509246.1| PREDICTED: simila (2469) 2964 369.7 2.8e-98 gi|85541753|sp|Q4KKX4.1|NCOR1_XENTR RecName: Full= (2494) 2905 362.7 3.8e-96 gi|149052887|gb|EDM04704.1| nuclear receptor co-re (2405) 2886 360.4 1.8e-95 gi|3510603|gb|AAC33550.1| nuclear receptor co-repr (2440) 2870 358.5 6.8e-95 gi|73955940|ref|XP_863704.1| PREDICTED: similar to (2437) 2869 358.3 7.4e-95 gi|47117817|sp|O75376.2|NCOR1_HUMAN RecName: Full= (2440) 2868 358.2 8e-95 gi|56207226|emb|CAI24058.1| nuclear receptor co-re (2335) 2865 357.8 1e-94 gi|119624899|gb|EAX04494.1| nuclear receptor co-re (2337) 2860 357.2 1.5e-94 >>gi|208965294|dbj|BAG72661.1| nuclear receptor co-repre (2450 aa) initn: 16601 init1: 16601 opt: 16601 Z-score: 10731.3 bits: 1999.8 E(): 0 Smith-Waterman score: 16601; 100.000% identity (100.000% similar) in 2450 aa overlap (19-2468:1-2450) 10 20 30 40 50 60 ef0051 LRESLLGPGSSSPPTPTTMSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY :::::::::::::::::::::::::::::::::::::::::: gi|208 MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY 10 20 30 40 70 80 90 100 110 120 ef0051 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF 50 60 70 80 90 100 130 140 150 160 170 180 ef0051 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL 110 120 130 140 150 160 190 200 210 220 230 240 ef0051 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK 170 180 190 200 210 220 250 260 270 280 290 300 ef0051 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL 230 240 250 260 270 280 310 320 330 340 350 360 ef0051 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK 290 300 310 320 330 340 370 380 390 400 410 420 ef0051 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA 350 360 370 380 390 400 430 440 450 460 470 480 ef0051 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT 410 420 430 440 450 460 490 500 510 520 530 540 ef0051 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDE 470 480 490 500 510 520 550 560 570 580 590 600 ef0051 KEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 KEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRI 530 540 550 560 570 580 610 620 630 640 650 660 ef0051 TRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 TRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG 590 600 610 620 630 640 670 680 690 700 710 720 ef0051 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVED 650 660 670 680 690 700 730 740 750 760 770 780 ef0051 EEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 EEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDT 710 720 730 740 750 760 790 800 810 820 830 840 ef0051 GQNGPKPPATLGADGPPPEPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 GQNGPKPPATLGADGPPPEPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVV 770 780 790 800 810 820 850 860 870 880 890 900 ef0051 PKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 PKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEA 830 840 850 860 870 880 910 920 930 940 950 960 ef0051 AEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 AEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRP 890 900 910 920 930 940 970 980 990 1000 1010 1020 ef0051 SLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 SLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPP 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 ef0051 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLP 1010 1020 1030 1040 1050 1060 1090 1100 1110 1120 1130 1140 ef0051 FPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 FPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKH 1070 1080 1090 1100 1110 1120 1150 1160 1170 1180 1190 1200 ef0051 PSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 PSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSP 1130 1140 1150 1160 1170 1180 1210 1220 1230 1240 1250 1260 ef0051 RGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 RGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTP 1190 1200 1210 1220 1230 1240 1270 1280 1290 1300 1310 1320 ef0051 ADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 ADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDG 1250 1260 1270 1280 1290 1300 1330 1340 1350 1360 1370 1380 ef0051 RSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 RSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGS 1310 1320 1330 1340 1350 1360 1390 1400 1410 1420 1430 1440 ef0051 ITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 ITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGL 1370 1380 1390 1400 1410 1420 1450 1460 1470 1480 1490 1500 ef0051 VATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 VATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVR 1430 1440 1450 1460 1470 1480 1510 1520 1530 1540 1550 1560 ef0051 SLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 SLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELG 1490 1500 1510 1520 1530 1540 1570 1580 1590 1600 1610 1620 ef0051 KPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 KPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAK 1550 1560 1570 1580 1590 1600 1630 1640 1650 1660 1670 1680 ef0051 SPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 SPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRH 1610 1620 1630 1640 1650 1660 1690 1700 1710 1720 1730 1740 ef0051 LAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 LAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLS 1670 1680 1690 1700 1710 1720 1750 1760 1770 1780 1790 1800 ef0051 PRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 PRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSS 1730 1740 1750 1760 1770 1780 1810 1820 1830 1840 1850 1860 ef0051 SPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 SPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQS 1790 1800 1810 1820 1830 1840 1870 1880 1890 1900 1910 1920 ef0051 SGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 SGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPST 1850 1860 1870 1880 1890 1900 1930 1940 1950 1960 1970 1980 ef0051 PTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 PTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRAD 1910 1920 1930 1940 1950 1960 1990 2000 2010 2020 2030 2040 ef0051 TGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 TGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAP 1970 1980 1990 2000 2010 2020 2050 2060 2070 2080 2090 2100 ef0051 PASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 PASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHL 2030 2040 2050 2060 2070 2080 2110 2120 2130 2140 2150 2160 ef0051 EELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 EELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVT 2090 2100 2110 2120 2130 2140 2170 2180 2190 2200 2210 2220 ef0051 LAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 LAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPA 2150 2160 2170 2180 2190 2200 2230 2240 2250 2260 2270 2280 ef0051 RGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 RGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEP 2210 2220 2230 2240 2250 2260 2290 2300 2310 2320 2330 2340 ef0051 SRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 SRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIF 2270 2280 2290 2300 2310 2320 2350 2360 2370 2380 2390 2400 ef0051 NMPAITGTGGGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVHSEGDCNRRTPLTNRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 NMPAITGTGGGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVHSEGDCNRRTPLTNRV 2330 2340 2350 2360 2370 2380 2410 2420 2430 2440 2450 2460 ef0051 WEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGPHHAWDEEPKPLLCSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 WEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGPHHAWDEEPKPLLCSQ 2390 2400 2410 2420 2430 2440 ef0051 YETLSDSE :::::::: gi|208 YETLSDSE 2450 >>gi|226713806|sp|Q9Y618.2|NCOR2_HUMAN RecName: Full=Nuc (2525 aa) initn: 15747 init1: 15747 opt: 15747 Z-score: 10179.5 bits: 1897.7 E(): 0 Smith-Waterman score: 16432; 96.990% identity (96.990% similar) in 2525 aa overlap (19-2468:1-2525) 10 20 30 40 50 60 ef0051 LRESLLGPGSSSPPTPTTMSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY :::::::::::::::::::::::::::::::::::::::::: gi|226 MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY 10 20 30 40 70 80 90 100 110 120 ef0051 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF 50 60 70 80 90 100 130 140 150 160 170 180 ef0051 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL 110 120 130 140 150 160 190 200 210 220 230 240 ef0051 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK 170 180 190 200 210 220 250 260 270 280 290 300 ef0051 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL 230 240 250 260 270 280 310 320 330 340 350 360 ef0051 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK 290 300 310 320 330 340 370 380 390 400 410 420 ef0051 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA 350 360 370 380 390 400 430 440 450 460 470 480 ef0051 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT 410 420 430 440 450 460 490 500 510 520 530 540 ef0051 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDE 470 480 490 500 510 520 550 560 570 580 590 600 ef0051 KEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 KEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRI 530 540 550 560 570 580 610 620 630 640 650 660 ef0051 TRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 TRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG 590 600 610 620 630 640 670 680 690 700 710 720 ef0051 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVED 650 660 670 680 690 700 730 740 750 760 770 780 ef0051 EEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 EEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDT 710 720 730 740 750 760 790 800 810 820 830 840 ef0051 GQNGPKPPATLGADGPPPEPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVV :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: gi|226 GQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVV 770 780 790 800 810 820 850 860 870 880 890 900 ef0051 PKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 PKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEA 830 840 850 860 870 880 910 920 930 940 950 960 ef0051 AEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 AEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRP 890 900 910 920 930 940 970 980 990 1000 1010 1020 ef0051 SLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 SLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPP 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 ef0051 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLP 1010 1020 1030 1040 1050 1060 1090 1100 1110 1120 1130 1140 ef0051 FPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 FPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKH 1070 1080 1090 1100 1110 1120 1150 1160 1170 1180 1190 1200 ef0051 PSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 PSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSP 1130 1140 1150 1160 1170 1180 1210 1220 1230 1240 1250 1260 ef0051 RGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 RGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTP 1190 1200 1210 1220 1230 1240 1270 1280 1290 1300 1310 1320 ef0051 ADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 ADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDG 1250 1260 1270 1280 1290 1300 1330 1340 1350 1360 1370 1380 ef0051 RSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 RSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGS 1310 1320 1330 1340 1350 1360 1390 1400 1410 1420 1430 1440 ef0051 ITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 ITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGL 1370 1380 1390 1400 1410 1420 1450 1460 1470 1480 1490 1500 ef0051 VATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 VATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVR 1430 1440 1450 1460 1470 1480 1510 1520 1530 1540 1550 1560 ef0051 SLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 SLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELG 1490 1500 1510 1520 1530 1540 1570 1580 1590 1600 1610 1620 ef0051 KPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 KPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAK 1550 1560 1570 1580 1590 1600 1630 1640 1650 1660 1670 1680 ef0051 SPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 SPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRH 1610 1620 1630 1640 1650 1660 1690 1700 1710 1720 1730 1740 ef0051 LAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 LAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLS 1670 1680 1690 1700 1710 1720 1750 1760 1770 1780 1790 1800 ef0051 PRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 PRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSS 1730 1740 1750 1760 1770 1780 1810 1820 1830 1840 1850 1860 ef0051 SPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 SPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQS 1790 1800 1810 1820 1830 1840 1870 1880 1890 1900 1910 1920 ef0051 SGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 SGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPST 1850 1860 1870 1880 1890 1900 1930 1940 1950 1960 1970 1980 ef0051 PTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 PTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRAD 1910 1920 1930 1940 1950 1960 1990 2000 2010 2020 2030 2040 ef0051 TGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 TGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAP 1970 1980 1990 2000 2010 2020 2050 2060 2070 2080 2090 2100 ef0051 PASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 PASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHL 2030 2040 2050 2060 2070 2080 2110 2120 2130 2140 2150 2160 ef0051 EELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 EELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVT 2090 2100 2110 2120 2130 2140 2170 2180 2190 2200 2210 2220 ef0051 LAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 LAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPA 2150 2160 2170 2180 2190 2200 2230 2240 2250 2260 2270 2280 ef0051 RGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 RGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEP 2210 2220 2230 2240 2250 2260 2290 2300 2310 2320 2330 2340 ef0051 SRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 SRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIF 2270 2280 2290 2300 2310 2320 ef0051 NMPAITGTG--------------------------------------------------- ::::::::: gi|226 NMPAITGTGLMTYRSQAVQEHASTNMGLEAIIRKALMGKYDQWEESPPLSANAFNPLNAS 2330 2340 2350 2360 2370 2380 2350 2360 2370 2380 ef0051 ------------------------GGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVH :::::::::::::::::::::::::::::::::::: gi|226 ASLPAAMPITAADGRSDHTLTSPGGGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVH 2390 2400 2410 2420 2430 2440 2390 2400 2410 2420 2430 2440 ef0051 SEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 SEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGP 2450 2460 2470 2480 2490 2500 2450 2460 ef0051 HHAWDEEPKPLLCSQYETLSDSE ::::::::::::::::::::::: gi|226 HHAWDEEPKPLLCSQYETLSDSE 2510 2520 >>gi|116256453|ref|NP_006303.3| nuclear receptor co-repr (2524 aa) initn: 9462 init1: 9462 opt: 15728 Z-score: 10167.2 bits: 1895.4 E(): 0 Smith-Waterman score: 16413; 96.950% identity (96.950% similar) in 2525 aa overlap (19-2468:1-2524) 10 20 30 40 50 60 ef0051 LRESLLGPGSSSPPTPTTMSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY :::::::::::::::::::::::::::::::::::::::::: gi|116 MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY 10 20 30 40 70 80 90 100 110 120 ef0051 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF 50 60 70 80 90 100 130 140 150 160 170 180 ef0051 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL 110 120 130 140 150 160 190 200 210 220 230 240 ef0051 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK 170 180 190 200 210 220 250 260 270 280 290 300 ef0051 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL 230 240 250 260 270 280 310 320 330 340 350 360 ef0051 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK 290 300 310 320 330 340 370 380 390 400 410 420 ef0051 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA 350 360 370 380 390 400 430 440 450 460 470 480 ef0051 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT 410 420 430 440 450 460 490 500 510 520 530 540 ef0051 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDE 470 480 490 500 510 520 550 560 570 580 590 600 ef0051 KEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 KEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRI 530 540 550 560 570 580 610 620 630 640 650 660 ef0051 TRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 TRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG 590 600 610 620 630 640 670 680 690 700 710 720 ef0051 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVED 650 660 670 680 690 700 730 740 750 760 770 780 ef0051 EEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 EEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDT 710 720 730 740 750 760 790 800 810 820 830 840 ef0051 GQNGPKPPATLGADGPPPEPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVV :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: gi|116 GQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVV 770 780 790 800 810 820 850 860 870 880 890 900 ef0051 PKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 PKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEA 830 840 850 860 870 880 910 920 930 940 950 960 ef0051 AEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 AEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRP 890 900 910 920 930 940 970 980 990 1000 1010 1020 ef0051 SLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPP :::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::: gi|116 SLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPI-VTKVHEPPREDAAPTKPAPPAPPPP 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 ef0051 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLP 1010 1020 1030 1040 1050 1060 1090 1100 1110 1120 1130 1140 ef0051 FPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 FPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKH 1070 1080 1090 1100 1110 1120 1150 1160 1170 1180 1190 1200 ef0051 PSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 PSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSP 1130 1140 1150 1160 1170 1180 1210 1220 1230 1240 1250 1260 ef0051 RGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 RGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTP 1190 1200 1210 1220 1230 1240 1270 1280 1290 1300 1310 1320 ef0051 ADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 ADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDG 1250 1260 1270 1280 1290 1300 1330 1340 1350 1360 1370 1380 ef0051 RSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 RSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGS 1310 1320 1330 1340 1350 1360 1390 1400 1410 1420 1430 1440 ef0051 ITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 ITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGL 1370 1380 1390 1400 1410 1420 1450 1460 1470 1480 1490 1500 ef0051 VATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 VATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVR 1430 1440 1450 1460 1470 1480 1510 1520 1530 1540 1550 1560 ef0051 SLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 SLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELG 1490 1500 1510 1520 1530 1540 1570 1580 1590 1600 1610 1620 ef0051 KPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 KPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAK 1550 1560 1570 1580 1590 1600 1630 1640 1650 1660 1670 1680 ef0051 SPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 SPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRH 1610 1620 1630 1640 1650 1660 1690 1700 1710 1720 1730 1740 ef0051 LAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 LAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLS 1670 1680 1690 1700 1710 1720 1750 1760 1770 1780 1790 1800 ef0051 PRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 PRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSS 1730 1740 1750 1760 1770 1780 1810 1820 1830 1840 1850 1860 ef0051 SPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 SPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQS 1790 1800 1810 1820 1830 1840 1870 1880 1890 