hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080808/iprscan-20080808-05184950/chunk_1/iprscan-20080808-05184950.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: ef01094 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF02259.13.fs FAT domain 555.2 2.4e-185 1 PF02259.13.ls FAT domain 556.9 1.9e-164 1 PF00454.17.ls Phosphatidylinositol 3- and 4-kinase 385.2 9e-113 1 PF00454.17.fs Phosphatidylinositol 3- and 4-kinase 383.5 3e-112 1 PF08771.1.fs Rapamycin binding domain 250.9 1.3e-79 1 PF08771.1.ls Rapamycin binding domain 252.9 6.1e-73 1 PF02260.10.fs FATC domain 73.1 3e-20 1 PF02985.12.ls HEAT repeat 75.3 1.8e-19 15 PF02260.10.ls FATC domain 75.1 2e-19 1 PF02985.12.fs HEAT repeat 55.1 1.9e-14 13 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF02259.13.ls 1/1 1547 1944 .. 1 547 [] 556.9 1.9e-164 PF02259.13.fs 1/1 1547 1944 .. 1 547 [] 555.2 2.4e-185 PF08771.1.fs 1/1 2049 2148 .. 1 100 [] 250.9 1.3e-79 PF08771.1.ls 1/1 2049 2148 .. 1 100 [] 252.9 6.1e-73 PF00454.17.ls 1/1 2215 2465 .. 1 329 [] 385.2 9e-113 PF00454.17.fs 1/1 2215 2465 .. 1 329 [] 383.5 3e-112 PF02260.10.fs 1/1 2551 2583 .] 1 33 [] 73.1 3e-20 PF02260.10.ls 1/1 2551 2583 .] 1 33 [] 75.1 2e-19 Alignments of top-scoring domains: PF02259.13.ls: domain 1 of 1, from 1547 to 1944: score 556.9, E = 1.9e-164 *->aplaleAAWrlgqWddqdlmeeylsamklkLLLqGedqSLLtfiddt a++a++AAW+lgqW d+meey+++++ +dt ef01094 1547 ARMAAAAAWGLGQW---DSMEEYTCMIP----------------RDT 1574 pdkeFfkAiLalhksqelsfliilqdlllalkkgeekefdealkyidiyr +d++F++A+Lalh++ f+ a+++id ef01094 1575 HDGAFYRAVLALHQDL----------------------FSLAQQCID--- 1599 eardlldtelsalpgkeSynraYdvlvrlQmLaELeEAsIyaLsTniiny +ardlld el+a++g eSy raY+++v+++mL+ELeE +i+y ef01094 1600 KARDLLDAELTAMAG-ESYSRAYGAMVSCHMLSELEE---------VIQY 1639 kskpgelaslaelrLvmkrllktWrrRLpgvkqddvevWqdiLavRrval k p+++ + +++ W++RL+g+ q+ ve+Wq iL+v ef01094 1640 KLVPERR----------EIIRQIWWERLQGC-QRIVEDWQKILMV----- 1673 slieeklktqsgvtamvderspSqhaplrdpansrlfsIkelLqkSlsdl ef01094 - -------------------------------------------------- - nrslvlgphedaetwlkfArlcRnaeagvseIqleksgLWdkrlslAeka rslv++phed++twlk+A+lc ksg rl lA+k+ ef01094 1674 -RSLVVSPHEDMRTWLKYASLCG------------KSG----RLALAHKT 1706 Llkllgldnsl.pedplprlspsvvyaylKllwqegchrqainelqnyle L llg d+s++ ++plp ++p+v+yay+K++w + +++ ef01094 1707 LVLLLGVDPSRqLDHPLPTVHPQVTYAYMKNMW------------KSARK 1744 Vkaltnlqyftselsaelftlkgkfleqlg.lkeeqlqkeenaytaeqih ++a++++q+f++ + ++ ++ + ++e+q++k+e+++ ef01094 1745 IDAFQHMQHFVQTMQQQAQH---------AiATEDQQHKQELHK------ 1779 lgatysimanalLlARCyLklGeWqkalrqdswne.sidgilqsyaeAte L+ARC+LklGeWq++l+ ++ne++i+++lq+y++Ate ef01094 1780 ------------LMARCFLKLGEWQLNLQ--GINEsTIPKVLQYYSAATE 1815 ldpkwykaWhtwAlhnfEvvsil..........eqeeqQl.akiqeasds +d++wykaWh+wA +nfE+v +++++++ ++++++ +++++a+i++a+++ ef01094 1816 HDRSWYKAWHAWAVMNFEAVLHYkhqnqardekKKLRHASgANITNATTA 1865 aldaqmtsvtskdqqsekldesas...............qseseliseya