# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oef01757.fasta.nr -Q ef01757.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ef01757, 419 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6795511 sequences Expectation_n fit: rho(ln(x))= 5.7272+/-0.000213; mu= 6.2919+/- 0.012 mean_var=158.6064+/-29.788, 0's: 32 Z-trim: 164 B-trim: 585 in 2/65 Lambda= 0.101839 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089298|dbj|BAD93093.1| splicing factor, argin ( 419) 2650 401.6 1.5e-109 gi|119628062|gb|EAX07657.1| splicing factor, argin ( 484) 2592 393.2 6.1e-107 gi|119628063|gb|EAX07658.1| splicing factor, argin ( 494) 2592 393.2 6.2e-107 gi|114555168|ref|XP_001154822.1| PREDICTED: simila ( 472) 2582 391.7 1.7e-106 gi|114555162|ref|XP_001155042.1| PREDICTED: splici ( 494) 2582 391.7 1.7e-106 gi|20981726|sp|Q08170|SFRS4_HUMAN Splicing factor, ( 494) 2576 390.8 3.2e-106 gi|30585347|gb|AAP36946.1| Homo sapiens splicing f ( 495) 2576 390.8 3.2e-106 gi|109000271|ref|XP_001113479.1| PREDICTED: splici ( 472) 2563 388.9 1.2e-105 gi|109000265|ref|XP_001113540.1| PREDICTED: splici ( 494) 2563 388.9 1.2e-105 gi|307438|gb|AAA36649.1| pre-mRNA splicing factor ( 494) 2557 388.0 2.2e-105 gi|194207793|ref|XP_001500325.2| PREDICTED: simila ( 527) 2416 367.4 3.9e-99 gi|115371753|gb|ABI96201.1| SFRS4 [Sus scrofa] ( 491) 2294 349.4 9.4e-94 gi|154425888|gb|AAI51319.1| SFRS4 protein [Bos tau ( 493) 2278 347.0 4.8e-93 gi|149024115|gb|EDL80612.1| similar to Sfrs4 prote ( 488) 2177 332.2 1.4e-88 gi|26449170|dbj|BAC36925.1| unnamed protein produc ( 491) 2153 328.7 1.6e-87 gi|122890231|emb|CAM14964.1| splicing factor argin ( 496) 2153 328.7 1.6e-87 gi|20978758|sp|Q8VE97|SFRS4_MOUSE Splicing factor, ( 489) 2133 325.7 1.2e-86 gi|22268151|gb|AAH26944.1| Sfrs4 protein [Mus musc ( 489) 2133 325.7 1.2e-86 gi|73950074|ref|XP_865416.1| PREDICTED: similar to ( 377) 2020 309.0 1.1e-81 gi|126328783|ref|XP_001365267.1| PREDICTED: simila ( 491) 2004 306.8 6.3e-81 gi|62898449|dbj|BAD97164.1| splicing factor, argin ( 382) 1902 291.6 1.8e-76 gi|114555160|ref|XP_001154531.1| PREDICTED: splici ( 406) 1892 290.2 5.1e-76 gi|109000263|ref|XP_001113369.1| PREDICTED: splici ( 406) 1877 288.0 2.3e-75 gi|169642476|gb|AAI60850.1| RGD1561347 protein [Ra ( 349) 1788 274.8 1.8e-71 gi|119628064|gb|EAX07659.1| splicing factor, argin ( 464) 1728 266.2 9.8e-69 gi|114555166|ref|XP_001154989.1| PREDICTED: splici ( 464) 1718 264.7 2.7e-68 gi|109000268|ref|XP_001113510.1| PREDICTED: splici ( 464) 1699 261.9 1.9e-67 gi|7670438|dbj|BAA95070.1| unnamed protein product ( 339) 1682 259.2 8.8e-67 gi|118101604|ref|XP_417747.2| PREDICTED: similar t ( 444) 1491 231.3 2.9e-58 gi|73950072|ref|XP_852284.1| PREDICTED: similar to ( 347) 1438 223.4 5.5e-56 gi|149567497|ref|XP_001512981.1| PREDICTED: simila ( 401) 1281 200.4 5.3e-49 gi|45872604|gb|AAH68213.1| Splicing factor, argini ( 568) 1210 190.2 9e-46 gi|28422195|gb|AAH44265.1| B52-prov protein [Xenop ( 660) 1185 186.6 1.2e-44 gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenop ( 667) 1149 181.3 4.9e-43 gi|114555170|ref|XP_001154879.1| PREDICTED: splici ( 407) 1100 173.8 5.4e-41 gi|47212671|emb|CAF94152.1| unnamed protein produc (1550) 1075 171.0 1.5e-39 gi|170284807|gb|AAI61135.1| Unknown (protein for I ( 428) 1023 162.6 1.4e-37 gi|32822789|gb|AAH55238.1| Zgc:63770 [Danio rerio] ( 347) 986 157.0 5.4e-36 gi|53133810|emb|CAG32234.1| hypothetical protein [ ( 348) 980 156.1 1e-35 gi|28461393|gb|AAH46895.1| Zgc:55809 [Danio rerio] ( 366) 949 151.6 2.4e-34 gi|157888755|emb|CAP09559.1| splicing factor, argi ( 355) 936 149.7 8.9e-34 gi|158255842|dbj|BAF83892.1| unnamed protein produ ( 344) 935 149.5 9.7e-34 gi|20981728|sp|Q13247|SFRS6_HUMAN Splicing factor, ( 344) 930 148.8 1.6e-33 gi|1049088|gb|AAA93073.1| SRp55-1 ( 344) 930 148.8 