# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oef03277.fasta.nr -Q ef03277.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ef03277, 1792 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6772761 sequences Expectation_n fit: rho(ln(x))= 7.0376+/-0.000221; mu= 6.7951+/- 0.012 mean_var=206.5935+/-39.410, 0's: 44 Z-trim: 268 B-trim: 0 in 0/66 Lambda= 0.089231 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 41, opt: 29, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089314|dbj|BAD93101.1| Pro-alpha-1 type V col (1792) 13252 1720.8 0 gi|85687376|sp|P20908|CO5A1_HUMAN Collagen alpha-1 (1838) 13252 1720.8 0 gi|190192196|dbj|BAG48312.1| collagen type V alpha (1838) 13244 1719.7 0 gi|189520|gb|AAA59993.1| pro-alpha-1 type V collag (1838) 13230 1717.9 0 gi|119608538|gb|EAW88132.1| collagen, type V, alph (1844) 13220 1716.7 0 gi|219510|dbj|BAA14323.1| collagen alpha 1(V) chai (1838) 13210 1715.4 0 gi|194226001|ref|XP_001917404.1| PREDICTED: simila (1931) 12856 1669.8 0 gi|62086216|dbj|BAD91583.1| procollagen alpha 1(V) (1840) 12827 1666.1 0 gi|7441219|pir||S18803 collagen alpha 1(V) chain - (1843) 12725 1652.9 0 gi|81910407|sp|Q60467|CO5A1_CRILO Collagen alpha-1 (1840) 12707 1650.6 0 gi|149039207|gb|EDL93427.1| procollagen, type V, a (1840) 12696 1649.2 0 gi|81917473|sp|Q9JI03|CO5A1_RAT Collagen alpha-1(V (1840) 12685 1647.8 0 gi|125987810|sp|O88207|CO5A1_MOUSE Collagen alpha- (1838) 12642 1642.2 0 gi|3219172|dbj|BAA28786.1| collagen a1(V) [Mus mus (1838) 12638 1641.7 0 gi|148676427|gb|EDL08374.1| procollagen, type V, a (1838) 12631 1640.8 0 gi|126297989|ref|XP_001372420.1| PREDICTED: simila (1873) 12529 1627.7 0 gi|149410287|ref|XP_001506296.1| PREDICTED: simila (1841) 12375 1607.9 0 gi|6759903|gb|AAF28099.1| alpha 1 (V) collagen [Ga (1835) 11943 1552.3 0 gi|119608535|gb|EAW88129.1| collagen, type V, alph (1405) 10592 1378.2 0 gi|109109841|ref|XP_001118214.1| PREDICTED: simila (1413) 9890 1287.8 0 gi|73967750|ref|XP_537804.2| PREDICTED: similar to (1862) 9800 1276.4 0 gi|71361203|dbj|BAE16360.1| type V/XI procollagen (1860) 9061 1181.3 0 gi|114558034|ref|XP_001139974.1| PREDICTED: alpha (1818) 8974 1170.0 0 gi|118094258|ref|XP_422303.2| PREDICTED: similar t (1805) 8972 1169.8 0 gi|118094262|ref|XP_001231651.1| PREDICTED: simila (1766) 8971 1169.6 0 gi|119593317|gb|EAW72911.1| collagen, type XI, alp (1818) 8968 1169.3 0 gi|194036604|ref|XP_001929407.1| PREDICTED: collag (1806) 8966 1169.0 0 gi|114558036|ref|XP_001139888.1| PREDICTED: alpha (1767) 8965 1168.9 0 gi|118094260|ref|XP_001231624.1| PREDICTED: simila (1817) 8965 1168.9 0 gi|119593315|gb|EAW72909.1| collagen, type XI, alp (1767) 8961 1168.4 0 gi|114558032|ref|XP_001140143.1| PREDICTED: alpha (1806) 8960 1168.2 0 gi|98985810|ref|NP_542196.2| alpha 1 type XI colla (1818) 8958 1168.0 0 gi|119593314|gb|EAW72908.1| collagen, type XI, alp (1806) 8955 1167.6 0 gi|6165883|gb|AAF04726.1| collagen type XI alpha-a (1818) 8955 1167.6 0 gi|98985808|ref|NP_542197.2| alpha 1 type XI colla (1767) 8950 1166.9 0 gi|6165881|gb|AAF04724.1| collagen type XI alpha-1 (1767) 8947 1166.6 0 gi|119889738|ref|XP_587946.3| PREDICTED: similar t (1766) 8944 1166.2 0 gi|119889736|ref|XP_001253241.1| PREDICTED: simila (1805) 8944 1166.2 0 gi|55666164|emb|CAH73908.1| collagen, type XI, alp (1806) 8944 1166.2 0 gi|119889734|ref|XP_001253223.1| PREDICTED: simila (1817) 8942 1165.9 0 gi|194211065|ref|XP_001918150.1| PREDICTED: simila (1817) 8942 1165.9 0 gi|6165882|gb|AAF04725.1| collagen type XI alpha-1 (1806) 8941 1165.8 0 gi|114558038|ref|XP_001140052.1| PREDICTED: alpha (1823) 8937 1165.3 0 gi|114558040|ref|XP_001139807.1| PREDICTED: alpha (1690) 8911 1161.9 0 gi|21542396|sp|P12107.3|COBA1_HUMAN Collagen alpha (1806) 8900 1160.5 0 gi|119889740|ref|XP_001253288.1| PREDICTED: simila (1690) 8893 1159.6 0 gi|109734414|gb|AAI17698.1| COL11A1 protein [Homo (1690) 8892 1159.4 0 gi|62644224|ref|XP_342326.2| PREDICTED: similar to (1816) 8890 1159.2 0 gi|109465415|ref|XP_001076840.1| PREDICTED: simila (1765) 8881 1158.1 0 gi|2493781|sp|Q61245|COBA1_MOUSE Collagen alpha-1( (1804) 8876 1157.4 0 >>gi|62089314|dbj|BAD93101.1| Pro-alpha-1 type V collage (1792 aa) initn: 13252 init1: 13252 opt: 13252 Z-score: 9228.4 bits: 1720.8 E(): 0 Smith-Waterman score: 13252; 100.000% identity (100.000% similar) in 1792 aa overlap (1-1792:1-1792) 10 20 30 40 50 60 ef0327 DFHNLPDGITKTTGFCATRRSSKGPDVAYRVTKDAQLSAPTKQLYPASAFPEDFSILTTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DFHNLPDGITKTTGFCATRRSSKGPDVAYRVTKDAQLSAPTKQLYPASAFPEDFSILTTV 10 20 30 40 50 60 70 80 90 100 110 120 ef0327 KAKKGSQAFLVSIYNEQGIQQIGLELGRSPVFLYEDHTGKPGPEDYPLFRGINLSDGKWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KAKKGSQAFLVSIYNEQGIQQIGLELGRSPVFLYEDHTGKPGPEDYPLFRGINLSDGKWH 70 80 90 100 110 120 130 140 150 160 170 180 ef0327 RIALSVHKKNVTLILDCKKKTTKFLDRSDHPMIDINGIIVFGTRILDEEVFEGDIQQLLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RIALSVHKKNVTLILDCKKKTTKFLDRSDHPMIDINGIIVFGTRILDEEVFEGDIQQLLF 130 140 150 160 170 180 190 200 210 220 230 240 ef0327 VSDHRAAYDYCEHYSPDCDTAVPDTPQSQDPNPDEYYTEGDGEGETYYYEYPYYEDPEDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VSDHRAAYDYCEHYSPDCDTAVPDTPQSQDPNPDEYYTEGDGEGETYYYEYPYYEDPEDL 190 200 210 220 230 240 250 260 270 280 290 300 ef0327 GKEPTPSKKPVEAAKETTEVPEELTPTPTEAAPMPETSEGAGKEEDVGIGDYDYVPSEDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GKEPTPSKKPVEAAKETTEVPEELTPTPTEAAPMPETSEGAGKEEDVGIGDYDYVPSEDY 250 260 270 280 290 300 310 320 330 340 350 360 ef0327 YTPSPYDDLTYGEGEENPDQPTDPGAGAEIPTSTADTSNSSNPAPPPGEGADDLEGEFTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 YTPSPYDDLTYGEGEENPDQPTDPGAGAEIPTSTADTSNSSNPAPPPGEGADDLEGEFTE 310 320 330 340 350 360 370 380 390 400 410 420 ef0327 ETIRNLDENYYDPYYDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ETIRNLDENYYDPYYDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGML 370 380 390 400 410 420 430 440 450 460 470 480 ef0327 IEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 IEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRF 430 440 450 460 470 480 490 500 510 520 530 540 ef0327 GGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPG 490 500 510 520 530 540 550 560 570 580 590 600 ef0327 DVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRG 550 560 570 580 590 600 610 620 630 640 650 660 ef0327 DPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPG 610 620 630 640 650 660 670 680 690 700 710 720 ef0327 PKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPG 670 680 690 700 710 720 730 740 750 760 770 780 ef0327 KEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKG 730 740 750 760 770 780 790 800 810 820 830 840 ef0327 DRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIG 790 800 810 820 830 840 850 860 870 880 890 900 ef0327 FPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPG 850 860 870 880 890 900 910 920 930 940 950 960 ef0327 ERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTG 910 920 930 940 950 960 970 980 990 1000 1010 1020 ef0327 ETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPG 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 ef0327 PVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKG 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 ef0327 PQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQG 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 ef0327 PIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVG 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 ef0327 QMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKG 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 ef0327 ERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKG 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 ef0327 DDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIG 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 ef0327 PQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPG 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 ef0327 LIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKG 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 ef0327 SSGPTGPKGEAGHPGPPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGNGENYVDYAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SSGPTGPKGEAGHPGPPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGNGENYVDYAD 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 ef0327 GMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDS 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 ef0327 FKVYCNFTAGGSTCVFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FKVYCNFTAGGSTCVFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVV 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 ef0327 QMTFLRLLSASAHQNVTYHCYQSVAWQDAATGSYDKALRFLGSNDEEMSYDNNPYIRALV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QMTFLRLLSASAHQNVTYHCYQSVAWQDAATGSYDKALRFLGSNDEEMSYDNNPYIRALV 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 ef0327 DGCATKKGYQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFMG :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DGCATKKGYQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFMG 1750 1760 1770 1780 1790 >>gi|85687376|sp|P20908|CO5A1_HUMAN Collagen alpha-1(V) (1838 aa) initn: 13252 init1: 13252 opt: 13252 Z-score: 9228.3 bits: 1720.8 E(): 0 Smith-Waterman score: 13252; 100.000% identity (100.000% similar) in 1792 aa overlap (1-1792:47-1838) 10 20 30 ef0327 DFHNLPDGITKTTGFCATRRSSKGPDVAYR :::::::::::::::::::::::::::::: gi|856 APLLPPLLLLLLWAPPPSRAAQPADLLKVLDFHNLPDGITKTTGFCATRRSSKGPDVAYR 20 30 40 50 60 70 40 50 60 70 80 90 ef0327 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSP 80 90 100 110 120 130 100 110 120 130 140 150 ef0327 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH 140 150 160 170 180 190 160 170 180 190 200 210 ef0327 PMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 PMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD 200 210 220 230 240 250 220 230 240 250 260 270 ef0327 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE 260 270 280 290 300 310 280 290 300 310 320 330 ef0327 AAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 AAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI 320 330 340 350 360 370 340 350 360 370 380 390 ef0327 PTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 PTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPA 380 390 400 410 420 430 400 410 420 430 440 450 ef0327 NQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 NQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPG 440 450 460 470 480 490 460 470 480 490 500 510 ef0327 ERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 ERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLA 500 510 520 530 540 550 520 530 540 550 560 570 ef0327 LRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 LRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDG 560 570 580 590 600 610 580 590 600 610 620 630 ef0327 ARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 ARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPG 620 630 640 650 660 670 640 650 660 670 680 690 ef0327 EPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 EPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQG 680 690 700 710 720 730 700 710 720 730 740 750 ef0327 AIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 AIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKG 740 750 760 770 780 790 760 770 780 790 800 810 ef0327 ADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 ADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPG 800 810 820 830 840 850 820 830 840 850 860 870 ef0327 PLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 PLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTG 860 870 880 890 900 910 880 890 900 910 920 930 ef0327 PRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 PRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPG 920 930 940 950 960 970 940 950 960 970 980 990 ef0327 HPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 HPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEG 980 990 1000 1010 1020 1030 1000 1010 1020 1030 1040 1050 ef0327 TKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 TKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAG 1040 1050 1060 1070 1080 1090 1060 1070 1080 1090 1100 1110 ef0327 AAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 AAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDG 1100 1110 1120 1130 1140 1150 1120 1130 1140 1150 1160 1170 ef0327 DKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 DKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEG 1160 1170 1180 1190 1200 1210 1180 1190 1200 1210 1220 1230 ef0327 PRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 PRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIG 1220 1230 1240 1250 1260 1270 1240 1250 1260 1270 1280 1290 ef0327 NPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 NPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKG 1280 1290 1300 1310 1320 1330 1300 1310 1320 1330 1340 1350 ef0327 SPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 SPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPG 1340 1350 1360 1370 1380 1390 1360 1370 1380 1390 1400 1410 ef0327 PAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 PAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPG 1400 1410 1420 1430 1440 1450 1420 1430 1440 1450 1460 1470 ef0327 PDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 PDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1460 1470 1480 1490 1500 1510 1480 1490 1500 1510 1520 1530 ef0327 EQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 EQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPL 1520 1530 1540 1550 1560 1570 1540 1550 1560 1570 1580 1590 ef0327 PIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 PIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPA 1580 1590 1600 1610 1620 1630 1600 1610 1620 1630 1640 1650 ef0327 RTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 RTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWP 1640 1650 1660 1670 1680 1690 1660 1670 1680 1690 1700 1710 ef0327 KENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAWQDAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 KENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAWQDAA 1700 1710 1720 1730 1740 1750 1720 1730 1740 1750 1760 1770 ef0327 TGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPIVDIM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|856 TGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPIVDIM 1760 1770 1780 1790 1800 1810 1780 1790 ef0327 FNDFGEASQKFGFEVGPACFMG :::::::::::::::::::::: gi|856 FNDFGEASQKFGFEVGPACFMG 1820 1830 >>gi|190192196|dbj|BAG48312.1| collagen type V alpha 1 [ (1838 aa) initn: 13244 init1: 13244 opt: 13244 Z-score: 9222.7 bits: 1719.7 E(): 0 Smith-Waterman score: 13244; 99.944% identity (100.000% similar) in 1792 aa overlap (1-1792:47-1838) 10 20 30 ef0327 DFHNLPDGITKTTGFCATRRSSKGPDVAYR :::::::::::::::::::::::::::::: gi|190 APLLPPLLLLLLWAPPPSRAAQPADLLKVLDFHNLPDGITKTTGFCATRRSSKGPDVAYR 20 30 40 50 60 70 40 50 60 70 80 90 ef0327 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSP 80 90 100 110 120 130 100 110 120 130 140 150 ef0327 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH 140 150 160 170 