1900 1910 1920 ef0051 SGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 SGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPST 1850 1860 1870 1880 1890 1900 1930 1940 1950 1960 1970 1980 ef0051 PTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 PTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRAD 1910 1920 1930 1940 1950 1960 1990 2000 2010 2020 2030 2040 ef0051 TGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 TGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAP 1970 1980 1990 2000 2010 2020 2050 2060 2070 2080 2090 2100 ef0051 PASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 PASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHL 2030 2040 2050 2060 2070 2080 2110 2120 2130 2140 2150 2160 ef0051 EELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 EELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVT 2090 2100 2110 2120 2130 2140 2170 2180 2190 2200 2210 2220 ef0051 LAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 LAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPA 2150 2160 2170 2180 2190 2200 2230 2240 2250 2260 2270 2280 ef0051 RGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 RGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEP 2210 2220 2230 2240 2250 2260 2290 2300 2310 2320 2330 2340 ef0051 SRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 SRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIF 2270 2280 2290 2300 2310 2320 ef0051 NMPAITGTG--------------------------------------------------- ::::::::: gi|116 NMPAITGTGLMTYRSQAVQEHASTNMGLEAIIRKALMGKYDQWEESPPLSANAFNPLNAS 2330 2340 2350 2360 2370 2380 2350 2360 2370 2380 ef0051 ------------------------GGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVH :::::::::::::::::::::::::::::::::::: gi|116 ASLPAAMPITAADGRSDHTLTSPGGGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVH 2390 2400 2410 2420 2430 2440 2390 2400 2410 2420 2430 2440 ef0051 SEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 SEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGP 2450 2460 2470 2480 2490 2500 2450 2460 ef0051 HHAWDEEPKPLLCSQYETLSDSE ::::::::::::::::::::::: gi|116 HHAWDEEPKPLLCSQYETLSDSE 2510 2520 >>gi|119618854|gb|EAW98448.1| nuclear receptor co-repres (2471 aa) initn: 8815 init1: 8815 opt: 15663 Z-score: 10125.3 bits: 1887.6 E(): 0 Smith-Waterman score: 16440; 98.467% identity (98.467% similar) in 2479 aa overlap (19-2468:1-2471) 10 20 30 40 50 60 ef0051 LRESLLGPGSSSPPTPTTMSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY :::::::::::::::::::::::::::::::::::::::::: gi|119 MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY 10 20 30 40 70 80 90 100 110 120 ef0051 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF 50 60 70 80 90 100 130 140 150 160 170 180 ef0051 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL 110 120 130 140 150 160 190 200 210 220 230 240 ef0051 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK 170 180 190 200 210 220 250 260 270 280 290 300 ef0051 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL 230 240 250 260 270 280 310 320 330 340 350 360 ef0051 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK 290 300 310 320 330 340 370 380 390 400 410 420 ef0051 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA 350 360 370 380 390 400 430 440 450 460 470 480 ef0051 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT 410 420 430 440 450 460 490 500 510 520 530 540 ef0051 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDE 470 480 490 500 510 520 550 560 570 580 590 600 ef0051 KEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRI 530 540 550 560 570 580 610 620 630 640 650 660 ef0051 TRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG 590 600 610 620 630 640 670 680 690 700 710 720 ef0051 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVED 650 660 670 680 690 700 730 740 750 760 770 780 ef0051 EEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDT 710 720 730 740 750 760 790 800 810 820 830 840 ef0051 GQNGPKPPATLGADGPPPEPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVV :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: gi|119 GQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVV 770 780 790 800 810 820 850 860 870 880 890 900 ef0051 PKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEA 830 840 850 860 870 880 910 920 930 940 950 960 ef0051 AEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRP 890 900 910 920 930 940 970 980 990 1000 1010 1020 ef0051 SLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPP 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 ef0051 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLP ::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|119 QNLQPESDAPQQPGSSPRGKSRSPAPPADKE--------AFAAEAQKLPGDPPCWTSGLP 1010 1020 1030 1040 1050 1090 1100 1110 1120 1130 1140 ef0051 FPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKH 1060 1070 1080 1090 1100 1110 1150 1160 1170 1180 1190 1200 ef0051 PSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSP 1120 1130 1140 1150 1160 1170 1210 1220 1230 1240 1250 1260 ef0051 RGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTP 1180 1190 1200 1210 1220 1230 1270 1280 1290 1300 1310 1320 ef0051 ADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDG 1240 1250 1260 1270 1280 1290 1330 1340 1350 1360 1370 1380 ef0051 RSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGS 1300 1310 1320 1330 1340 1350 1390 1400 1410 1420 1430 1440 ef0051 ITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGL 1360 1370 1380 1390 1400 1410 1450 1460 1470 1480 1490 1500 ef0051 VATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVR 1420 1430 1440 1450 1460 1470 1510 1520 1530 1540 1550 1560 ef0051 SLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELG 1480 1490 1500 1510 1520 1530 1570 1580 1590 1600 1610 1620 ef0051 KPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAK 1540 1550 1560 1570 1580 1590 1630 1640 1650 1660 1670 1680 ef0051 SPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRH 1600 1610 1620 1630 1640 1650 1690 1700 1710 1720 1730 1740 ef0051 LAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLS 1660 1670 1680 1690 1700 1710 1750 1760 1770 1780 1790 1800 ef0051 PRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSS 1720 1730 1740 1750 1760 1770 1810 1820 1830 1840 1850 1860 ef0051 SPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQS 1780 1790 1800 1810 1820 1830 1870 1880 1890 1900 1910 1920 ef0051 SGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPST 1840 1850 1860 1870 1880 1890 1930 1940 1950 1960 1970 1980 ef0051 PTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRAD 1900 1910 1920 1930 1940 1950 1990 2000 2010 2020 2030 2040 ef0051 TGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAP 1960 1970 1980 1990 2000 2010 2050 2060 2070 2080 2090 2100 ef0051 PASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHL 2020 2030 2040 2050 2060 2070 2110 2120 2130 2140 2150 2160 ef0051 EELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVT 2080 2090 2100 2110 2120 2130 2170 2180 2190 2200 2210 2220 ef0051 LAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPA 2140 2150 2160 2170 2180 2190 2230 2240 2250 2260 2270 2280 ef0051 RGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEP 2200 2210 2220 2230 2240 2250 2290 2300 2310 2320 2330 2340 ef0051 SRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIF 2260 2270 2280 2290 2300 2310 2350 2360 2370 ef0051 NMPAITGTG-----------------------------GGGKAKVSGRPSSRKAKSPAPG ::::::::: :::::::::::::::::::::: gi|119 NMPAITGTGLMTYRSQAVQEHASTNMGLEAIIRKALMGGGGKAKVSGRPSSRKAKSPAPG 2320 2330 2340 2350 2360 2370 2380 2390 2400 2410 2420 2430 ef0051 LASGDRPPSVSSVHSEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LASGDRPPSVSSVHSEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPP 2380 2390 2400 2410 2420 2430 2440 2450 2460 ef0051 PPGLPAGSGPLAGPHHAWDEEPKPLLCSQYETLSDSE ::::::::::::::::::::::::::::::::::::: gi|119 PPGLPAGSGPLAGPHHAWDEEPKPLLCSQYETLSDSE 2440 2450 2460 2470 >>gi|119618857|gb|EAW98451.1| nuclear receptor co-repres (2517 aa) initn: 8815 init1: 8815 opt: 15663 Z-score: 10125.2 bits: 1887.6 E(): 0 Smith-Waterman score: 16348; 96.673% identity (96.673% similar) in 2525 aa overlap (19-2468:1-2517) 10 20 30 40 50 60 ef0051 LRESLLGPGSSSPPTPTTMSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY :::::::::::::::::::::::::::::::::::::::::: gi|119 MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY 10 20 30 40 70 80 90 100 110 120 ef0051 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF 50 60 70 80 90 100 130 140 150 160 170 180 ef0051 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL 110 120 130 140 150 160 190 200 210 220 230 240 ef0051 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK 170 180 190 200 210 220 250 260 270 280 290 300 ef0051 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL 230 240 250 260 270 280 310 320 330 340 350 360 ef0051 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK 290 300 310 320 330 340 370 380 390 400 410 420 ef0051 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA 350 360 370 380 390 400 430 440 450 460 470 480 ef0051 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT 410 420 430 440 450 460 490 500 510 520 530 540 ef0051 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDE 470 480 490 500 510 520 550 560 570 580 590 600 ef0051 KEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRI 530 540 550 560 570 580 610 620 630 640 650 660 ef0051 TRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG 590 600 610 620 630 640 670 680 690 700 710 720 ef0051 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVED 650 660 670 680 690 700 730 740 750 760 770 780 ef0051 EEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDT 710 720 730 740 750 760 790 800 810 820 830 840 ef0051 GQNGPKPPATLGADGPPPEPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVV :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: gi|119 GQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVV 770 780 790 800 810 820 850 860 870 880 890 900 ef0051 PKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEA 830 840 850 860 870 880 910 920 930 940 950 960 ef0051 AEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRP 890 900 910 920 930 940 970 980 990 1000 1010 1020 ef0051 SLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPP 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 ef0051 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLP ::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|119 QNLQPESDAPQQPGSSPRGKSRSPAPPADKE--------AFAAEAQKLPGDPPCWTSGLP 1010 1020 1030 1040 1050 1090 1100 1110 1120 1130 1140 ef0051 FPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKH 1060 1070 1080 1090 1100 1110 1150 1160 1170 1180 1190 1200 ef0051 PSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSP 1120 1130 1140 1150 1160 1170 1210 1220 1230 1240 1250 1260 ef0051 RGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTP 1180 1190 1200 1210 1220 1230 1270 1280 1290 1300 1310 1320 ef0051 ADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDG 1240 1250 1260 1270 1280 1290 1330 1340 1350 1360 1370 1380 ef0051 RSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGS 1300 1310 1320 1330 1340 1350 1390 1400 1410 1420 1430 1440 ef0051 ITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGL 1360 1370 1380 1390 1400 1410 1450 1460 1470 1480 1490 1500 ef0051 VATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVR 1420 1430 1440 1450 1460 1470 1510 1520 1530 1540 1550 1560 ef0051 SLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELG 1480 1490 1500 1510 1520 1530 1570 1580 1590 1600 1610 1620 ef0051 KPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAK 1540 1550 1560 1570 1580 1590 1630 1640 1650 1660 1670 1680 ef0051 SPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRH 1600 1610 1620 1630 1640 1650 1690 1700 1710 1720 1730 1740 ef0051 LAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLS 1660 1670 1680 1690 1700 1710 1750 1760 1770 1780 1790 1800 ef0051 PRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSS 1720 1730 1740 1750 1760 1770 1810 1820 1830 1840 1850 1860 ef0051 SPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQS 1780 1790 1800 1810 1820 1830 1870 1880 1890 1900 1910 1920 ef0051 SGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPST 1840 1850 1860 1870 1880 1890 1930 1940 1950 1960 1970 1980 ef0051 PTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRAD 1900 1910 1920 1930 1940 1950 1990 2000 2010 2020 2030 2040 ef0051 TGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAP 1960 1970 1980 1990 2000 2010 2050 2060 2070 2080 2090 2100 ef0051 PASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHL 2020 2030 2040 2050 2060 2070 2110 2120 2130 2140 2150 2160 ef0051 EELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVT 2080 2090 2100 2110 2120 2130 2170 2180 2190 2200 2210 2220 ef0051 LAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPA 2140 2150 2160 2170 2180 2190 2230 2240 2250 2260 2270 2280 ef0051 RGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEP 2200 2210 2220 2230 2240 2250 2290 2300 2310 2320 2330 2340 ef0051 SRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIF 2260 2270 2280 2290 2300 2310 ef0051 NMPAITGTG--------------------------------------------------- ::::::::: gi|119 NMPAITGTGLMTYRSQAVQEHASTNMGLEAIIRKALMGKYDQWEESPPLSANAFNPLNAS 2320 2330 2340 2350 2360 2370 2350 2360 2370 2380 ef0051 ------------------------GGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVH :::::::::::::::::::::::::::::::::::: gi|119 ASLPAAMPITAADGRSDHTLTSPGGGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVH 2380 2390 2400 2410 2420 2430 2390 2400 2410 2420 2430 2440 ef0051 SEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGP 2440 2450 2460 2470 2480 2490 2450 2460 ef0051 HHAWDEEPKPLLCSQYETLSDSE ::::::::::::::::::::::: gi|119 HHAWDEEPKPLLCSQYETLSDSE 2500 2510 >>gi|4454552|gb|AAD20946.1| silencing mediator of retino (2517 aa) initn: 8798 init1: 8798 opt: 15555 Z-score: 10055.5 bits: 1874.7 E(): 0 Smith-Waterman score: 16240; 96.198% identity (96.317% similar) in 2525 aa overlap (19-2468:1-2517) 10 20 30 40 50 60 ef0051 LRESLLGPGSSSPPTPTTMSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY :::::: ::::::::::::::::::::::::::::::::::: gi|445 MSGSTQLVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY 10 20 30 40 70 80 90 100 110 120 ef0051 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF 50 60 70 80 90 100 130 140 150 160 170 180 ef0051 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL 110 120 130 140 150 160 190 200 210 220 230 240 ef0051 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK 170 180 190 200 210 220 250 260 270 280 290 300 ef0051 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL 230 240 250 260 270 280 310 320 330 340 350 360 ef0051 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK ::::::::::::.::::::::::::: ::::::::::::::::::::::::::::::::: gi|445 YFKRRNHARKQWKQKFCQRYDQLMEALEKKVERIENNPRRRAKESKVREYYEKQFPEIRK 290 300 310 320 330 340 370 380 390 400 410 420 ef0051 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA 350 360 370 380 390 400 430 440 450 460 470 480 ef0051 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT 410 420 430 440 450 460 490 500 510 520 530 540 ef0051 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDE 470 480 490 500 510 520 550 560 570 580 590 600 ef0051 KEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 KEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRI 530 540 550 560 570 580 610 620 630 640 650 660 ef0051 TRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 TRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG 590 600 610 620 630 640 670 680 690 700 710 720 ef0051 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVED 650 660 670 680 690 700 730 740 750 760 770 780 ef0051 EEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 EEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDT 710 720 730 740 750 760 790 800 810 820 830 840 ef0051 GQNGPKPPATLGADGPPPEPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVV :::::::::::::::::: ::::: . :: :::::::::::::::::::::::::::: gi|445 GQNGPKPPATLGADGPPPGPPTPPRRTSRAPIEPTPASEATGAPTPPPAPPSPSAPPPVV 770 780 790 800 810 820 850 860 870 880 890 900 ef0051 PKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 PKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEA 830 840 850 860 870 880 910 920 930 940 950 960 ef0051 AEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 AEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRP 890 900 910 920 930 940 970 980 990 1000 1010 1020 ef0051 SLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 SLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPP 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 ef0051 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLP ::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|445 QNLQPESDAPQQPGSSPRGKSRSPAPPADKE--------AFAAEAQKLPGDPPCWTSGLP 1010 1020 1030 1040 1050 1090 1100 1110 1120 1130 1140 ef0051 FPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 FPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKH 1060 1070 1080 1090 1100 1110 1150 1160 1170 1180 1190 1200 ef0051 PSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 PSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSP 1120 1130 1140 1150 1160 1170 1210 1220 1230 1240 1250 1260 ef0051 RGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 RGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTP 1180 1190 1200 1210 1220 1230 1270 1280 1290 1300 1310 1320 ef0051 ADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 ADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDG 1240 1250 1260 1270 1280 1290 1330 1340 1350 1360 1370 1380 ef0051 RSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 RSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGS 1300 1310 1320 1330 1340 1350 1390 1400 1410 1420 1430 1440 ef0051 ITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 ITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGL 1360 1370 1380 1390 1400 1410 1450 1460 1470 1480 1490 1500 ef0051 VATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 VATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVR 1420 1430 1440 1450 1460 1470 1510 1520 1530 1540 1550 1560 ef0051 SLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 SLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELG 1480 1490 1500 1510 1520 1530 1570 1580 1590 1600 1610 1620 ef0051 KPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAK ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|445 KPRQSPLTYEDHGAPFAGHLPRGSPVTMREPTPRLQEGSLSSSKASQDRKLTSTPREIAK 1540 1550 1560 1570 1580 1590 1630 1640 1650 1660 1670 1680 ef0051 SPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 SPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRH 1600 1610 1620 1630 1640 1650 1690 1700 1710 1720 1730 1740 ef0051 LAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLS ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|445 LAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNTATAMAQRADMLRGLS 1660 1670 1680 1690 1700 1710 1750 1760 1770 1780 1790 1800 ef0051 PRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 PRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSS 1720 1730 1740 1750 1760 1770 1810 1820 1830 1840 1850 1860 ef0051 SPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 SPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQS 1780 1790 1800 1810 1820 1830 1870 1880 1890 1900 1910 1920 ef0051 SGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPST ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 SGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPSK 1840 1850 1860 1870 1880 1890 1930 1940 1950 1960 1970 1980 ef0051 PTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 PTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRAD 1900 1910 1920 1930 1940 1950 1990 2000 2010 2020 2030 2040 ef0051 TGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 TGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAP 1960 1970 1980 1990 2000 2010 2050 2060 2070 2080 2090 2100 ef0051 PASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 PASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHL 2020 2030 2040 2050 2060 2070 2110 2120 2130 2140 2150 2160 ef0051 EELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 EELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVT 2080 2090 2100 