hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-06284380/chunk_1/iprscan-20080808-06284380.nocrc
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Query sequence: ef01529
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF03920.5.fs Groucho/TLE N-terminal Q-rich domain           326.1      1e-95   1
PF03920.5.ls Groucho/TLE N-terminal Q-rich domain           328.0    1.5e-95   1
PF00400.22.ls WD domain, G-beta repeat                        63.0    8.7e-16   3
PF00400.22.fs WD domain, G-beta repeat                        57.2    3.8e-15   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF03920.5.ls   1/1      28   163 ..     1   138 []   328.0  1.5e-95
PF03920.5.fs   1/1      28   163 ..     1   138 []   326.1    1e-95
PF00400.22.fs   1/3     501   537 ..     1    38 []    16.1   0.0014
PF00400.22.fs   2/3     557   584 ..    10    38 .]    14.8   0.0033
PF00400.22.ls   3/3     590   628 ..     1    38 []    28.3  2.6e-05
PF00400.22.fs   3/3     590   628 ..     1    38 []    26.3  1.9e-06

Alignments of top-scoring domains:
PF03920.5.ls: domain 1 of 1, from 28 to 163: score 328.0, E = 1.5e-95
                   *->myPqsrrhpaalqapqqgplKftvaesldRiKeEFqfLqaqYHslKl
                      m+Pqsr hp+++qa  q p+Kft++esldRiKeEFqfLqaqYHslKl
     ef01529    28    MFPQSR-HPTPHQAAGQ-PFKFTIPESLDRIKEEFQFLQAQYHSLKL 72   

                   EceKLasEKtEmqRHYvmYYEmsYGLniEmHKqaEivKRLnaiiaqllPf
                   EceKLasEKtEmqRHYvmYYEmsYGLniEmHKq+Ei+KRLn+i+aq++Pf
     ef01529    73 ECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQTEIAKRLNTICAQVIPF 122  

                   LsqeHqqqvlqAveRAKqvtmaELnaiigqqqlqaqqlsha<-*
                   LsqeHqqqv+qAveRAKqvtmaELnaiigqqqlqaq+lsh    
     ef01529   123 LSQEHQQQVAQAVERAKQVTMAELNAIIGQQQLQAQHLSHG    163  

PF03920.5.fs: domain 1 of 1, from 28 to 163: score 326.1, E = 1e-95
                   *->myPqsrrhpaalqapqqgplKftvaesldRiKeEFqfLqaqYHslKl
                      m+Pqsr hp+++qa  q p+Kft++esldRiKeEFqfLqaqYHslKl
     ef01529    28    MFPQSR-HPTPHQAAGQ-PFKFTIPESLDRIKEEFQFLQAQYHSLKL 72   

                   EceKLasEKtEmqRHYvmYYEmsYGLniEmHKqaEivKRLnaiiaqllPf
                   EceKLasEKtEmqRHYvmYYEmsYGLniEmHKq+Ei+KRLn+i+aq++Pf
     ef01529    73 ECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQTEIAKRLNTICAQVIPF 122  

                   LsqeHqqqvlqAveRAKqvtmaELnaiigqqqlqaqqlsha<-*
                   LsqeHqqqv+qAveRAKqvtmaELnaiigqqqlqaq+lsh    
     ef01529   123 LSQEHQQQVAQAVERAKQVTMAELNAIIGQQQLQAQHLSHG    163  

PF00400.22.fs: domain 1 of 3, from 501 to 537: score 16.1, E = 0.0014
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                        ++++l++    V++v +s +  +++ +g+  g++k+Wd   
     ef01529   501    ARQInTLnHG-EVVCAVTISNP-TRHVYTGGK-GCVKVWD    537  

PF00400.22.fs: domain 2 of 3, from 557 to 584: score 14.8, E = 0.0033
                   *->stVtcvafspdsgpllasgSrDgtikiWd<-*
                      + +++++  pd g++l+ g++  t+ iWd   
     ef01529   557    NYIRSCKLLPD-GCTLIVGGEASTLSIWD    584  

PF00400.22.ls: domain 3 of 3, from 590 to 628: score 28.3, E = 2.6e-05
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                         k +l+    +++++a+spd +++++s+++Dg+i +Wd   
     ef01529   590    PRIKaELtSSAPACYALAISPD-SKVCFSCCSDGNIAVWD    628  

PF00400.22.fs: domain 3 of 3, from 590 to 628: score 26.3, E = 1.9e-06
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                         k +l+    +++++a+spd +++++s+++Dg+i +Wd   
     ef01529   590    PRIKaELtSSAPACYALAISPD-SKVCFSCCSDGNIAVWD    628  

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