180 190 160 170 180 190 200 210 ef0327 PMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 PMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD 200 210 220 230 240 250 220 230 240 250 260 270 ef0327 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE 260 270 280 290 300 310 280 290 300 310 320 330 ef0327 AAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 AAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI 320 330 340 350 360 370 340 350 360 370 380 390 ef0327 PTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 PTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPA 380 390 400 410 420 430 400 410 420 430 440 450 ef0327 NQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 NQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPG 440 450 460 470 480 490 460 470 480 490 500 510 ef0327 ERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLA :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|190 ERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGSDAGSKGPMVSAQESQAQAILQQARLA 500 510 520 530 540 550 520 530 540 550 560 570 ef0327 LRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 LRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDG 560 570 580 590 600 610 580 590 600 610 620 630 ef0327 ARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 ARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPG 620 630 640 650 660 670 640 650 660 670 680 690 ef0327 EPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 EPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQG 680 690 700 710 720 730 700 710 720 730 740 750 ef0327 AIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 AIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKG 740 750 760 770 780 790 760 770 780 790 800 810 ef0327 ADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 ADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPG 800 810 820 830 840 850 820 830 840 850 860 870 ef0327 PLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 PLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTG 860 870 880 890 900 910 880 890 900 910 920 930 ef0327 PRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 PRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPG 920 930 940 950 960 970 940 950 960 970 980 990 ef0327 HPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 HPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEG 980 990 1000 1010 1020 1030 1000 1010 1020 1030 1040 1050 ef0327 TKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 TKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAG 1040 1050 1060 1070 1080 1090 1060 1070 1080 1090 1100 1110 ef0327 AAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 AAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDG 1100 1110 1120 1130 1140 1150 1120 1130 1140 1150 1160 1170 ef0327 DKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 DKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEG 1160 1170 1180 1190 1200 1210 1180 1190 1200 1210 1220 1230 ef0327 PRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 PRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIG 1220 1230 1240 1250 1260 1270 1240 1250 1260 1270 1280 1290 ef0327 NPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 NPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKG 1280 1290 1300 1310 1320 1330 1300 1310 1320 1330 1340 1350 ef0327 SPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 SPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPG 1340 1350 1360 1370 1380 1390 1360 1370 1380 1390 1400 1410 ef0327 PAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 PAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPG 1400 1410 1420 1430 1440 1450 1420 1430 1440 1450 1460 1470 ef0327 PDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 PDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1460 1470 1480 1490 1500 1510 1480 1490 1500 1510 1520 1530 ef0327 EQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 EQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPL 1520 1530 1540 1550 1560 1570 1540 1550 1560 1570 1580 1590 ef0327 PIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 PIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPA 1580 1590 1600 1610 1620 1630 1600 1610 1620 1630 1640 1650 ef0327 RTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 RTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWP 1640 1650 1660 1670 1680 1690 1660 1670 1680 1690 1700 1710 ef0327 KENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAWQDAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 KENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAWQDAA 1700 1710 1720 1730 1740 1750 1720 1730 1740 1750 1760 1770 ef0327 TGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPIVDIM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 TGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPIVDIM 1760 1770 1780 1790 1800 1810 1780 1790 ef0327 FNDFGEASQKFGFEVGPACFMG :::::::::::::::::::::: gi|190 FNDFGEASQKFGFEVGPACFMG 1820 1830 >>gi|189520|gb|AAA59993.1| pro-alpha-1 type V collagen (1838 aa) initn: 13230 init1: 13230 opt: 13230 Z-score: 9213.0 bits: 1717.9 E(): 0 Smith-Waterman score: 13230; 99.777% identity (99.944% similar) in 1792 aa overlap (1-1792:47-1838) 10 20 30 ef0327 DFHNLPDGITKTTGFCATRRSSKGPDVAYR :::::::::::::::::::::::::::::: gi|189 APLLPPLLLLLLWAPPPSRAAQPADLLKVLDFHNLPDGITKTTGFCATRRSSKGPDVAYR 20 30 40 50 60 70 40 50 60 70 80 90 ef0327 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSP :::::..::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 VTKDAHVSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSP 80 90 100 110 120 130 100 110 120 130 140 150 ef0327 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH 140 150 160 170 180 190 160 170 180 190 200 210 ef0327 PMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 PMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD 200 210 220 230 240 250 220 230 240 250 260 270 ef0327 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE 260 270 280 290 300 310 280 290 300 310 320 330 ef0327 AAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 AAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI 320 330 340 350 360 370 340 350 360 370 380 390 ef0327 PTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPA ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|189 PTSTADTSNSSNPRPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPA 380 390 400 410 420 430 400 410 420 430 440 450 ef0327 NQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 NQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPG 440 450 460 470 480 490 460 470 480 490 500 510 ef0327 ERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 ERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLA 500 510 520 530 540 550 520 530 540 550 560 570 ef0327 LRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 LRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDG 560 570 580 590 600 610 580 590 600 610 620 630 ef0327 ARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 ARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPG 620 630 640 650 660 670 640 650 660 670 680 690 ef0327 EPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 EPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQG 680 690 700 710 720 730 700 710 720 730 740 750 ef0327 AIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 AIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKG 740 750 760 770 780 790 760 770 780 790 800 810 ef0327 ADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 ADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPG 800 810 820 830 840 850 820 830 840 850 