2110 2120 2130 2170 2180 2190 2200 2210 2220 ef0051 LAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 LAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPA 2140 2150 2160 2170 2180 2190 2230 2240 2250 2260 2270 2280 ef0051 RGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 RGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEP 2200 2210 2220 2230 2240 2250 2290 2300 2310 2320 2330 2340 ef0051 SRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 SRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIF 2260 2270 2280 2290 2300 2310 ef0051 NMPAITGTG--------------------------------------------------- ::::::::: gi|445 NMPAITGTGLMTYRSQAVQEHASTNMGLEAIIRKALMGKYDQWEESPPLSANAFNPLNAS 2320 2330 2340 2350 2360 2370 2350 2360 2370 2380 ef0051 ------------------------GGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVH :::::::::::::::::::::::::::::::::::: gi|445 ASLPAAMPITAADGRSDHTLTSPGGGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVH 2380 2390 2400 2410 2420 2430 2390 2400 2410 2420 2430 2440 ef0051 SEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|445 SEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGP 2440 2450 2460 2470 2480 2490 2450 2460 ef0051 HHAWDEEPKPLLCSQYETLSDSE ::::::::::::::::::::::: gi|445 HHAWDEEPKPLLCSQYETLSDSE 2500 2510 >>gi|109099209|ref|XP_001102754.1| PREDICTED: nuclear re (2527 aa) initn: 8959 init1: 8959 opt: 15262 Z-score: 9866.2 bits: 1839.7 E(): 0 Smith-Waterman score: 15947; 94.106% identity (95.886% similar) in 2528 aa overlap (19-2468:1-2527) 10 20 30 40 50 60 ef0051 LRESLLGPGSSSPPTPTTMSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY :::::::::::::::::::::::::::::::::::::::::: gi|109 MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY 10 20 30 40 70 80 90 100 110 120 ef0051 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF 50 60 70 80 90 100 130 140 150 160 170 180 ef0051 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL :::::::::::::::::::::::.:::.:::::::::::::::::::::::::::::::: gi|109 IESKRPRLELLPDPLLRPSPLLAAGQPVGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL 110 120 130 140 150 160 190 200 210 220 230 240 ef0051 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK ::::::::::::::::::::::::::::::::::::::::::::::::::: .:::. : gi|109 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPSQPPPLASM 170 180 190 200 210 220 250 260 270 280 290 300 ef0051 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL : ....::. ::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PSHLSRLVWDEHVKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL 230 240 250 260 270 280 310 320 330 340 350 360 ef0051 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK 290 300 310 320 330 340 370 380 390 400 410 420 ef0051 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA 350 360 370 380 390 400 430 440 450 460 470 480 ef0051 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT 410 420 430 440 450 460 490 500 510 520 530 ef0051 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQ-QQQQQQQPMPRSSQEEKD :::::::::::::::::::::::::::::::::.::: : : :::::::::::::::::: gi|109 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQNQQQPQAQPQQQQQQQPMPRSSQEEKD 470 480 490 500 510 520 540 550 560 570 580 590 ef0051 EKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGR 530 540 550 560 570 580 600 610 620 630 640 650 ef0051 ITRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMV ::::::::::::::::::::::::::::::::::::::::::::.::. ::. . :: . gi|109 ITRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKALLRPGRHLAPTARSL 590 600 610 620 630 640 660 670 680 690 700 710 ef0051 GSKTVSQCKNFY--FNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPV .: .:: : ..: ::. .:::::::::::::::::::::::::::::::::::.::::: gi|109 SSAAVSICVKLYEIFNHTQRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEETAFPPV 650 660 670 680 690 700 720 730 740 750 760 770 ef0051 VEDEEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|109 VEDEEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPRTEAA 710 720 730 740 750 760 780 790 800 810 820 830 ef0051 KDTGQNGPKPPATLGADGPPPEPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPP ::::::::.:::: ..::::::::::::::::::::::::::::: :::::::::::.:: gi|109 KDTGQNGPQPPATQSTDGPPPEPPTPPPEDIPAPTEPTPASEATGPPTPPPAPPSPSVPP 770 780 790 800 810 820 840 850 860 870 880 890 ef0051 PVVPKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKD :::::::::::.::. ::::::::::::::::::::::::::.::::::.:::::::::: gi|109 PVVPKEEKEEEAAAVSPVEEGEEQKPPAAEELAVDTGKAEEPIKSECTEQAEEGPAKGKD 830 840 850 860 870 880 900 910 920 930 940 950 ef0051 AEAAEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLS :::.::::::::::::::::::::::::.:::::::::::::::::::: :::::::::: gi|109 AEASEATAEGALKAEKKEGGSGRATTAKGSGAPQDSDSSATCSADEVDEPEGGDKNRLLS 890 900 910 920 930 940 960 970 980 990 1000 1010 ef0051 PRPSLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PRPSLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAP 950 960 970 980 990 1000 1020 1030 1040 1050 1060 1070 ef0051 PPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTS ::::.:::::::::::::::::::::::: :::: ::::::::::::::::::::::::: gi|109 PPPQHLQPESDAPQQPGSSPRGKSRSPAPAADKE-EKPVFFPAFAAEAQKLPGDPPCWTS 1010 1020 1030 1040 1050 1060 1080 1090 1100 1110 1120 1130 ef0051 GLPFPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GLPFPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISS 1070 1080 1090 1100 1110 1120 1140 1150 1160 1170 1180 1190 ef0051 AKHPSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AKHPSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQ 1130 1140 1150 1160 1170 1180 1200 1210 1220 1230 1240 1250 ef0051 LSPRGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LSPRGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITH 1190 1200 1210 1220 1230 1240 1260 1270 1280 1290 1300 1310 ef0051 GTPADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSK ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|109 GTPADVLYKGTITRIIGEDSPSRLDRSREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSK 1250 1260 1270 1280 1290 1300 1320 1330 1340 1350 1360 1370 ef0051 EDGRSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHI ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|109 EDGRSSSGPPHETAAPKRTYDMMEGRVGRAISSAGIEGLMGRAIPPERHSPHHLKEQHHI 1310 1320 1330 1340 1350 1360 1380 1390 1400 1410 1420 1430 ef0051 RGSITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAH :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|109 RGSITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPPRDLTEAYKTQALGPLKLKPAH 1370 1380 1390 1400 1410 1420 1440 1450 1460 1470 1480 1490 ef0051 EGLVATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKH :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|109 EGLVATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGTSTTGSKKH 1430 1440 1450 1460 1470 1480 1500 1510 1520 1530 1540 1550 ef0051 DVRSLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVP ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|109 DVRSLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTAGSSGGSIARGAPVIVP 1490 1500 1510 1520 1530 1540 1560 1570 1580 1590 1600 1610 ef0051 ELGKPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ELGKPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPRE 1550 1560 1570 1580 1590 1600 1620 1630 1640 1650 1660 1670 ef0051 IAKSPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IAKSPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYL 1610 1620 1630 1640 1650 1660 1680 1690 1700 1710 1720 1730 ef0051 PRHLAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PRHLAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLR 1670 1680 1690 1700 1710 1720 1740 1750 1760 1770 1780 1790 ef0051 GLSPRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GLSPRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSR 1730 1740 1750 1760 1770 1780 1800 1810 1820 1830 1840 1850 ef0051 HSSSPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGT ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|109 HSSSPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSSTTVEHAPIWRPGT 1790 1800 1810 1820 1830 1840 1860 1870 1880 1890 1900 1910 ef0051 EQSSGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EQSSGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVE 1850 1860 1870 1880 1890 1900 1920 1930 1940 1950 1960 1970 ef0051 PSTPTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PSTPTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERP 1910 1920 1930 1940 1950 1960 1980 1990 2000 2010 2020 2030 ef0051 RADTGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDP :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|109 RADTGHAFLAKPPARSGLEPASSPSKGSEPRPLAPPVSGHATIARTPAKNLAPHHASPDP 1970 1980 1990 2000 2010 2020 2040 2050 2060 2070 2080 2090 ef0051 PAPPASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PAPPASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLP 2030 2040 2050 2060 2070 2080 2100 2110 2120 2130 2140 2150 ef0051 KHLEELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQR ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|109 KHLEELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPENQPSSSPLLQTAPGVKGHQR 2090 2100 2110 2120 2130 2140 2160 2170 2180 2190 2200 2210 ef0051 VVTLAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VVTLAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHG 2150 2160 2170 2180 2190 2200 2220 2230 2240 2250 2260 2270 ef0051 APARGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQ :::::::.::::::::::.::::::::::::::::::::.:::::::::::::::::::: gi|109 APARGSPNSEGGKRSPEPSKTSVLGGGEDGIEPVSPPEGVTEPGHSRSAVYPLLYRDGEQ 2210 2220 2230 2240 2250 2260 2280 2290 2300 2310 2320 2330 ef0051 TEPSRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|109 TEPSRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNIGQPGT 2270 2280 2290 2300 2310 2320 2340 ef0051 EIFNMPAITGTG------------------------------------------------ :::::::::::: gi|109 EIFNMPAITGTGLMTYRSQAVQEHASTNMGLEAIIRKALMGKYDQWEESPPLSANAFNPL 2330 2340 2350 2360 2370 2380 2350 2360 2370 2380 ef0051 ---------------------------GGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVS ::::::::::::::::::::::::::::::::: gi|109 NASASLPAAMPITAADGRSDHTLTSPGGGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVS 2390 2400 