hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080808/iprscan-20080808-06540371/chunk_1/iprscan-20080808-06540371.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: ef01757 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00360 63.7 2.3e-14 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00360 1/1 30 98 .. 1 121 [] 63.7 2.3e-14 Alignments of top-scoring domains: SM00360: domain 1 of 1, from 30 to 98: score 63.7, E = 2.3e-14 *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri +l+V NL ++ ++++dL+++ ++ G+v++++ ef01757 30 RLIVENL--SSRCSWQDLKDYM--------------RQAGEVTYADA 60 vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli + ++ + + +eF + +d+++A + ef01757 61 HKGRK--------------------------NEGVIEFVSYSDMKRA--L 82 ealnaskGkeledgGrptlglrVe<-* e+l+ G+e+ +Gr+ +r+ ef01757 83 EKLD---GTEV--NGRK---IRLV 98 //