1.6e-33 gi|30584231|gb|AAP36364.1| Homo sapiens splicing f ( 345) 930 148.8 1.6e-33 gi|115371751|gb|ABI96200.1| SFRS6 [Sus scrofa] ( 345) 930 148.8 1.6e-33 gi|119596372|gb|EAW75966.1| splicing factor, argin ( 383) 930 148.8 1.7e-33 gi|56541079|gb|AAH86820.1| Splicing factor, argini ( 355) 923 147.8 3.4e-33 gi|109092023|ref|XP_001084701.1| PREDICTED: simila ( 303) 922 147.5 3.4e-33 gi|122145041|sp|Q3B7L6|SFRS6_BOVIN Splicing factor ( 345) 922 147.6 3.7e-33 >>gi|62089298|dbj|BAD93093.1| splicing factor, arginine/ (419 aa) initn: 2650 init1: 2650 opt: 2650 Z-score: 2121.7 bits: 401.6 E(): 1.5e-109 Smith-Waterman score: 2650; 100.000% identity (100.000% similar) in 419 aa overlap (1-419:1-419) 10 20 30 40 50 60 ef0175 SYLFEPSKGGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SYLFEPSKGGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADA 10 20 30 40 50 60 70 80 90 100 110 120 ef0175 HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSR 70 80 90 100 110 120 130 140 150 160 170 180 ef0175 SRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKDKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKDKS 130 140 150 160 170 180 190 200 210 220 230 240 ef0175 RSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRG 190 200 210 220 230 240 250 260 270 280 290 300 ef0175 SVSRGRSQEKSLRQSRSRSRSKAGSRSRSRSRSKSKDKRKSRKRSREESRSRSRSRSKSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SVSRGRSQEKSLRQSRSRSRSKAGSRSRSRSRSKSKDKRKSRKRSREESRSRSRSRSKSE 250 260 270 280 290 300 310 320 330 340 350 360 ef0175 RSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAG 310 320 330 340 350 360 370 380 390 400 410 ef0175 TNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSRSHSRS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSRSHSRS 370 380 390 400 410 >>gi|119628062|gb|EAX07657.1| splicing factor, arginine/ (484 aa) initn: 2592 init1: 2592 opt: 2592 Z-score: 2075.0 bits: 393.2 E(): 6.1e-107 Smith-Waterman score: 2592; 99.515% identity (100.000% similar) in 412 aa overlap (8-419:73-484) 10 20 30 ef0175 SYLFEPSKGGYGYRRSGRDKYGPPTRTEYRLIVENLS ..:::::::::::::::::::::::::::: gi|119 YELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 50 60 70 80 90 100 40 50 60 70 80 90 ef0175 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 110 120 130 140 150 160 100 110 120 130 140 150 ef0175 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS 170 180 190 200 210 220 160 170 180 190 200 210 ef0175 RSRSQSRSRSKKEKSRSPSKDKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RSRSQSRSRSKKEKSRSPSKDKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS 230 240 250 260 270 280 220 230 240 250 260 270 ef0175 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKAGSRSRSRSRSKSKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKAGSRSRSRSRSKSKD 290 300 310 320 330 340 280 290 300 310 320 330 ef0175 KRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS 350 360 370 380 390 400 340 350 360 370 380 390 ef0175 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS 410 420 430 440 450 460 400 410 ef0175 KSRSRSASRSPSRSRSRSHSRS :::::::::::::::::::::: gi|119 KSRSRSASRSPSRSRSRSHSRS 470 480 >>gi|119628063|gb|EAX07658.1| splicing factor, arginine/ (494 aa) initn: 2592 init1: 2592 opt: 2592 Z-score: 2074.9 bits: 393.2 E(): 6.2e-107 Smith-Waterman score: 2592; 99.515% identity (100.000% similar) in 412 aa overlap (8-419:83-494) 10 20 30 ef0175 SYLFEPSKGGYGYRRSGRDKYGPPTRTEYRLIVENLS ..:::::::::::::::::::::::::::: gi|119 YELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 60 70 80 90 100 110 40 50 60 70 80 90 ef0175 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 120 130 140 150 160 170 100 110 120 130 140 150 ef0175 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS 180 190 200 210 220 230 160 170 180 190 200 210 ef0175 