a++a + ++t ++++s++++e +s+++++++++ +++ ++++s+++ +y ef01094 1866 ATTAATATTTASTEGSNSESEAEStensptpsplqkkvtEDLSKTLLMYT 1915 vpAvegylrSlslgskeslqdtlRLLtLW<-* vpAv+g++rS+sl+++++lqdtlR+LtLW ef01094 1916 VPAVQGFFRSISLSRGNNLQDTLRVLTLW 1944 PF02259.13.fs: domain 1 of 1, from 1547 to 1944: score 555.2, E = 2.4e-185 *->aplaleAAWrlgqWddqdlmeeylsamklkLLLqGedqSLLtfiddt a++a++AAW+lgqW d+meey+++++ +dt ef01094 1547 ARMAAAAAWGLGQW---DSMEEYTCMIP----------------RDT 1574 pdkeFfkAiLalhksqelsfliilqdlllalkkgeekefdealkyidiyr +d++F++A+Lalh++ f+ a+++id ef01094 1575 HDGAFYRAVLALHQDL----------------------FSLAQQCID--- 1599 eardlldtelsalpgkeSynraYdvlvrlQmLaELeEAsIyaLsTniiny +ardlld el+a++g eSy raY+++v+++mL+ELeE +i+y ef01094 1600 KARDLLDAELTAMAG-ESYSRAYGAMVSCHMLSELEE---------VIQY 1639 kskpgelaslaelrLvmkrllktWrrRLpgvkqddvevWqdiLavRrval k p+++ + +++ W++RL+g+ q+ ve+Wq iL+v ef01094 1640 KLVPERR----------EIIRQIWWERLQGC-QRIVEDWQKILMV----- 1673 slieeklktqsgvtamvderspSqhaplrdpansrlfsIkelLqkSlsdl ef01094 - -------------------------------------------------- - nrslvlgphedaetwlkfArlcRnaeagvseIqleksgLWdkrlslAeka rslv++phed++twlk+A+lc ksg rl lA+k+ ef01094 1674 -RSLVVSPHEDMRTWLKYASLCG------------KSG----RLALAHKT 1706 Llkllgldnsl.pedplprlspsvvyaylKllwqegchrqainelqnyle L llg d+s++ ++plp ++p+v+yay+K++w + +++ ef01094 1707 LVLLLGVDPSRqLDHPLPTVHPQVTYAYMKNMW------------KSARK 1744 Vkaltnlqyftselsaelftlkgkfleqlg.lkeeqlqkeenaytaeqih ++a++++q+f++ + ++ ++ + ++e+q++k+e+++ ef01094 1745 IDAFQHMQHFVQTMQQQAQH---------AiATEDQQHKQELHK------ 1779 lgatysimanalLlARCyLklGeWqkalrqdswne.sidgilqsyaeAte L+ARC+LklGeWq++l+ ++ne++i+++lq+y++Ate ef01094 1780 ------------LMARCFLKLGEWQLNLQ--GINEsTIPKVLQYYSAATE 1815 ldpkwykaWhtwAlhnfEvvsil..........eqeeqQl.akiqeasds +d++wykaWh+wA +nfE+v +++++++ ++++++ +++++a+i++a+++ ef01094 1816 HDRSWYKAWHAWAVMNFEAVLHYkhqnqardekKKLRHASgANITNATTA 1865 aldaqmtsvtskdqqsekldesas...............qseseliseya a++a + ++t ++++s++++e +s+++++++++ +++ ++++s+++ +y ef01094 1866 ATTAATATTTASTEGSNSESEAEStensptpsplqkkvtEDLSKTLLMYT 1915 vpAvegylrSlslgskeslqdtlRLLtLW<-* vpAv+g++rS+sl+++++lqdtlR+LtLW ef01094 1916 VPAVQGFFRSISLSRGNNLQDTLRVLTLW 1944 PF08771.1.fs: domain 1 of 1, from 2049 to 2148: score 250.9, E = 1.3e-79 *->ELiRvAILWhElWhegLEeASrqfFgehNvegMfetLePLhemLerG ELiRvAILWhE+WhegLEeASr++Fge+Nv+gMfe+LePLh+m+erG ef01094 2049 ELIRVAILWHEMWHEGLEEASRLYFGERNVKGMFEVLEPLHAMMERG 2095 PeTlrEssFaqafGrdLreArewlqkykstgdeadLnqAWdiYyqVfrrI P+Tl+E+sF qa+GrdL eA+ew++ky ++g+++dL qAWd+Yy+VfrrI ef01094 2096 PQTLKETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFRRI 2145 dkQ<-* +kQ ef01094 2146 SKQ 2148 PF08771.1.ls: domain 1 of 1, from 2049 to 2148: score 252.9, E = 6.1e-73 *->ELiRvAILWhElWhegLEeASrqfFgehNvegMfetLePLhemLerG ELiRvAILWhE+WhegLEeASr++Fge+Nv+gMfe+LePLh+m+erG ef01094 2049 ELIRVAILWHEMWHEGLEEASRLYFGERNVKGMFEVLEPLHAMMERG 2095 PeTlrEssFaqafGrdLreArewlqkykstgdeadLnqAWdiYyqVfrrI P+Tl+E+sF qa+GrdL eA+ew++ky ++g+++dL qAWd+Yy+VfrrI ef01094 2096 PQTLKETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFRRI 2145 dkQ<-* +kQ ef01094 2146 SKQ 2148 PF00454.17.ls: domain 1 of 1, from 2215 to 2465: score 385.2, E = 9e-113 *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq + f++Kg++DLr QDe+v+Ql+ ef01094 2215 EFVFLLKGHEDLR--QDERVMQLF----------------------- 2236 GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil +l+n+ll ++ ++r+nl+++ Y vipl+++sGlI+wvp+++tl+ ++ ef01094 2237 --GLVNTLLANDPTSLRKNLSIQRYAVIPLSTNSGLIGWVPHCDTLHALI 2284 rtymvkkaikdfnksrffkdkkttkkleknakllkehk.llqmvldrkql r y++kk+ + +n+ eh+ +l+m++d+++l ef01094 2285 RDYREKKK-ILLNI---------------------EHRiMLRMAPDYDHL 2312 tllekvevFeeklsntpkpgllqwFvkknpdaapyeewfeRfardnfvrS tl++kvevFe++ +nt +++l ++++ k+p+ e wf+ +r+n++rS ef01094 2313 TLMQKVEVFEHAVNNTAGDDLAKLLWLKSPSS---EVWFD--RRTNYTRS 2357 cAgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgkrg +A+ms+++YiLG+gDRH++N+++ d+ +Gk+ HIDFG+cf+ v++ r+ ef01094 2358 LAVMSMVGYILGLGDRHPSNLML---DRLSGKILHIDFGDCFE-VAMTRE 2403 pkpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeayra ++pe++PFrLTr ++ +am +++g +g +r +c++++++ ef01094 2404 KFPEKIPFRLTR------MLTNAM-------EVTGLDGNYRITCHTVMEV 2440 lRrnanlllnlLkkkAvarGelmledglpdwrs<-* lR+++++++++L e++++d+l++wr ef01094 2441 LREHKDSVMAVL--------EAFVYDPLLNWRL 2465 PF00454.17.fs: domain 1 of 1, from 2215 to 2465: score 383.5, E = 3e-112 *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq + f++Kg++DLr QDe+v+Ql+ ef01094 2215 EFVFLLKGHEDLR--QDERVMQLF----------------------- 2236 GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil +l+n+ll ++ ++r+nl+++ Y vipl+++sGlI+wvp+++tl+ ++ ef01094 2237 --GLVNTLLANDPTSLRKNLSIQRYAVIPLSTNSGLIGWVPHCDTLHALI 2284 rtymvkkaikdfnksrffkdkkttkkleknakllkehk.llqmvldrkql r y++kk+ + +n+ eh+ +l+m++d+++l ef01094 2285 RDYREKKK-ILLNI---------------------EHRiMLRMAPDYDHL 2312 tllekvevFeeklsntpkpgllqwFvkknpdaapyeewfeRfardnfvrS tl++kvevFe++ +nt +++l ++++ k+p+ e wf+ +r+n++rS ef01094 2313 TLMQKVEVFEHAVNNTAGDDLAKLLWLKSPSS---EVWFD--RRTNYTRS 2357 cAgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgkrg +A+ms+++YiLG+gDRH++N+++ d+ +Gk+ HIDFG+cf+ v++ r+ ef01094 2358 LAVMSMVGYILGLGDRHPSNLML---DRLSGKILHIDFGDCFE-VAMTRE 2403 pkpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeayra ++pe++PFrLTr ++ +am +++g +g +r +c++++++ ef01094 2404 KFPEKIPFRLTR------MLTNAM-------EVTGLDGNYRITCHTVMEV 2440 lRrnanlllnlLkkkAvarGelmledglpdwrs<-* lR+++++++++L e++++d+l++wr ef01094 2441 LREHKDSVMAVL--------EAFVYDPLLNWRL 2465 PF02260.10.fs: domain 1 of 1, from 2551 to 2583: score 73.1, E = 3e-20 *->epLsvegqvedLIqqATspenLsqmYiGWcPfl<-* + L+v++qve+LI+qATs+enL+q+YiGWcPf+ ef01094 2551 DTLDVPTQVELLIKQATSHENLCQCYIGWCPFW 2583 PF02260.10.ls: domain 1 of 1, from 2551 to 2583: score 75.1, E = 2e-19 *->epLsvegqvedLIqqATspenLsqmYiGWcPfl<-* + L+v++qve+LI+qATs+enL+q+YiGWcPf+ ef01094 2551 DTLDVPTQVELLIKQATSHENLCQCYIGWCPFW 2583 //