2410 2420 2430 2440 2390 2400 2410 2420 2430 2440 ef0051 SVHSEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SVHSEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPL 2450 2460 2470 2480 2490 2500 2450 2460 ef0051 AGPHHAWDEEPKPLLCSQYETLSDSE :::::::::::::::::::::::::: gi|109 AGPHHAWDEEPKPLLCSQYETLSDSE 2510 2520 >>gi|109099211|ref|XP_001102847.1| PREDICTED: nuclear re (2520 aa) initn: 8737 init1: 8737 opt: 15195 Z-score: 9822.9 bits: 1831.7 E(): 0 Smith-Waterman score: 15880; 93.829% identity (95.609% similar) in 2528 aa overlap (19-2468:1-2520) 10 20 30 40 50 60 ef0051 LRESLLGPGSSSPPTPTTMSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY :::::::::::::::::::::::::::::::::::::::::: gi|109 MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY 10 20 30 40 70 80 90 100 110 120 ef0051 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF 50 60 70 80 90 100 130 140 150 160 170 180 ef0051 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL :::::::::::::::::::::::.:::.:::::::::::::::::::::::::::::::: gi|109 IESKRPRLELLPDPLLRPSPLLAAGQPVGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL 110 120 130 140 150 160 190 200 210 220 230 240 ef0051 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK ::::::::::::::::::::::::::::::::::::::::::::::::::: .:::. : gi|109 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPSQPPPLASM 170 180 190 200 210 220 250 260 270 280 290 300 ef0051 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL : ....::. ::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PSHLSRLVWDEHVKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL 230 240 250 260 270 280 310 320 330 340 350 360 ef0051 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK 290 300 310 320 330 340 370 380 390 400 410 420 ef0051 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA 350 360 370 380 390 400 430 440 450 460 470 480 ef0051 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT 410 420 430 440 450 460 490 500 510 520 530 ef0051 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQ-QQQQQQQPMPRSSQEEKD :::::::::::::::::::::::::::::::::.::: : : :::::::::::::::::: gi|109 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQNQQQPQAQPQQQQQQQPMPRSSQEEKD 470 480 490 500 510 520 540 550 560 570 580 590 ef0051 EKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGR 530 540 550 560 570 580 600 610 620 630 640 650 ef0051 ITRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMV ::::::::::::::::::::::::::::::::::::::::::::.::. ::. . :: . gi|109 ITRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKALLRPGRHLAPTARSL 590 600 610 620 630 640 660 670 680 690 700 710 ef0051 GSKTVSQCKNFY--FNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPV .: .:: : ..: ::. .:::::::::::::::::::::::::::::::::::.::::: gi|109 SSAAVSICVKLYEIFNHTQRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEETAFPPV 650 660 670 680 690 700 720 730 740 750 760 770 ef0051 VEDEEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|109 VEDEEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPRTEAA 710 720 730 740 750 760 780 790 800 810 820 830 ef0051 KDTGQNGPKPPATLGADGPPPEPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPP ::::::::.:::: ..::::::::::::::::::::::::::::: :::::::::::.:: gi|109 KDTGQNGPQPPATQSTDGPPPEPPTPPPEDIPAPTEPTPASEATGPPTPPPAPPSPSVPP 770 780 790 800 810 820 840 850 860 870 880 890 ef0051 PVVPKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKD :::::::::::.::. ::::::::::::::::::::::::::.::::::.:::::::::: gi|109 PVVPKEEKEEEAAAVSPVEEGEEQKPPAAEELAVDTGKAEEPIKSECTEQAEEGPAKGKD 830 840 850 860 870 880 900 910 920 930 940 950 ef0051 AEAAEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLS :::.::::::::::::::::::::::::.:::::::::::::::::::: :::::::::: gi|109 AEASEATAEGALKAEKKEGGSGRATTAKGSGAPQDSDSSATCSADEVDEPEGGDKNRLLS 890 900 910 920 930 940 960 970 980 990 1000 1010 ef0051 PRPSLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PRPSLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAP 950 960 970 980 990 1000 1020 1030 1040 1050 1060 1070 ef0051 PPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTS ::::.:::::::::::::::::::::::: :::: :::::::::::::::::: gi|109 PPPQHLQPESDAPQQPGSSPRGKSRSPAPAADKE--------AFAAEAQKLPGDPPCWTS 1010 1020 1030 1040 1050 1080 1090 1100 1110 1120 1130 ef0051 GLPFPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GLPFPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISS 1060 1070 1080 1090 1100 1110 1140 1150 1160 1170 1180 1190 ef0051 AKHPSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AKHPSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQ 1120 1130 1140 1150 1160 1170 1200 1210 1220 1230 1240 1250 ef0051 LSPRGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LSPRGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITH 1180 1190 1200 1210 1220 1230 1260 1270 1280 1290 1300 1310 ef0051 GTPADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSK ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|109 GTPADVLYKGTITRIIGEDSPSRLDRSREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSK 1240 1250 1260 1270 1280 1290 1320 1330 1340 1350 1360 1370 ef0051 EDGRSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHI ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|109 EDGRSSSGPPHETAAPKRTYDMMEGRVGRAISSAGIEGLMGRAIPPERHSPHHLKEQHHI 1300 1310 1320 1330 1340 1350 1380 1390 1400 1410 1420 1430 ef0051 RGSITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAH :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|109 RGSITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPPRDLTEAYKTQALGPLKLKPAH 1360 1370 1380 1390 1400 1410 1440 1450 1460 1470 1480 1490 ef0051 EGLVATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKH :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|109 EGLVATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGTSTTGSKKH 1420 1430 1440 1450 1460 1470 1500 1510 1520 1530 1540 1550 ef0051 DVRSLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVP ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|109 DVRSLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTAGSSGGSIARGAPVIVP 1480 1490 1500 1510 1520 1530 1560 1570 1580 1590 1600 1610 ef0051 ELGKPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ELGKPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPRE 1540 1550 1560 1570 1580 1590 1620 1630 1640 1650 1660 1670 ef0051 IAKSPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IAKSPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYL 1600 1610 1620 1630 1640 1650 1680 1690 1700 1710 1720 1730 ef0051 PRHLAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PRHLAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLR 1660 1670 1680 1690 1700 1710 1740 1750 1760 1770 1780 1790 ef0051 GLSPRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GLSPRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSR 1720 1730 1740 1750 1760 1770 1800 1810 1820 1830 1840 1850 ef0051 HSSSPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGT ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|109 HSSSPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSSTTVEHAPIWRPGT 1780 1790 1800 1810 1820 1830 1860 1870 1880 1890 1900 1910 ef0051 EQSSGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EQSSGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVE 1840 1850 1860 1870 1880 1890 1920 1930 1940 1950 1960 1970 ef0051 PSTPTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PSTPTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERP 1900 1910 1920 1930 1940 1950 1980 1990 2000 2010 2020 2030 ef0051 RADTGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDP :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|109 RADTGHAFLAKPPARSGLEPASSPSKGSEPRPLAPPVSGHATIARTPAKNLAPHHASPDP 1960 1970 1980 1990 2000 2010 2040 2050 2060 2070 2080 2090 ef0051 PAPPASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PAPPASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLP 2020 2030 2040 2050 2060 2070 2100 2110 2120 2130 2140 2150 ef0051 KHLEELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQR ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|109 KHLEELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPENQPSSSPLLQTAPGVKGHQR 2080 2090 2100 2110 2120 2130 2160 2170 2180 2190 2200 2210 ef0051 VVTLAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VVTLAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHG 2140 2150 2160 2170 2180 2190 2220 2230 2240 2250 2260 2270 ef0051 APARGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQ :::::::.::::::::::.::::::::::::::::::::.:::::::::::::::::::: gi|109 APARGSPNSEGGKRSPEPSKTSVLGGGEDGIEPVSPPEGVTEPGHSRSAVYPLLYRDGEQ 2200 2210 2220 2230 2240 2250 2280 2290 2300 2310 2320 2330 ef0051 TEPSRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|109 TEPSRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNIGQPGT 2260 2270 2280 2290 2300 2310 2340 ef0051 EIFNMPAITGTG------------------------------------------------ :::::::::::: gi|109 EIFNMPAITGTGLMTYRSQAVQEHASTNMGLEAIIRKALMGKYDQWEESPPLSANAFNPL 2320 2330 2340 2350 2360 2370 2350 2360 2370 2380 ef0051 ---------------------------GGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVS ::::::::::::::::::::::::::::::::: gi|109 NASASLPAAMPITAADGRSDHTLTSPGGGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVS 2380 2390 2400 2410 2420 2430 2390 2400 2410 2420 2430 2440 ef0051 SVHSEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SVHSEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPL 2440 2450 2460 2470 2480 2490 2450 2460 ef0051 AGPHHAWDEEPKPLLCSQYETLSDSE :::::::::::::::::::::::::: gi|109 AGPHHAWDEEPKPLLCSQYETLSDSE 2500 2510 2520 >>gi|99160008|gb|ABF67537.1| nuclear receptor corepresso (2471 aa) initn: 8542 init1: 3381 opt: 13820 Z-score: 8934.7 bits: 1667.3 E(): 0 Smith-Waterman score: 15145; 90.589% identity (95.114% similar) in 2497 aa overlap (19-2468:1-2471) 10 20 30 40 50 60 ef0051 LRESLLGPGSSSPPTPTTMSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY ::::::::::::::::::::::..:::::::: ::::::::: gi|991 MSGSTQPVAQTWRATEPRYPPHGISYPVQIARPHTDVGLLEY 10 20 30 40 70 80 90 100 110 120 ef0051 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF :::::::.:::::::::::::::::::::::::::::::::::::::.::::::.::::: gi|991 QHHSRDYTSHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHAYLPELGQSEMEF 50 60 70 80 90 100 130 140 150 160 170 180 ef0051 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL .:::::::::: :::::::::::.:::.:::::.:::::::::::::::::::.:::::: gi|991 LESKRPRLELLSDPLLRPSPLLAAGQPGGSEDLSKDRSLTGKLEPVSPPSPPHVDPELEL 110 120 130 140 150 160 190 200 210 220 230 240 ef0051 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK 170 180 190 200 210 220 250 260 270 280 290 300 ef0051 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL 230 240 250 260 270 280 310 320 330 340 350 360 ef0051 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK 290 300 310 320 330 340 370 380 390 400 410 420 ef0051 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA 350 360 370 380 390 400 430 440 450 460 470 480 ef0051 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|991 DQQRIKFINMNGLMDDPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT 410 420 430 440 450 460 490 500 510 520 530 540 ef0051 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDE :::::::::::::::::::::::::::::::::::::::::::::: ::::.:::::: gi|991 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQ---MPRSNQEEKDE 470 480 490 500 510 550 560 570 580 590 600 ef0051 KEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRI ::::::::::::::.::::::.:.:::.:::::::::::::::::::::::::::::::: gi|991 KEKEKEAEKEEEKPDVENDKEELIKEKADDTSGEDNDEKEAVASKGRKTANSQGRRKGRI 520 530 540 550 560 570 610 620 630 640 650 660 ef0051 TRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG ::::::::::::..::::::::::::.::::::::::::::::::::::::::::::::: gi|991 TRSMANEANSEETVTPQQSAELASMEMNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG 580 590 600 610 620 630 670 680 690 700 710 720 ef0051 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVED :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|991 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKTPAAASEEAAFPPVVED 640 650 660 670 680 690 730 740 750 760 770 780 ef0051 EEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDT ::::.::::::::::.::::: .:::::::::::::.::::::: gi|991 EEMEVSGVSGNEEEMAEEAEA-----------------AVNNSSDTESIPSPRTEAAKDT 700 710 720 730 740 790 800 810 820 830 ef0051 GQN-GPKPPATLGADGPPPEPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPV ::: ::::: . :::.:::::::::::: :::::: :: ::.: ::::::::::: :::: gi|991 GQNNGPKPPPAPGADAPPPEPPTPPPEDAPAPTEPDPAPEAAGPPTPPPAPPSPSLPPPV 750 760 770 780 790 800 840 850 860 870 880 890 ef0051 VPKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEP--------VKSECTEEA-EE :::::::::. ::: .:::::::: .:.:::.:.::.::: ::::: ::: :: gi|991 VPKEEKEEEAEAAPSAEEGEEQKPSVAQELAADVGKTEEPGDTPPLEPVKSECKEEAAEE 810 820 830 840 850 860 900 910 920 930 940 ef0051 GPAKGK-DAEA-AEATAEGALKAEKKEGGS--GRATTAKSSGAPQDSDSSATCSADEVDE :: : : .:: :::. :::::.:::::.. :.. :::.:::::::::::::::::::: gi|991 GPDKVKAGTEAVAEAAPEGALKVEKKEGSGPGGKGPTAKGSGAPQDSDSSATCSADEVDE 870 880 890 900 910 920 950 960 970 980 990 1000 ef0051 AEGGDKNRLLSPRPSLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPRED :::::::::::::::::::.: :.::::::::::::::::::::::::::::::::::: gi|991 PEGGDKNRLLSPRPSLLTPTSDARTNASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPRED 930 940 950 960 970 980 1010 1020 1030 1040 1050 1060 ef0051 AAPTKPAPPAPPPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQ .:: :::::::: ::.::::.:.::::..:::::::::.:::.::::::::::::.::.: gi|991 TAPPKPAPPAPPAPQHLQPEGDTPQQPSNSPRGKSRSPVPPAEKEAEKPVFFPAFVAEGQ 990 1000 1010 1020 1030 1040 1070 1080 1090 1100 1110 1120 ef0051 KLPGDPPCWTSGLPFPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPP ::: :: ::::::::::::::::::::::::: :::::::::::::::::.::::::::: gi|991 KLPTDPSCWTSGLPFPVPPREVIKASPHAPDPLAFSYAPPGHPLPLGLHDSARPVLPRPP 1050 1060 1070 1080 1090 1100 1130 1140 1150 1160 1170 1180 ef0051 TISNPPPLISSAKHPSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKK :::::::::::::::::::::.:::::::::::::::::::::::::.:::::: ::::: gi|991 TISNPPPLISSAKHPSVLERQMGAISQGMSVQLHVPYSEHAKAPVGPITMGLPLAMDPKK 1110 1120 1130 1140 1150 1160 1190 1200 1210 1220 1230 1240 ef0051 LAPFSGVKQEQLSPRGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSD :::::::::::::::::::::::::::::::.::::::.::::::::::::.:::::::. gi|991 LAPFSGVKQEQLSPRGQAGPPESLGVPTAQETSVLRGTSLGSVPGGSITKGLPSTRVPSE 1170 1180 1190 1200 1210 1220 1250 1260 1270 1280 1290 1300 ef0051 SAITYRGSITHGTPADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSY : :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|991 SPITYRGSITHGTPADVLYKGTITRIIGEDSPSRLDRGREDGLPKGHVIYEGKKGHVLSY 1230 1240 1250 1260 1270 1280 1310 1320 1330 1340 1350 1360 ef0051 EGGMSVTQCSKEDGRSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERH ::::::.:::::::::::: ::.::::::::::::::.::::::.:::::::::::::: gi|991 EGGMSVSQCSKEDGRSSSGSTHEAAAPKRTYDMMEGRVSRAISSAGIEGLMGRAIPPERH 1290 1300 1310 1320 1330 1340 1370 1380 1390 1400 1410 1420 ef0051 SPHHLKEQHHIRGSITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPS-RDLTEAYKT :::::::::::::::::::::::::::::: :::::::::::::::::: :::.::::. gi|991 SPHHLKEQHHIRGSITQGIPRSYVEAQEDYQRREAKLLKREGTPPPPPPPPRDLAEAYKS 1350 1360 1370 1380 1390 1400 1430 1440 1450 1460 1470 1480 ef0051 ---QALGPLKLKPAHEGLVATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTP .::: ::::::::::::::::::::::::::::.: ::::::::::::::::::::: gi|991 RPLEALGTLKLKPAHEGLVATVKEAGRSIHEIPREEMRPTPELPLAPRPLKEGSITQGTP 1410 1420 1430 1440 1450 1460 1490 1500 1510 1520 1530 1540 ef0051 LKYDTGASTTGSKKHDVRSLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTAS :::::..:.::::::::::.:::::::::::: :: :.::::::::::::::::::.: gi|991 LKYDTSTSSTGSKKHDVRSIIGSPGRTFPPVHLLD---DTRALERACYEESLKSRPGTVS 1470 1480 1490 1500 1510 1550 1560 1570 1580 1590 1600 ef0051 SSGGSIARGAPVIVPELGKPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSS ::::::.:::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|991 SSGGSITRGAPVIVPELGKPRQSPLTYEDHAAPFAGHLPRGSPVTTREPTPRLQEGSLSS 1520 1530 1540 1550 1560 1570 1610 1620 1630 1640 1650 1660 ef0051 SKASQDRKLTSTPREIAKSPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 SKASQDRKLTSTPREIAKSPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTS 1580 1590 1600 1610 1620 1630 1670 1680 1690 1700 1710 1720 ef0051 IPRGIPLDAAAAYYLPRHLAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 IPRGIPLDAAAAYYLPRHLAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMH 1640 1650 1660 1670 1680 1690 1730 1740 1750 1760 1770 1780 ef0051 HNAATAMAQRADMLRGLSPRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|991 HNAATAMAQRADMLRGLSPRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATTMD 1700 1710 1720 1730 1740 1750 1790 1800 1810 1820 1830 1840 ef0051 RLAYLPTAPQPFSSRHSSSPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILT ::.::::::: :::: :::::::::::::::::.::::::::.:::::.: :::::::: gi|991 RLTYLPTAPQHFSSRLSSSPLSPGGPTHLTKPTATSSSERERERDRERER--EREKSILT 1760 1770 1780 1790 1800 1810 1850 1860 1870 1880 1890 1900 ef0051 STTTVEHAPIWRPGTEQSSGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPS :::::::::::::::::.::.::. :::::::::::::::.:::::::::::::.::::: gi|991 STTTVEHAPIWRPGTEQGSGGSGG-GGGGGSSSRPASHSHSHQHSPISPRTQDAIQQRPS 1820 1830 1840 1850 1860 1870 1910 1920 1930 1940 1950 1960 ef0051 VLHNTGMKGIITAVEPSTPTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPV ::::::::::.:.:::::::::::::::::::::::::::::::::: ::::::::.::: gi|991 VLHNTGMKGIVTSVEPSTPTVLRSTSTSSPVRPAATFPPATHCPLGGPLDGVYPTLVEPV 1880 1890 1900 1910 1920 1930 1970 1980 1990 2000 2010 2020 ef0051 LLPKEAPRVARPERPRADTGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIAR :::::: ::::::: :::.::.::::::::.::::::::.::::::::.:: ::::.::: gi|991 LLPKEASRVARPERSRADAGHTFLAKPPARAGLEPASSPGKGSEPRPLAPPGSGHAAIAR 1940 1950 1960 1970 1980 1990 2030 2040 2050 2060 2070 2080 ef0051 TPAKNLAPHHASPDPPAPPASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPV ::::.::::::::: :::::::.: ::::::::::::::::::::::::.::::.::::: gi|991 TPAKSLAPHHASPDQPAPPASAADLHREKTQSKPFSIQELELRSLGYHGGSYSPDGVEPV 2000 2010 2020 2030 2040 2050 2090 2100 2110 2120 2130 2140 ef0051 SPVSSPSLTHDKGLPKHLEELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSS ::::::::::::::::::::::::::::.:: ::::: ::.:: :::::::::::::::: gi|991 SPVSSPSLTHDKGLPKHLEELDKSHLEGDLRHKQPGPGKLSGEPAHLPHLRPLPESQPSS 2060 2070 2080 2090 2100 2110 2150 2160 2170 2180 2190 2200 ef0051 SPLLQTAPGVKGHQRVVTLAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDL ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 SPLLQTTPGVKGHQRVVTLAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDL 2120 2130 2140 2150 2160 2170 2210 2220 2230 2240 2250 2260 ef0051 RRPPSDLYLPPPDHGAPARGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGH ::::::. :::::::::::::::::::::::::.:::.: .::::::::::::::.:::: gi|991 RRPPSDFNLPPPDHGAPARGSPHSEGGKRSPEPSKTSALVSGEDGIEPVSPPEGMAEPGH 2180 2190 2200 2210 2220 2230 2270 2280 2290 2300 2310 2320 ef0051 SRSAVYPLLYRDGEQTEPSRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNT :::.::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|991 PRSAMYPLLYRDGEQAEPSRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNT 2240 2250 2260 2270 2280 2290 2330 2340 2350 ef0051 HNRNEPEYNISQPGTEIFNMPAITGTG-----------------------------GGGK ::::::::::.::::::::::::::.: :::: gi|991 HNRNEPEYNIGQPGTEIFNMPAITGAGLMTCRSQAVQEHASPNMGLEAIIRKALMGGGGK 2300 2310 2320 2330 2340 2350 2360 2370 2380 2390 2400 2410 ef0051 AKVSGRPSSRKAKSPAPGLASGDRPPSVSSVHSEGDCNRRTPLTNRVWEDRPSSAGSTPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 AKVSGRPSSRKAKSPAPGLASGDRPPSVSSVHSEGDCNRRTPLTNRVWEDRPSSAGSTPF 2360 2370 2380 2390 2400 2410 2420 2430 2440 2450 2460 ef0051 PYNPLIMRLQAGVMASPPPPGLPAGSGPLAGPHHAWDEEPKPLLCSQYETLSDSE :::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|991 PYNPLIMRLQAGVMASPPPPGLPTGSGPLAGPHHAWDEEPKPLLCSQYETLSDSE 2420 2430 2440 2450 2460 2470 >>gi|99160033|gb|ABF67538.1| nuclear receptor corepresso (2470 aa) initn: 8935 init1: 3381 opt: 13393 Z-score: 8658.9 bits: 1616.3 E(): 0 Smith-Waterman score: 15128; 90.549% identity (95.074% similar) in 2497 aa overlap (19-2468:1-2470) 10 20 30 40 50 60 ef0051 LRESLLGPGSSSPPTPTTMSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEY ::::::::::::::::::::::..:::::::: ::::::::: gi|991 MSGSTQPVAQTWRATEPRYPPHGISYPVQIARPHTDVGLLEY 10 20 30 40 70 80 90 100 110 120 ef0051 QHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEF :::::::.:::::::::::::::::::::::::::::::::::::::.::::::.::::: gi|991 QHHSRDYTSHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHAYLPELGQSEMEF 50 60 70 80 90 100 130 140 150 160 170 180 ef0051 IESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELEL .:::::::::: :::::::::::.:::.:::::.:::::::::::::::::::.:::::: gi|991 LESKRPRLELLSDPLLRPSPLLAAGQPGGSEDLSKDRSLTGKLEPVSPPSPPHVDPELEL 110 120 130 140 150 160 190 200 210 220 230 240 ef0051 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 VPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESK 170 180 190 200 210 220 250 260 270 280 290 300 ef0051 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 HRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLIL 230 240 250 260 270 280 310 320 330 340 350 360 ef0051 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 YFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRK 290 300 310 320 330 340 370 380 390 400 410 420 ef0051 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 QRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDA 350 360 370 380 390 400 430 440 450 460 470 480 ef0051 DQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|991 DQQRIKFINMNGLMDDPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKT 410 420 430 440 450 460 490 500 510 520 530 540 ef0051 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDE :::::::::::::::::::::::::::::::::::::::::::::: ::::.:::::: gi|991 VAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQ---MPRSNQEEKDE 470 480 490 500 510 550 560 570 580 590 600 ef0051 KEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRI ::::::::::::::.::::::.:.:::.:::::::::::::::::::::::::::::::: gi|991 KEKEKEAEKEEEKPDVENDKEELIKEKADDTSGEDNDEKEAVASKGRKTANSQGRRKGRI 520 530 540 550 560 570 610 620 630 640 650 660 ef0051 TRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG ::::::::::::..::::::::::::.::::::::::::::::::::::::::::::::: gi|991 TRSMANEANSEETVTPQQSAELASMEMNESSRWTEEEMETAKKGLLEHGRNWSAIARMVG 580 590 600 610 620 630 670 680 690 700 710 720 ef0051 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVED :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|991 SKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKTPAAASEEAAFPPVVED 640 650 660 670 680 690 730 740 750 760 770 780 ef0051 EEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDT ::::.::::::::::.::::: .:::::::::::::.::::::: gi|991 EEMEVSGVSGNEEEMAEEAEA-----------------AVNNSSDTESIPSPRTEAAKDT 700 710 720 730 740 790 800 810 820 830 ef0051 GQN-GPKPPATLGADGPPPEPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPV ::: ::::: . :::.:::::::::::: :::::: :: ::.: ::::::::::: :::: gi|991 GQNNGPKPPPAPGADAPPPEPPTPPPEDAPAPTEPDPAPEAAGPPTPPPAPPSPSLPPPV 750 760 770 780 790 800 840 850 860 870 880 890 ef0051 VPKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEP--------VKSECTEEA-EE :::::::::. ::: .:::::::: .:.:::.:.::.::: ::::: ::: :: gi|991 VPKEEKEEEAEAAPSAEEGEEQKPSVAQELAADVGKTEEPGDTPPLEPVKSECKEEAAEE 810 820 830 840 850 860 900 910 920 930 940 ef0051 GPAKGK-DAEA-AEATAEGALKAEKKEGGS--GRATTAKSSGAPQDSDSSATCSADEVDE :: : : .:: :::. :::::.:::::.. :.. :::.:::::::::::::::::::: gi|991 GPDKVKAGTEAVAEAAPEGALKVEKKEGSGPGGKGPTAKGSGAPQDSDSSATCSADEVDE 870 880 890 900 910 920 950 960 970 980 990 1000 ef0051 AEGGDKNRLLSPRPSLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPRED :::::::::::::::::::.: :.::::::::::::::::::::::::::::::::::: gi|991 PEGGDKNRLLSPRPSLLTPTSDARTNASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPRED 930 940 950 960 970 980 1010 1020 1030 1040 1050 1060 ef0051 AAPTKPAPPAPPPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQ .:: :::::::: ::.::::.:.::::..:::::::::.:::.::::::::::::.::.: gi|991 TAPPKPAPPAPPAPQHLQPEGDTPQQPSNSPRGKSRSPVPPAEKEAEKPVFFPAFVAEGQ 990 1000 1010 1020 1030 1040 1070 1080 1090 1100 1110 1120 ef0051 KLPGDPPCWTSGLPFPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPP ::: :: ::::::::::::::::::::::::: :::::::::::::::::.::::::::: gi|991 KLPTDPSCWTSGLPFPVPPREVIKASPHAPDPLAFSYAPPGHPLPLGLHDSARPVLPRPP 1050 1060 1070 1080 1090 1100 1130 1140 1150 1160 1170 1180 ef0051 TISNPPPLISSAKHPSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKK :::::::::::::::::::::.:::::::::::::::::::::::::.:::::: ::::: gi|991 TISNPPPLISSAKHPSVLERQMGAISQGMSVQLHVPYSEHAKAPVGPITMGLPLAMDPKK 1110 1120 1130 1140 1150 1160 1190 1200 1210 1220 1230 1240 ef0051 LAPFSGVKQEQLSPRGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSD :::::::::::::::::::::::::::::::.::::::.::::::::::::.:::::::. gi|991 LAPFSGVKQEQLSPRGQAGPPESLGVPTAQETSVLRGTSLGSVPGGSITKGLPSTRVPSE 1170 1180 1190 1200 1210 1220 1250 1260 1270 1280 1290 1300 ef0051 SAITYRGSITHGTPADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSY : :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|991 SPITYRGSITHGTPADVLYKGTITRIIGEDSPSRLDRGREDGLPKGHVIYEGKKGHVLSY 1230 1240 1250 1260 1270 1280 1310 1320 1330 1340 1350 1360 ef0051 EGGMSVTQCSKEDGRSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERH ::::::.:::::::::::: ::.::::::::::::::.::::::.:::::::::::::: gi|991 EGGMSVSQCSKEDGRSSSGSTHEAAAPKRTYDMMEGRVSRAISSAGIEGLMGRAIPPERH 1290 1300 1310 1320 1330 1340 1370 1380 1390 1400 1410 1420 ef0051 SPHHLKEQHHIRGSITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPS-RDLTEAYKT :::::::::::::::::::::::::::::: :::::::::::::::::: :::.::::. gi|991 SPHHLKEQHHIRGSITQGIPRSYVEAQEDYQRREAKLLKREGTPPPPPPPPRDLAEAYKS 1350 1360 1370 1380 1390 1400 1430 1440 1450 1460 1470 1480 ef0051 ---QALGPLKLKPAHEGLVATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTP .::: ::::::::::::::::::::::::::::.: ::::::::::::::::::::: gi|991 RPLEALGTLKLKPAHEGLVATVKEAGRSIHEIPREEMRPTPELPLAPRPLKEGSITQGTP 1410 1420 1430 1440 1450 1460 1490 1500 1510 1520 1530 1540 ef0051 LKYDTGASTTGSKKHDVRSLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTAS :::::..:.::::::::::.:::::::::::: :: :.::::::::::::::::::.: gi|991 LKYDTSTSSTGSKKHDVRSIIGSPGRTFPPVHLLD---DTRALERACYEESLKSRPGTVS 1470 1480 1490 1500 1510 1550 1560 1570 1580 1590 1600 ef0051 SSGGSIARGAPVIVPELGKPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSS ::::::.:::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|991 SSGGSITRGAPVIVPELGKPRQSPLTYEDHAAPFAGHLPRGSPVTTREPTPRLQEGSLSS 1520 1530 1540 1550 1560 1570 1610 1620 1630 1640 1650 1660 ef0051 SKASQDRKLTSTPREIAKSPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 SKASQDRKLTSTPREIAKSPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTS 1580 1590 1600 1610 1620 1630 1670 1680 1690 1700 1710 1720 ef0051 IPRGIPLDAAAAYYLPRHLAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 IPRGIPLDAAAAYYLPRHLAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMH 1640 1650 1660 1670 1680 1690 1730 1740 1750 1760 1770 1780 ef0051 HNAATAMAQRADMLRGLSPRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|991 HNAATAMAQRADMLRGLSPRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATTMD 1700 1710 1720 1730 1740 1750 1790 1800 1810 1820 1830 1840 ef0051 RLAYLPTAPQPFSSRHSSSPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILT ::.::::::: :::: :::::::::::::::::.::::::::.:::::.: :::::::: gi|991 RLTYLPTAPQHFSSRLSSSPLSPGGPTHLTKPTATSSSERERERDRERER--EREKSILT 1760 1770 1780 1790 1800 1810 1850 1860 1870 1880 1890 1900 ef0051 STTTVEHAPIWRPGTEQSSGSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPS :::::::::::::::::.::.::. :::::::::::::::.:::::::::::::.::::: gi|991 STTTVEHAPIWRPGTEQGSGGSGG-GGGGGSSSRPASHSHSHQHSPISPRTQDAIQQRPS 1820 1830 1840 1850 1860 1870 1910 1920 1930 1940 1950 1960 ef0051 VLHNTGMKGIITAVEPSTPTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPV ::::::::::.:.:::::::::::::::::::::::::::::::::: ::::::::.::: gi|991 VLHNTGMKGIVTSVEPSTPTVLRSTSTSSPVRPAATFPPATHCPLGGPLDGVYPTLVEPV 1880 1890 1900 1910 1920 1930 1970 1980 1990 2000 2010 2020 ef0051 LLPKEAPRVARPERPRADTGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIAR :::::: ::::::: :::.::.::::::::.::::::::.::::::::.:: ::::.::: gi|991 LLPKEASRVARPERSRADAGHTFLAKPPARAGLEPASSPGKGSEPRPLAPPGSGHAAIAR 1940 1950 1960 1970 1980 1990 2030 2040 2050 2060 2070 2080 ef0051 TPAKNLAPHHASPDPPAPPASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPV ::::.::::::::: :::::::.: ::::::::::::::::::::::::.::::.::::: gi|991 TPAKSLAPHHASPDQPAPPASAADLHREKTQSKPFSIQELELRSLGYHGGSYSPDGVEPV 2000 2010 2020 2030 2040 2050 2090 2100 2110 2120 2130 2140 ef0051 SPVSSPSLTHDKGLPKHLEELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSS ::::::::::::::::::::::::::::.:: ::::: ::.:: :::::::::::::::: gi|991 SPVSSPSLTHDKGLPKHLEELDKSHLEGDLRHKQPGPGKLSGEPAHLPHLRPLPESQPSS 2060 2070 2080 2090 2100 2110 2150 2160 2170 2180 2190 2200 ef0051 SPLLQTAPGVKGHQRVVTLAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDL ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 SPLLQTTPGVKGHQRVVTLAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDL 2120 2130 2140 2150 2160 2170 2210 2220 2230 2240 2250 2260 ef0051 RRPPSDLYLPPPDHGAPARGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGH ::::::. :::::::::::::::::::::::::.:::.: .::::::::::::::.:::: gi|991 RRPPSDFNLPPPDHGAPARGSPHSEGGKRSPEPSKTSALVSGEDGIEPVSPPEGMAEPGH 2180 2190 2200 2210 2220 2230 2270 2280 2290 2300 2310 2320 ef0051 SRSAVYPLLYRDGEQTEPSRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNT :::.::::::::::.:: ::::::::::::::::::::::::::::::::::::::::: gi|991 PRSAMYPLLYRDGEQAEP-RMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNT 2240 2250 2260 2270 2280 2290 2330 2340 2350 ef0051 HNRNEPEYNISQPGTEIFNMPAITGTG-----------------------------GGGK ::::::::::.::::::::::::::.: :::: gi|991 HNRNEPEYNIGQPGTEIFNMPAITGAGLMTCRSQAVQEHASPNMGLEAIIRKALMGGGGK 2300 2310 2320 2330 2340 2350 2360 2370 2380 2390 2400 2410 ef0051 AKVSGRPSSRKAKSPAPGLASGDRPPSVSSVHSEGDCNRRTPLTNRVWEDRPSSAGSTPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|991 AKVSGRPSSRKAKSPAPGLASGDRPPSVSSVHSEGDCNRRTPLTNRVWEDRPSSAGSTPF 2360 2370 2380 2390 2400 2410 2420 2430 2440 2450 2460 ef0051 PYNPLIMRLQAGVMASPPPPGLPAGSGPLAGPHHAWDEEPKPLLCSQYETLSDSE :::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|991 PYNPLIMRLQAGVMASPPPPGLPTGSGPLAGPHHAWDEEPKPLLCSQYETLSDSE 2420 2430 2440 2450 2460 2470 2468 residues in 1 query sequences 3124998222 residues in 9136299 library sequences Tcomplib [34.26] (8 proc) start: Tue Jun 30 19:26:11 2009 done: Tue Jun 30 19:30:39 2009 Total Scan time: 2213.960 Total Display time: 3.930 Function used was FASTA [version 34.26.5 April 26, 2007]