hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-05593316/chunk_1/iprscan-20080808-05593316.nocrc
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Query sequence: ef01465
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00325                                                 198.1    8.1e-55   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00325    1/1     207   384 ..     1   211 []   198.1  8.1e-55

Alignments of top-scoring domains:
SM00325: domain 1 of 1, from 207 to 384: score 198.1, E = 8.1e-55
                   *->vlkELlqTErnYVrdLkilvevflkpLkkeakssllpllspdevktl
                      +++E+   E++ ++dLk++ + +  p++k +      ++s++e++++
     ef01465   207    AIYEMSRGEQDLIEDLKLARKAYHDPMLKLS------IMSEEELTHI 247  

                   FgpNieeiyefHrrFLdeLeerveewllskdlKsernsviedsgerigdv
                   Fg  +++ + +H+++L ++ e+ +                +  +e+ig++
     ef01465   248 FG-DLDSYIPLHEDLLTRIGEATKP---------------DGTVEQIGHI 281  

                   FlklfsaeeffkiYseYcsnhpdalellkkLmkkkknpaFqkflkeiesk
                   ++ +   ++++++Y  Ycsn+  a++ll++   kk++p++q+fl+++ ++
     ef01465   282 LVSW---LPRLNAYRGYCSNQLAAKALLDQ---KKQDPRVQDFLQRCLES 325  

                   pncrsksearltLeslLikPvQRltkYpLLLkellkhtppdhedredLkk
                   p  r     +l+L+s+L  P  Rl+kYpLLLke+lkhtp++h+d + L++
     ef01465   326 PFSR-----KLDLWSFLDIPRSRLVKYPLLLKEILKHTPKEHPDVQLLED 370  

                   AleaikelasqvNe<-*
                   A+ +i+ ++s++N    
     ef01465   371 AILIIQGVLSDINL    384  

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