hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-08170245/chunk_1/iprscan-20080808-08170245.nocrc
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Query sequence: ef03277
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
SM00038                                                 532.8   1.4e-155   1
SM00210                                                 263.1    2.2e-74   1
SM00282                                                  28.2     0.0011   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
SM00210           1/1       1   184 [.     1   218 []   263.1  2.2e-74
SM00282           1/1      52   183 ..     1   137 []    28.2   0.0011
SM00038           1/1    1562  1791 ..     1   240 []   532.8 1.4e-155

Alignments of top-scoring domains:
SM00210: domain 1 of 1, from 1 to 184: score 263.1, E = 2.2e-74
                   *->gfdllqvldLpessfgvrkvvglhatirvrGsdpsspAYrfgdidri
                              d++++++g++k++g++at  +r+s+++++AYr+++    
     ef03277     1    --------DFHNLPDGITKTTGFCAT--RRSSKGPDVAYRVTK---- 33   

                   pavvsqptrklfPasglpedFsllttfrqkpeTpksrgvLfaiydaqqnv
                   +a++s+pt++l+Pas++pedFs+ltt++ k+   +s+++L +iy++ q++
     ef03277    34 DAQLSAPTKQLYPASAFPEDFSILTTVKAKK---GSQAFLVSIYNE-QGI 79   

                   rqlglevneVrDGrantlllryqkgsdGkvhtvaFrgEllpLaDgqWHkl
                   +q+gle+     Gr+ ++l+++++g++G+ +++ Frg  ++L Dg+WH++
     ef03277    80 QQIGLEL-----GRSPVFLYEDHTGKPGPEDYPLFRG--INLSDGKWHRI 122  

                   aLsVsgssRGapavtLyVDCnkidsrpdldrpdqglppidtdGievlgaq
                   aLsV++++     vtL++DC+k ++++ ldr+d  +p+id++Gi+v+g++
     ef03277   123 ALSVHKKN-----VTLILDCKKKTTKF-LDRSD--HPMIDINGIIVFGTR 164  

                   aaqdekkfqgdlQqlkivcdp<-*
                   ++ de++f+gd+Qql++v d+   
     ef03277   165 IL-DEEVFEGDIQQLLFVSDH    184  

SM00282: domain 1 of 1, from 52 to 183: score 28.2, E = 0.0011
                   *->t.lsisfsFrTtspn.GlLlyag...ggdflaleLvlEDsdgdGrlv
                       ++si  +++  + ++++L+++ +++g + + leL       +  +v
     ef03277    52    EdFSILTTVKAKKGSqAFLVSIYneqGIQQIGLEL-------GRSPV 91   

                   lrydlGssttggparltsdsd.rptplnDGqWHrVsverngrsvtLsVDg
                   + y+       g+   +  +  r+  l+DG+WHr++++  +++vtL++D+
     ef03277    92 FLYEDHT----GKPGPEDYPLfRGINLSDGKWHRIALSVHKKNVTLILDC 137  

                   gnpvsges.....t.LdldkeesgplylGGlPelpvspgFrGCirnlrvn
                   +  ++   ++++++ +d +    g + +G +   +  + F G i+ l + 
     ef03277   138 KKKTTKFLdrsdhPmIDIN----GIIVFGTRI--LDEEVFEGDIQQLLFV 181  

                   gk<-*
                   +    
     ef03277   182 SD    183  

SM00038: domain 1 of 1, from 1562 to 1791: score 532.8, E = 1.4e-155
                   *->deeifasLkslnnLHKqIEqlksPtGskdnPARtCkDLkLcHpelkd
                      +eeif+sL+sl+    +IEq+k+P+G+++nPARtCkDL+LcHp+++d
     ef03277  1562    MEEIFGSLNSLKL---EIEQMKRPLGTQQNPARTCKDLQLCHPDFPD 1605 

                   GeYWvDPNqGCirDAikVfCnfetGvgeTCvspspssiprktWysgkskd
                   GeYWvDPNqGC+rD++kV+Cnf++G g+TCv+p+++s+++++++++k+  
     ef03277  1606 GEYWVDPNQGCSRDSFKVYCNFTAG-GSTCVFPDKKSEGARITSWPKE-- 1652 

                   kkhvWFgetmngGfkFsYgdsegspvgvvQLTFLRLLSteAsQniTYhCK
                   ++++WF+e+++ G+++sY+d+eg+pvgvvQ+TFLRLLS++A+Qn+TYhC+
     ef03277  1653 NPGSWFSEFKR-GKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCY 1701 

                   NSvAYmDeatGNlkkAlilrgsnDvElsaegnskftYeVLeDGCqkrtgk
                   +SvA++D+atG+++kAl++ gsnD+E+s++  +++++++L+DGC++++g+
     ef03277  1702 QSVAWQDAATGSYDKALRFLGSNDEEMSYD--NNPYIRALVDGCATKKGY 1749 

                   wgKTViEyrTkkteRLPIvDiAPsDIGGadQeFGveiGPVCFs<-*
                   + KTV+E++T+k+e++PIvDi+++D+G+a+Q+FG+e+GP+CF+   
     ef03277  1750 Q-KTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFM    1791 

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