860 870 ef0327 PLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 PLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTG 860 870 880 890 900 910 880 890 900 910 920 930 ef0327 PRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 PRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPG 920 930 940 950 960 970 940 950 960 970 980 990 ef0327 HPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 HPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEG 980 990 1000 1010 1020 1030 1000 1010 1020 1030 1040 1050 ef0327 TKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 TKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAG 1040 1050 1060 1070 1080 1090 1060 1070 1080 1090 1100 1110 ef0327 AAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 AAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDG 1100 1110 1120 1130 1140 1150 1120 1130 1140 1150 1160 1170 ef0327 DKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 DKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEG 1160 1170 1180 1190 1200 1210 1180 1190 1200 1210 1220 1230 ef0327 PRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 PRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIG 1220 1230 1240 1250 1260 1270 1240 1250 1260 1270 1280 1290 ef0327 NPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 NPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKG 1280 1290 1300 1310 1320 1330 1300 1310 1320 1330 1340 1350 ef0327 SPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 SPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPG 1340 1350 1360 1370 1380 1390 1360 1370 1380 1390 1400 1410 ef0327 PAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 PAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPG 1400 1410 1420 1430 1440 1450 1420 1430 1440 1450 1460 1470 ef0327 PDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 PDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1460 1470 1480 1490 1500 1510 1480 1490 1500 1510 1520 1530 ef0327 EQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 EQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPL 1520 1530 1540 1550 1560 1570 1540 1550 1560 1570 1580 1590 ef0327 PIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 PIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPA 1580 1590 1600 1610 1620 1630 1600 1610 1620 1630 1640 1650 ef0327 RTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 RTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWP 1640 1650 1660 1670 1680 1690 1660 1670 1680 1690 1700 1710 ef0327 KENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAWQDAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 KENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAWQDAA 1700 1710 1720 1730 1740 1750 1720 1730 1740 1750 1760 1770 ef0327 TGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPIVDIM ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|189 TGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPIADIM 1760 1770 1780 1790 1800 1810 1780 1790 ef0327 FNDFGEASQKFGFEVGPACFMG :::::::::::::::::::::: gi|189 FNDFGEASQKFGFEVGPACFMG 1820 1830 >>gi|119608538|gb|EAW88132.1| collagen, type V, alpha 1, (1844 aa) initn: 10905 init1: 10905 opt: 13220 Z-score: 9206.0 bits: 1716.7 E(): 0 Smith-Waterman score: 13220; 99.666% identity (99.666% similar) in 1798 aa overlap (1-1792:47-1844) 10 20 30 ef0327 DFHNLPDGITKTTGFCATRRSSKGPDVAYR :::::::::::::::::::::::::::::: gi|119 APLLPPLLLLLLWAPPPSRAAQPADLLKVLDFHNLPDGITKTTGFCATRRSSKGPDVAYR 20 30 40 50 60 70 40 50 60 70 80 90 ef0327 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSP 80 90 100 110 120 130 100 110 120 130 140 150 ef0327 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH 140 150 160 170 180 190 160 170 180 190 200 210 ef0327 PMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD 200 210 220 230 240 250 220 230 240 250 260 270 ef0327 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE 260 270 280 290 300 310 280 290 300 310 320 330 ef0327 AAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI 320 330 340 350 360 370 340 350 360 370 380 ef0327 PTSTADTSNSSN-----P-APPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEI :::::::::::: : ::::::::::::::::::::::::::::::::::::::::: gi|119 PTSTADTSNSSNVISFLPIAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEI 380 390 400 410 420 430 390 400 410 420 430 440 ef0327 GPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTG 440 450 460 470 480 490 450 460 470 480 490 500 ef0327 QVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAIL 500 510 520 530 540 550 510 520 530 540 550 560 ef0327 QQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRG 560 570 580 590 600 610 570 580 590 600 610 620 ef0327 RAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVG 620 630 640 650 660 670 630 640 650 660 670 680 ef0327 PRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQG 680 690 700 710 720 730 690 700 710 720 730 740 ef0327 LPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPG 740 750 760 770 780 790 750 760 770 780 790 800 ef0327 PRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGG 800 810 820 830 840 850 810 820 830 840 850 860 ef0327 PNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRG 860 870 880 890 900 910 870 880 890 900 910 920 ef0327 QRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPG 920 930 940 950 960 970 930 940 950 960 970 980 ef0327 KDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPG 980 990 1000 1010 1020 1030 990 1000 1010 1020 1030 1040 ef0327 LAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPG 1040 1050 1060 1070 1080 1090 1050 1060 1070 1080 1090 1100 ef0327 ERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVG 1100 1110 1120 1130 1140 1150 1110 1120 1130 1140 1150 1160 ef0327 PPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFG 1160 1170 1180 1190 1200 1210 1170 1180 1190 1200 1210 1220 ef0327 QKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQG 1220 1230 1240 1250 1260 1270 1230 1240 1250 1260 1270 1280 ef0327 PPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPG 1280 1290 1300 1310 1320 1330 1290 1300 1310 1320 1330 1340 ef0327 DDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPG 1340 1350 1360 1370 1380 1390 1350 1360 1370 1380 1390 1400 ef0327 KRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQG 1400 1410 1420 1430 1440 1450 1410 1420 1430 1440 1450 1460 ef0327 LPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQG 1460 1470 1480 1490 1500 1510 1470 1480 1490 1500 1510 1520 ef0327 SSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPG 1520 1530 1540 1550 1560 1570 1530 1540 1550 1560 1570 1580 ef0327 EVIQPLPIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EVIQPLPIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLG 1580 1590 1600 1610 1620 1630 1590 1600 1610 1620 1630 1640 ef0327 TQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGA 1640 1650 1660 1670 1680 1690 1650 1660 1670 1680 1690 1700 ef0327 RITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSV 1700 1710 1720 1730 1740 1750 1710 1720 1730 1740 1750 1760 ef0327 AWQDAATGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AWQDAATGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQV 1760 1770 1780 1790 1800 1810 1770 1780 1790 ef0327 PIVDIMFNDFGEASQKFGFEVGPACFMG :::::::::::::::::::::::::::: gi|119 PIVDIMFNDFGEASQKFGFEVGPACFMG 1820 1830 1840 >>gi|219510|dbj|BAA14323.1| collagen alpha 1(V) chain pr (1838 aa) initn: 13210 init1: 13210 opt: 13210 Z-score: 9199.1 bits: 1715.4 E(): 0 Smith-Waterman score: 13210; 99.665% identity (99.888% similar) in 1792 aa overlap (1-1792:47-1838) 10 20 30 ef0327 DFHNLPDGITKTTGFCATRRSSKGPDVAYR :::::::::::::::::::::::::::::: gi|219 APLLPPLLLLLLWAPPPSRAAQPADLLKVLDFHNLPDGITKTTGFCATRRSSKGPDVAYR 20 30 40 50 60 70 40 50 60 70 80 90 ef0327 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSP 80 90 100 110 120 130 100 110 120 130 140 150 ef0327 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH 140 150 160 170 180 190 160 170 180 190 200 210 ef0327 PMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 PMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD 200 210 220 230 240 250 220 230 240 250 260 270 ef0327 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE 260 270 280 290 300 310 280 290 300 310 320 330 ef0327 AAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 AAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI 320 330 340 350 360 370 340 350 360 370 380 390 ef0327 PTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 PTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPA 380 390 400 410 420 430 400 410 420 430 440 450 ef0327 NQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 NQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPG 440 450 460 470 480 490 460 470 480 490 500 510 ef0327 ERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 ERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLA 500 510 520 530 540 550 520 530 540 550 560 570 ef0327 LRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 LRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDG 560 570 580 590 600 610 580 590 600 610 620 630 ef0327 ARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 ARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPG 620 630 640 650 660 670 640 650 660 670 680 690 ef0327 EPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQG .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 KPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQG 680 690 700 710 720 730 700 710 720 730 740 750 ef0327 AIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 AIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKG 740 750 760 770 780 790 760 770 780 790 800 810 ef0327 ADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 ADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPG 800 810 820 830 840 850 820 830 840 850 860 870 ef0327 PLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 PLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTG 860 870 880 890 900 910 880 890 900 910 920 930 ef0327 PRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 PRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPG 920 930 940 950 960 970 940 950 960 970 980 990 ef0327 HPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 HPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEG 980 990 1000 1010 1020 1030 1000 1010 1020 1030 1040 1050 ef0327 TKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 TKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAG 1040 1050 1060 1070 1080 1090 1060 1070 1080 1090 1100 1110 ef0327 AAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 AAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDG 1100 1110 1120 1130 1140 1150 1120 1130 1140 1150 1160 1170 ef0327 DKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 DKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEG 1160 1170 1180 1190 1200 1210 1180 1190 1200 1210 1220 1230 ef0327 PRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 PRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIG 1220 1230 1240 1250 1260 1270 1240 1250 1260 1270 1280 1290 ef0327 NPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKG :::::::::::::::::: :..::::::::::::::::::::::::::::::::::::: gi|219 NPGAVGEKGEPGEAGEPGPSGRSGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKG 1280 1290 1300 1310 1320 1330 1300 1310 1320 1330 1340 1350 ef0327 SPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 SPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPG 1340 1350 1360 1370 1380 1390 1360 1370 1380 1390 1400 1410 ef0327 PAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 PAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPG 1400 1410 1420 1430 1440 1450 1420 1430 1440 1450 1460 1470 ef0327 PDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 PDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1460 1470 1480 1490 1500 1510 1480 1490 1500 1510 1520 1530 ef0327 EQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPL :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|219 EQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPRGEAGHPGPPGPPGPPGEVIQPL 1520 1530 1540 1550 1560 1570 1540 1550 1560 1570 1580 1590 ef0327 PIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 PIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPA 1580 1590 1600 1610 1620 1630 1600 1610 1620 1630 1640 1650 ef0327 RTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 RTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWP 1640 1650 1660 1670 1680 1690 1660 1670 1680 1690 1700 1710 ef0327 KENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAWQDAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 KENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAWQDAA 1700 1710 1720 1730 1740 1750 1720 1730 1740 1750 1760 1770 ef0327 TGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPIVDIM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 TGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPIVDIM 1760 1770 1780 1790 1800 1810 1780 1790 ef0327 FNDFGEASQKFGFEVGPACFMG :::::::::::::::::::::: gi|219 FNDFGEASQKFGFEVGPACFMG 1820 1830 >>gi|194226001|ref|XP_001917404.1| PREDICTED: similar to (1931 aa) initn: 12655 init1: 6048 opt: 12856 Z-score: 8952.6 bits: 1669.8 E(): 0 Smith-Waterman score: 12856; 96.437% identity (98.552% similar) in 1796 aa overlap (1-1792:137-1931) 10 20 30 ef0327 DFHNLPDGITKTTGFCATRRSSKGPDVAYR :::::::::::::::::::::::::::::: gi|194 KPLPCCPAMVAWVLAHSCWATQPADLLKVLDFHNLPDGITKTTGFCATRRSSKGPDVAYR 110 120 130 140 150 160 40 50 60 70 80 90 ef0327 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|194 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLEMGRSP 170 180 190 200 210 220 100 110 120 130 140 150 ef0327 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH 230 240 250 260 270 280 160 170 180 190 200 210 ef0327 PMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PMIDVNGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD 290 300 310 320 330 340 220 230 240 250 260 270 ef0327 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE ::::::: ::..:::::::::::::: ::..::: :.: :::::.::::. :::: ::: gi|194 PNPDEYYPEGENEGETYYYEYPYYEDTEDVSKEPPPTKTPVEAARETTEIAEELTLPPTE 350 360 370 380 390 400 280 290 300 310 320 ef0327 AAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEG----EENPDQPTDPGA :::. ..::: :::.:::: ::::::::::::: ::.::.:::: .::::: .: : gi|194 AAPVTDASEGPGKEDDVGIEDYDYVPSEDYYTPPPYEDLNYGEGLENPDENPDQLPEPRA 410 420 430 440 450 460 330 340 350 360 370 380 ef0327 GAEIPTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGP ::.::::..:::.::::::: :: ::::::::::::.:::::::::::::: ::::::: gi|194 RAEVPTSTVSTSNGSNPAPPPEEGRDDLEGEFTEETIKNLDENYYDPYYDPTVSPSEIGP 470 480 490 500 510 520 390 400 410 420 430 440 ef0327 GMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQV ::::::::::::::::::::::::::::::::::.:::::::::::::::::: :::::: gi|194 GMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLLEGPPGPEGPAGLPGPPGTTGPTGQV 530 540 550 560 570 580 450 460 470 480 490 500 ef0327 GDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQ 590 600 610 620 630 640 510 520 530 540 550 560 ef0327 ARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRA ::::::::::::::::::::.::::::::::::::.:::::::::::::::::::::::: gi|194 ARLALRGPAGPMGLTGRPGPMGPPGSGGLKGEPGDMGPQGPRGVQGPPGPAGKPGRRGRA 