hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-05184950/chunk_1/iprscan-20080808-05184950.nocrc
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Query sequence: ef01094
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00146                                                 417.5   7.3e-121   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00146      1/1    2217  2518 ..     1   336 []   417.5 7.3e-121

Alignments of top-scoring domains:
SM00146: domain 1 of 1, from 2217 to 2518: score 417.5, E = 7.3e-121
                   *->avIfKggDDLRQDalvlQllrlmdklLkkdsetrrldLhlrpYkvlp
                       +++Kg++DLRQD++v+Ql++l+++lL++d  + r +L +++Y+v+p
     ef01094  2217    VFLLKGHEDLRQDERVMQLFGLVNTLLANDPTSLRKNLSIQRYAVIP 2263 

                   tgpksGliEvvpnsetlheIlkelrkkkkipldykqlfmldmlvaeieka
                   ++ +sGli++vp+++tlh + + +r+kkki l++++++ml+m        
     ef01094  2264 LSTNSGLIGWVPHCDTLHALIRDYREKKKILLNIEHRIMLRM-------- 2305 

                   qyptitlakakkkalrykhatlleklkvfegatsafkppvLydwfkekfp
                                a++y+h+tl++k++vfe+a++++ +++L++ ++ k+p
     ef01094  2306 -------------APDYDHLTLMQKVEVFEHAVNNTAGDDLAKLLWLKSP 2342 

                   dpneiyfeardnFtrScAgySvvtYiLGlGDRHndNImldrktGhlfHID
                   ++ e++f++r+n+trS+A++S+v+YiLGlGDRH++N+mldr +G+++HID
     ef01094  2343 SS-EVWFDRRTNYTRSLAVMSMVGYILGLGDRHPSNLMLDRLSGKILHID 2391 

                   FGfilgngpklpgfklfgRErvPFrLTpemvdvmGgGgkpsgvfglFrsl
                   FG++++ ++++++f+    E+ PFrLT+++ ++m+    ++g++g++r +
     ef01094  2392 FGDCFEVAMTREKFP----EKIPFRLTRMLTNAME----VTGLDGNYRIT 2433 

                   CerayralRknsnllmnllelMlsdglmpewrsg.ekdikylrerlrldv
                   C++++++lR++++++m++le++++d+l  +wr ++ +++ + r+r r d+
     ef01094  2434 CHTVMEVLREHKDSVMAVLEAFVYDPL-LNWRLMdTNTKGNKRSRTRTDS 2482 

                   lsdeeaaeyfkktektkliessleslttrlndlfhllaql<-*
                   +s  ++ e  +       +++ ++ +t +++ +  +   +   
     ef01094  2483 YSAGQSVEILDG----VELGEPAHKKTGTTVPESIHSFIG    2518 

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