RSRSQSRSRSKKEKSRSPSKDKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RSRSQSRSRSKKEKSRSPSKDKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS 240 250 260 270 280 290 220 230 240 250 260 270 ef0175 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKAGSRSRSRSRSKSKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKAGSRSRSRSRSKSKD 300 310 320 330 340 350 280 290 300 310 320 330 ef0175 KRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS 360 370 380 390 400 410 340 350 360 370 380 390 ef0175 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS 420 430 440 450 460 470 400 410 ef0175 KSRSRSASRSPSRSRSRSHSRS :::::::::::::::::::::: gi|119 KSRSRSASRSPSRSRSRSHSRS 480 490 >>gi|114555168|ref|XP_001154822.1| PREDICTED: similar to (472 aa) initn: 2582 init1: 2582 opt: 2582 Z-score: 2067.2 bits: 391.7 E(): 1.7e-106 Smith-Waterman score: 2582; 99.029% identity (100.000% similar) in 412 aa overlap (8-419:61-472) 10 20 30 ef0175 SYLFEPSKGGYGYRRSGRDKYGPPTRTEYRLIVENLS ..:::::::::::::::::::::::::::: gi|114 YELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 40 50 60 70 80 90 40 50 60 70 80 90 ef0175 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 100 110 120 130 140 150 100 110 120 130 140 150 ef0175 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS 160 170 180 190 200 210 160 170 180 190 200 210 ef0175 RSRSQSRSRSKKEKSRSPSKDKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RSRSQSRSRSKKEKSRSPSKDKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS 220 230 240 250 260 270 220 230 240 250 260 270 ef0175 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKAGSRSRSRSRSKSKD :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|114 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKD 280 290 300 310 320 330 280 290 300 310 320 330 ef0175 KRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS 340 350 360 370 380 390 340 350 360 370 380 390 ef0175 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS 400 410 420 430 440 450 400 410 ef0175 KSRSRSASRSPSRSRSRSHSRS :::::::::::::::::::::: gi|114 KSRSRSASRSPSRSRSRSHSRS 460 470 >>gi|114555162|ref|XP_001155042.1| PREDICTED: splicing f (494 aa) initn: 2582 init1: 2582 opt: 2582 Z-score: 2067.0 bits: 391.7 E(): 1.7e-106 Smith-Waterman score: 2582; 99.029% identity (100.000% similar) in 412 aa overlap (8-419:83-494) 10 20 30 ef0175 SYLFEPSKGGYGYRRSGRDKYGPPTRTEYRLIVENLS ..:::::::::::::::::::::::::::: gi|114 YELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 60 70 80 90 100 110 40 50 60 70 80 90 ef0175 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 120 130 140 150 160 170 100 110 120 130 140 150 ef0175 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS 180 190 200 210 220 230 160 170 180 190 200 210 ef0175 RSRSQSRSRSKKEKSRSPSKDKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RSRSQSRSRSKKEKSRSPSKDKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS 240 250 260 270 280 290 220 230 240 250 260 270 ef0175 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKAGSRSRSRSRSKSKD :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|114 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKD 300 310 320 330 340 350 280 290 300 310 320 330 ef0175 KRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS 360 370 380 390 400 410 340 350 360 370 380 390 ef0175 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS 420 430 440 450 460 470 400 410 ef0175 KSRSRSASRSPSRSRSRSHSRS :::::::::::::::::::::: gi|114 KSRSRSASRSPSRSRSRSHSRS 480 490 >>gi|20981726|sp|Q08170|SFRS4_HUMAN Splicing factor, arg (494 aa) initn: 2576 init1: 2576 opt: 2576 Z-score: 2062.2 bits: 390.8 E(): 3.2e-106 Smith-Waterman score: 2576; 98.786% identity (100.000% similar) in 412 aa overlap (8-419:83-494) 10 20 30 ef0175 SYLFEPSKGGYGYRRSGRDKYGPPTRTEYRLIVENLS ..:::::::::::::::::::::::::::: gi|209 YELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 60 70 80 90 100 110 40 50 60 70 80 90 ef0175 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 120 130 140 150 160 170 100 110 120 130 140 150 ef0175 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS 180 190 200 210 220 230 160 170 180 190 200 210 ef0175 RSRSQSRSRSKKEKSRSPSKDKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|209 RSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS 240 250 260 270 280 290 220 230 240 250 260 270 ef0175 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKAGSRSRSRSRSKSKD :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|209 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKD 300 310 320 330 340 350 280 290 300 310 320 330 ef0175 KRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 KRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS 360 370 380 390 400 410 340 350 360 370 380 390 ef0175 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS 420 430 440 450 460 470 400 410 ef0175 KSRSRSASRSPSRSRSRSHSRS :::::::::::::::::::::: gi|209 KSRSRSASRSPSRSRSRSHSRS 480 490 >>gi|30585347|gb|AAP36946.1| Homo sapiens splicing facto (495 aa) initn: 2576 init1: 2576 opt: 2576 Z-score: 2062.2 bits: 390.8 E(): 3.2e-106 Smith-Waterman score: 2576; 98.786% identity (100.000% similar) in 412 aa overlap (8-419:83-494) 10 20 30 ef0175 SYLFEPSKGGYGYRRSGRDKYGPPTRTEYRLIVENLS ..:::::::::::::::::::::::::::: gi|305 YELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 60 70 80 90 100 110 40 50 60 70 80 90 ef0175 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 120 130 140 150 160 170 100 110 120 130 140 150 ef0175 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS 180 190 200 210 220 230 160 170 180 190 200 210 ef0175 RSRSQSRSRSKKEKSRSPSKDKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|305 RSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS 240 250 260 270 280 290 220 230 240 250 260 270 ef0175 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKAGSRSRSRSRSKSKD :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|305 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKD 300 310 320 330 340 350 280 290 300 310 320 330 ef0175 KRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 KRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS 360 370 380 390 400 410 340 350 360 370 380 390 ef0175 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS 420 430 440 450 460 470 400 410 ef0175 KSRSRSASRSPSRSRSRSHSRS :::::::::::::::::::::: gi|305 KSRSRSASRSPSRSRSRSHSRSL 480 490 >>gi|109000271|ref|XP_001113479.1| PREDICTED: splicing f (472 aa) initn: 2563 init1: 2563 opt: 2563 Z-score: 2052.1 bits: 388.9 E(): 1.2e-105 Smith-Waterman score: 2563; 98.301% identity (100.000% similar) in 412 aa overlap (8-419:61-472) 10 20 30 ef0175 SYLFEPSKGGYGYRRSGRDKYGPPTRTEYRLIVENLS ..:::::::::::::::::::::::::::: gi|109 YELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 40 50 60 70 80 90 40 50 60 70 80 90 ef0175 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 100 110 120 130 140 150 100 110 120 130 140 150 ef0175 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS 160 170 180 190 200 210 160 170 180 190 200 210 ef0175 RSRSQSRSRSKKEKSRSPSKDKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS :::::::::::::::::::::::::::.::::::::::::::::::::::.::::::::: gi|109 RSRSQSRSRSKKEKSRSPSKDKSRSRSRSAGKSRSKSKDQAEEKIQNNDNAGKPKSRSPS 220 230 240 250 260 270 220 230 240 250 260 270 ef0175 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKAGSRSRSRSRSKSKD :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|109 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKD 280 290 300 310 320 330 280 290 300 310 320 330 ef0175 KRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS :::.::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|109 KRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSMS 340 350 360 370 380 390 340 350 360 370 380 390 ef0175 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS 400 410 420 430 440 450 400 410 ef0175 KSRSRSASRSPSRSRSRSHSRS :::::::::::::::::::::: gi|109 KSRSRSASRSPSRSRSRSHSRS 460 470 >>gi|109000265|ref|XP_001113540.1| PREDICTED: splicing f (494 aa) initn: 2563 init1: 2563 opt: 2563 Z-score: 2051.9 bits: 388.9 E(): 1.2e-105 Smith-Waterman score: 2563; 98.301% identity (100.000% similar) in 412 aa overlap (8-419:83-494) 10 20 30 ef0175 SYLFEPSKGGYGYRRSGRDKYGPPTRTEYRLIVENLS ..:::::::::::::::::::::::::::: gi|109 YELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 60 70 80 90 100 110 40 50 60 70 80 90 ef0175 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 120 130 140 150 160 170 100 110 120 130 140 150 ef0175 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS 180 190 200 210 220 230 160 170 180 190 200 210 ef0175 RSRSQSRSRSKKEKSRSPSKDKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS :::::::::::::::::::::::::::.::::::::::::::::::::::.::::::::: gi|109 RSRSQSRSRSKKEKSRSPSKDKSRSRSRSAGKSRSKSKDQAEEKIQNNDNAGKPKSRSPS 240 250 260 270 280 290 220 230 240 250 260 270 ef0175 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKAGSRSRSRSRSKSKD :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|109 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKD 300 310 320 330 340 350 280 290 300 310 320 330 ef0175 KRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS :::.::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|109 KRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSMS 360 370 380 390 400 410 340 350 360 370 380 390 ef0175 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS 420 430 440 450 460 470 400 410 ef0175 KSRSRSASRSPSRSRSRSHSRS :::::::::::::::::::::: gi|109 KSRSRSASRSPSRSRSRSHSRS 480 490 >>gi|307438|gb|AAA36649.1| pre-mRNA splicing factor (494 aa) initn: 2557 init1: 2557 opt: 2557 Z-score: 2047.1 bits: 388.0 E(): 2.2e-105 Smith-Waterman score: 2557; 98.058% identity (99.272% similar) in 412 aa overlap (8-419:83-494) 10 20 30 ef0175 SYLFEPSKGGYGYRRSGRDKYGPPTRTEYRLIVENLS ..:::::::::::::::::::::::::::: gi|307 YELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLS 60 70 80 90 100 110 40 50 60 70 80 90 ef0175 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|307 SRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 120 130 140 150 160 170 100 110 120 130 140 150 ef0175 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|307 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS 180 190 200 210 220 230 160 170 180 190 200 210 ef0175 RSRSQSRSRSKKEKSRSPSKDKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|307 RSRSQSRSRSKKEKSRSPSKDKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPS 240 250 260 270 280 290 220 230 240 250 260 270 ef0175 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKAGSRSRSRSRSKSKD ::::::::::::::::::::::::: .:. :::::::::::::::::::::::::::::: gi|307 RHKSKSKSRSRSQERRVEEEKRGSVEQGQEQEKSLRQSRSRSRSKAGSRSRSRSRSKSKD 300 310 320 330 340 350 280 290 300 310 320 330 ef0175 KRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|307 KRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS 360 370 380 390 400 410 340 350 360 370 380 390 ef0175 KEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS ::::::::::::::::::::::: :.:::::::::::::::::::::::::::::::::: gi|307 KEREHAKSESSQREGRGESENAGRNEETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRS 420 430 440 450 460 470 400 410 ef0175 KSRSRSASRSPSRSRSRSHSRS :::::::::::::::::::::: gi|307 KSRSRSASRSPSRSRSRSHSRS 480 490 419 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Fri Aug 8 06:51:36 2008 done: Fri Aug 8 06:54:02 2008 Total Scan time: 794.240 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]