650 660 670 680 690 700 570 580 590 600 610 620 ef0327 GSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPR 710 720 730 740 750 760 630 640 650 660 670 680 ef0327 GLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLP :::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::: gi|194 GLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGLKGNVGPQGEPGPPGQQGNPGAQGLP 770 780 790 800 810 820 690 700 710 720 730 740 ef0327 GPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPR 830 840 850 860 870 880 750 760 770 780 790 800 ef0327 GVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPN 890 900 910 920 930 940 810 820 830 840 850 860 ef0327 GDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQR 950 960 970 980 990 1000 870 880 890 900 910 920 ef0327 GPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKD 1010 1020 1030 1040 1050 1060 930 940 950 960 970 980 ef0327 GLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLA ::::::::::::::::::::::::::::::::::::: .::::::::: :::::::::.: gi|194 GLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGSIGERGHPGPP-PPGEQGLPGVA 1070 1080 1090 1100 1110 1120 990 1000 1010 1020 1030 1040 ef0327 GKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGER 1130 1140 1150 1160 1170 1180 1050 1060 1070 1080 1090 1100 ef0327 GPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPP 1190 1200 1210 1220 1230 1240 1110 1120 1130 1140 1150 1160 ef0327 GEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQK 1250 1260 1270 1280 1290 1300 1170 1180 1190 1200 1210 1220 ef0327 GDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPP 1310 1320 1330 1340 1350 1360 1230 1240 1250 1260 1270 1280 ef0327 GGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDD 1370 1380 1390 1400 1410 1420 1290 1300 1310 1320 1330 1340 ef0327 GPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKR 1430 1440 1450 1460 1470 1480 1350 1360 1370 1380 1390 1400 ef0327 GPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLP 1490 1500 1510 1520 1530 1540 1410 1420 1430 1440 1450 1460 ef0327 GSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSS 1550 1560 1570 1580 1590 1600 1470 1480 1490 1500 1510 1520 ef0327 GPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEV 1610 1620 1630 1640 1650 1660 1530 1540 1550 1560 1570 1580 ef0327 IQPLPIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQ :::::::::::::::::::.::::.::::.:::::::::::::::::::::::::::::: gi|194 IQPLPIQASRTRRNIDASQMLDDGDGENYMDYADGMEEIFGSLNSLKLEIEQMKRPLGTQ 1670 1680 1690 1700 1710 1720 1590 1600 1610 1620 1630 1640 ef0327 QNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARI :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|194 QNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGATCVFPDKKSEGARI 1730 1740 1750 1760 1770 1780 1650 1660 1670 1680 1690 1700 ef0327 TSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAW :::::::::::::::::::::::::::::::::::::::::::::::::.::.::::::: gi|194 TSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSVAW 1790 1800 1810 1820 1830 1840 1710 1720 1730 1740 1750 1760 ef0327 QDAATGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPI :::::::::::.:::::::::::.::.::::::::::::.:::::::::::::::::::: gi|194 QDAATGSYDKAMRFLGSNDEEMSFDNSPYIRALVDGCATRKGYQKTVLEIDTPKVEQVPI 1850 1860 1870 1880 1890 1900 1770 1780 1790 ef0327 VDIMFNDFGEASQKFGFEVGPACFMG ::::::::::::::::::::::::.: gi|194 VDIMFNDFGEASQKFGFEVGPACFLG 1910 1920 1930 >>gi|62086216|dbj|BAD91583.1| procollagen alpha 1(V) [Su (1840 aa) initn: 14245 init1: 11115 opt: 12827 Z-score: 8932.6 bits: 1666.1 E(): 0 Smith-Waterman score: 12827; 95.926% identity (98.717% similar) in 1792 aa overlap (1-1792:50-1840) 10 20 30 ef0327 DFHNLPDGITKTTGFCATRRSSKGPDVAYR :::::::::::::::::.:::::::::::: gi|620 LSPPLLLLLLLLWAPPPSRAAQPADLLKVLDFHNLPDGITKTTGFCAARRSSKGPDVAYR 20 30 40 50 60 70 40 50 60 70 80 90 ef0327 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|620 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLEMGRSP 80 90 100 110 120 130 100 110 120 130 140 150 ef0327 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|620 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRVALSVHKKNVTLILDCKKKTTKFLDRSDH 140 150 160 170 180 190 160 170 180 190 200 210 ef0327 PMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD :.::.::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|620 PIIDVNGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDKPQSQD 200 210 220 230 240 250 220 230 240 250 260 270 ef0327 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE ::::::: .:.:.:.::::::::::: .:.::::.:.: :::::.::::: :: : :: gi|620 PNPDEYYPDGEGDGDTYYYEYPYYEDTDDVGKEPSPTKTPVEAARETTEVAEEQTQPPT- 260 270 280 290 300 310 280 290 300 310 320 330 ef0327 AAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI .::.:.:::.:::::: :.:::::::::::::: ::.::.::.: :.::. : :: ::. gi|620 SAPVPDTSEAAGKEEDPGLGDYDYVPSEDYYTPPPYEDLNYGDGLEGPDENPDQGARAEV 320 330 340 350 360 370 340 350 360 370 380 390 ef0327 PTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPA ::::. :::.::::::: :: :::. :::::::.: ::.::::::::: .:::::::::: gi|620 PTSTVLTSNASNPAPPPEEGLDDLDTEFTEETIKNPDESYYDPYYDPTIAPSEIGPGMPA 380 390 400 410 420 430 400 410 420 430 440 450 ef0327 NQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPG ::::::::.:::::::::::::::::::::.::::::::::::::::::::::::::::: gi|620 NQDTIYEGMGGPRGEKGQKGEPAIIEPGMLLEGPPGPEGPAGLPGPPGTMGPTGQVGDPG 440 450 460 470 480 490 460 470 480 490 500 510 ef0327 ERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLA 500 510 520 530 540 550 520 530 540 550 560 570 ef0327 LRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDG ::::::::::::::::.::::::::::::::.:::::::::::::::::::::::::::: gi|620 LRGPAGPMGLTGRPGPMGPPGSGGLKGEPGDMGPQGPRGVQGPPGPAGKPGRRGRAGSDG 560 570 580 590 600 610 580 590 600 610 620 630 ef0327 ARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPG 620 630 640 650 660 670 640 650 660 670 680 690 ef0327 EPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQG :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|620 EPGPRGLLGPKGPPGPPGPPGVTGTDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQG 680 690 700 710 720 730 700 710 720 730 740 750 ef0327 AIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKG 740 750 760 770 780 790 760 770 780 790 800 810 ef0327 ADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPG 800 810 820 830 840 850 820 830 840 850 860 870 ef0327 PLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTG 860 870 880 890 900 910 880 890 900 910 920 930 ef0327 PRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPG 920 930 940 950 960 970 940 950 960 970 980 990 ef0327 HPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 HPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEG 980 990 1000 1010 1020 1030 1000 1010 1020 1030 1040 1050 ef0327 TKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAG :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|620 TKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGSEGPPGPPGPAGSPGERGPAG 1040 1050 1060 1070 1080 1090 1060 1070 1080 1090 1100 1110 ef0327 AAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDG 1100 1110 1120 1130 1140 1150 1120 1130 1140 1150 1160 1170 ef0327 DKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEG 1160 1170 1180 1190 1200 1210 1180 1190 1200 1210 1220 1230 ef0327 PRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIG 1220 1230 1240 1250 1260 1270 1240 1250 1260 1270 1280 1290 ef0327 NPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 NPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKG 1280 1290 1300 1310 1320 1330 1300 1310 1320 1330 1340 1350 ef0327 SPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPG 1340 1350 1360 1370 1380 1390 1360 1370 1380 1390 1400 1410 ef0327 PAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|620 PAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGAPG 1400 1410 1420 1430 1440 1450 1420 1430 1440 1450 1460 1470 ef0327 PDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKG 1460 1470 1480 1490 1500 1510 1480 1490 1500 1510 1520 1530 ef0327 EQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPL 1520 1530 1540 1550 1560 1570 1540 1550 1560 1570 1580 1590 ef0327 PIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPA ::::::::::::::::.:.:..:::.:::::::::::::::::::::::::::::::::: gi|620 PIQASRTRRNIDASQLMDEGEAENYMDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPA 1580 1590 1600 1610 1620 1630 1600 1610 1620 1630 1640 1650 ef0327 RTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWP 1640 1650 1660 1670 1680 1690 1660 1670 1680 1690 1700 1710 ef0327 KENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAWQDAA :::::::::::::::::::::::::::::::::::::::::::::.::.::::::::::: gi|620 KENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSVAWQDAA 1700 1710 1720 1730 1740 1750 1720 1730 1740 1750 1760 1770 ef0327 TGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPIVDIM ::.::::.::::::::::::::.::::::::::::.:::::::::::::::::::::::: gi|620 TGGYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATRKGYQKTVLEIDTPKVEQVPIVDIM 1760 1770 1780 1790 1800 1810 1780 1790 ef0327 FNDFGEASQKFGFEVGPACFMG :::::.::::::::::::::.: gi|620 FNDFGDASQKFGFEVGPACFLG 1820 1830 1840 >>gi|7441219|pir||S18803 collagen alpha 1(V) chain - ham (1843 aa) initn: 18900 init1: 10516 opt: 12725 Z-score: 8861.6 bits: 1652.9 E(): 0 Smith-Waterman score: 12725; 95.045% identity (97.884% similar) in 1796 aa overlap (1-1792:48-1843) 10 20 30 ef0327 DFHNLPDGITKTTGFCATRRSSKGPDVAYR ::::::.:.:::::::::::::.::::::: gi|744 PLLSPLLLLLLLWAPPQSRAAQPTDLLEMLDFHNLPSGVTKTTGFCATRRSSRGPDVAYR 20 30 40 50 60 70 40 50 60 70 80 90 ef0327 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSP :.:::::: : ::::: : : :::::::::::::::::::::.::::::::.:.:::::: gi|744 VSKDAQLSMPRKQLYPDSDFAEDFSILTTVKAKKGSQAFLVSVYNEQGIQQVGMELGRSP 80 90 100 110 120 130 100 110 120 130 140 150 ef0327 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH ::::::::::::::.:::: :::::::::::::.::.:::::::::::::..:::.:::: gi|744 VFLYEDHTGKPGPEEYPLFPGINLSDGKWHRIAISVYKKNVTLILDCKKKVVKFLNRSDH 140 150 160 170 180 190 160 170 180 190 200 210 ef0327 PMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD :.:: ::::.::.::::.:.:::::::::::::::::::::::::::::::::::::::: gi|744 PIIDNNGIIMFGSRILDDEIFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD 200 210 220 230 240 250 220 230 240 250 260 270 ef0327 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE ::::::: ::::::::::::::::::::::::::.:..::::::.:::::::: : : : gi|744 PNPDEYYPEGDGEGETYYYEYPYYEDPEDLGKEPAPTQKPVEAARETTEVPEEQTQPPPE 260 270 280 290 300 310 280 290 300 310 320 330 ef0327 AAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI : .::::. ::::.: :.:::::::..:::::.::.:: :::: :::::::.: .:::. gi|744 APTVPETSDPAGKEDDPGFGDYDYVPTDDYYTPAPYEDLGYGEGVENPDQPTNPDSGAEV 320 330 340 350 360 370 340 350 360 370 380 ef0327 PTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTS----SPSEIGP :::: :::.::::: ::: ::: ::::::::.::.:::::::.:: : ::::::: gi|744 PTSTIITSNTSNPAPSPGEDKDDLGGEFTEETIKNLEENYYDPYFDPDSDSNVSPSEIGP 380 390 400 410 420 430 390 400 410 420 430 440 ef0327 GMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQV ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|744 GMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTTGPTGQV 440 450 460 470 480 490 450 460 470 480 490 500 ef0327 GDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQ ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|744 GDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPNVSAQESQAQAILQQ 500 510 520 530 540 550 510 520 530 540 550 560 ef0327 ARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRA ::::::::::::::::::::.::::::::::::::.::::::::::::::.::::::::: gi|744 ARLALRGPAGPMGLTGRPGPMGPPGSGGLKGEPGDMGPQGPRGVQGPPGPTGKPGRRGRA 560 570 580 590 600 610 570 580 590 600 610 620 ef0327 GSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPR ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|744 GSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGLPGDDGERGDDGEVGPR 620 630 640 650 660 670 630 640 650 660 670 680 ef0327 GLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|744 GLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLP 680 690 700 710 720 730 690 700 710 720 730 740 ef0327 GPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|744 GPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPR 740 750 760 770 780 790 750 760 770 780 790 800 ef0327 GVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|744 GVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPN 800 810 820 830 840 850 810 820 830 840 850 860 ef0327 GDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQR :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|744 GDPGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQR 860 870 880 890 900 910 870 880 890 900 910 920 ef0327 GPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|744 GPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKD 920 930 940 950 960 970 930 940 950 960 970 980 ef0327 GLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|744 GLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGVA 980 990 1000 1010 1020 1030 990 1000 1010 1020 1030 1040 ef0327 GKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGER :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|744 GKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGSEGPPGPPGPAGSPGER 1040 1050 1060 1070 1080 1090 1050 1060 1070 1080 1090 1100 ef0327 GPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPP ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|744 GPAGAAGPIGIPGRPGPQGPPGPAGEKGVPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPP 1100 1110 1120 1130 1140 1150 1110 1120 1130 1140 1150 1160 ef0327 GEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|744 GEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQK 1160 1170 1180 1190 1200 1210 1170 1180 1190 1200 1210 1220 ef0327 GDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPP :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|744 GDEGSRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPP 1220 1230 1240 1250 1260 1270 1230 1240 1250 1260 1270 1280 ef0327 GGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDD ::::::::::::::::::::::::::::: :::::::::::.:::::::::::::::::: gi|744 GGIGNPGAVGEKGEPGEAGEPGLPGEGGPLGPKGERGEKGEAGPSGAAGPPGPKGPPGDD 1280 1290 1300 1310 1320 1330 1290 1300 1310 1320 1330 1340 ef0327 GPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|744 GPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKR 1340 1350 1360 1370 1380 1390 1350 1360 1370 1380 1390 1400 ef0327 GPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|744 GPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLP 1400 1410 1420 1430 1440 1450 1410 1420 1430 1440 1450 1460 ef0327 GSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|744 GSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSS 1460 1470 1480 1490 1500 1510 1470 1480 1490 1500 1510 1520 ef0327 GPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEV ::::::::::::::.:::::::::::::::::::::::::::::::::: :::::::::: gi|744 GPKGEQGITGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGLPGPPGPPGEV 1520 1530 1540 1550 1560 1570 1530 1540 1550 1560 1570 1580 ef0327 IQPLPIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQ :::::::::::::::::::::::: ::.:.:::::::::::::::::::::::::::::: gi|744 IQPLPIQASRTRRNIDASQLLDDGAGESYLDYADGMEEIFGSLNSLKLEIEQMKRPLGTQ 1580 1590 1600 1610 1620 1630 1590 1600 1610 1620 1630 1640 ef0327 QNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|744 QNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARI 1640 1650 1660 1670 1680 1690 1650 1660 1670 1680 1690 1700 ef0327 TSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAW :::::::::::::::::::::::::::::::::::::::::::::::::.::.::::::: gi|744 TSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSVAW 1700 1710 1720 1730 1740 1750 1710 1720 1730 1740 1750 1760 ef0327 QDAATGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPI :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|744 QDAATGSYDKAIRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPI 1760 1770 1780 1790 1800 1810 1770 1780 1790 ef0327 VDIMFNDFGEASQKFGFEVGPACFMG ::::::::::::::::::::::::.: gi|744 VDIMFNDFGEASQKFGFEVGPACFLG 1820 1830 1840 >>gi|81910407|sp|Q60467|CO5A1_CRILO Collagen alpha-1(V) (1840 aa) initn: 13631 init1: 10522 opt: 12707 Z-score: 8849.1 bits: 1650.6 E(): 0 Smith-Waterman score: 12707; 94.933% identity (97.829% similar) in 1796 aa overlap (1-1792:47-1840) 10 20 30 ef0327 DFHNLPDGITKTTGFCATRRSSKGPDVAYR ::::::.:.:::::::::::::.::::::: gi|819 AVPPLLLLLLLLWAPPQSRAAQPTDLLEMLDFHNLPSGVTKTTGFCATRRSSRGPDVAYR 20 30 40 50 60 70 40 50 60 70 80 90 ef0327 VTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSP :.:::::: : ::::: : : :::::::::::::::::::::.::::::::.:.:::::: gi|819 VSKDAQLSMPRKQLYPDSDFAEDFSILTTVKAKKGSQAFLVSVYNEQGIQQVGMELGRSP 80 90 100 110 120 130 100 110 120 130 140 150 ef0327 VFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDH ::::::::::::::.:::: :::::::::::::.::..::::::::::::..:::.:::: gi|819 VFLYEDHTGKPGPEEYPLFPGINLSDGKWHRIAISVYRKNVTLILDCKKKVVKFLNRSDH 140 150 160 170 180 190 160 170 180 190 200 210 ef0327 PMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD :.::.::::.::.::::.:.:::::::::::::::::::::::::::::::::::::::: gi|819 PIIDVNGIIMFGSRILDDEIFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQD 200 210 220 230 240 250 220 230 240 250 260 270 ef0327 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE ::::::: :::: ::::::::::::::::::::.:..::::::.:::::::: : : : gi|819 PNPDEYYPEGDG--ETYYYEYPYYEDPEDLGKEPAPTQKPVEAARETTEVPEEQTQPPPE 260 270 280 290 300 310 280 290 300 310 320 330 ef0327 AAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEI : .::::. ::::.: :.:::::::..:::::.::.:: :::: :::::::.: .:::. gi|819 APTVPETSDPAGKEDDPGFGDYDYVPTDDYYTPAPYEDLGYGEGVENPDQPTNPDSGAEV 320 330 340 350 360 370 340 350 360 370 380 ef0327 PTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTS----SPSEIGP :::: :::.::::: ::: ::: ::::::::.::.:::::::.:: : ::::::: gi|819 PTSTIITSNTSNPAPSPGEDKDDLGGEFTEETIKNLEENYYDPYFDPDSDSNVSPSEIGP 380 390 400 410 420 430 390 400 410 420 430 440 ef0327 GMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQV ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|819 GMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTTGPTGQV 440 450 460 470 480 490 450 460 470 480 490 500 ef0327 GDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQ 500 510 520 530 540 550 510 520 530 540 550 560 ef0327 ARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRA ::::::::::::::::::::.::::::::::::::.::::::::::::::.::::::::: gi|819 ARLALRGPAGPMGLTGRPGPMGPPGSGGLKGEPGDMGPQGPRGVQGPPGPTGKPGRRGRA 560 570 580 590 600 610 570 580 590 600 610 620 ef0327 GSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPR ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|819 GSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGLPGDDGERGDDGEVGPR 620 630 640 650 660 670 630 640 650 660 670 680 ef0327 GLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLP 680 690 700 710 720 730 690 700 710 720 730 740 ef0327 GPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPR 740 750 760 770 780 790 750 760 770 780 790 800 ef0327 GVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPN 800 810 820 830 840 850 810 820 830 840 850 860 ef0327 GDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQR :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GDPGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQR 860 870 880 890 900 910 870 880 890 900 910 920 ef0327 GPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKD 920 930 940 950 960 970 930 940 950 960 970 980 ef0327 GLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|819 GLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGVA 980 990 1000 1010 1020 1030 990 1000 1010 1020 1030 1040 ef0327 GKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGER :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|819 GKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGSEGPPGPPGPAGSPGER 1040 1050 1060 1070 1080 1090 1050 1060 1070 1080 1090 1100 ef0327 GPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPP ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|819 GPAGAAGPIGIPGRPGPQGPPGPAGEKGVPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPP 1100 1110 1120 1130 1140 1150 1110 1120 1130 1140 1150 1160 ef0327 GEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQK 1160 1170 1180 1190 1200 1210 1170 1180 1190 1200 1210 1220 ef0327 GDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPP :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GDEGSRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPP 1220 1230 1240 1250 1260 1270 1230 1240 1250 1260 1270 1280 ef0327 GGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDD ::::::::::::::::::::::::::::: ::::::::::: :::::::::::::::::: gi|819 GGIGNPGAVGEKGEPGEAGEPGLPGEGGPLGPKGERGEKGEVGPSGAAGPPGPKGPPGDD 1280 1290 1300 1310 1320 1330 1290 1300 1310 1320 1330 1340 ef0327 GPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKR 1340 1350 1360 1370 1380 1390 1350 1360 1370 1380 1390 1400 ef0327 GPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLP 1400 1410 1420 1430 1440 1450 1410 1420 1430 1440 1450 1460 ef0327 GSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSS 1460 1470 1480 1490 1500 1510 1470 1480 1490 1500 1510 1520 ef0327 GPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEV ::::::::::::::.:::::::::::::::::::::::::::::::::: :::::::::: gi|819 GPKGEQGITGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGLPGPPGPPGEV 1520 1530 1540 1550 1560 1570 1530 1540 1550 1560 1570 1580 ef0327 IQPLPIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQ :::::::::::::::::::::::: ::.:.:::::::::::::::::::::::::::::: gi|819 IQPLPIQASRTRRNIDASQLLDDGAGESYLDYADGMEEIFGSLNSLKLEIEQMKRPLGTQ 1580 1590 1600 1610 1620 1630 1590 1600 1610 1620 1630 1640 ef0327 QNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 QNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARI 1640 1650 1660 1670 1680 1690 1650 1660 1670 1680 1690 1700 ef0327 TSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAW :::::::::::::::::::::::::::::::::::::::::::::::::.::.::::::: gi|819 TSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNITYNCYQSVAW 1700 1710 1720 1730 1740 1750 1710 1720 1730 1740 1750 1760 ef0327 QDAATGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPI :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|819 QDAATGSYDKAIRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPI 1760 1770 1780 1790 1800 1810 1770 1780 1790 ef0327 VDIMFNDFGEASQKFGFEVGPACFMG ::::::::::::::::::::::::.: gi|819 VDIMFNDFGEASQKFGFEVGPACFLG 1820 1830 1840 1792 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Fri Aug 8 08:14:19 2008 done: Fri Aug 8 08:17:01 2008 Total Scan time: 1361.680 Total Display time: 2.070 Function used was FASTA [version 34.26.5 April 26, 2007]