hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-08403171/chunk_1/iprscan-20080808-08403171.nocrc
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Query sequence: ef03603
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00131                                                 191.4    8.5e-53   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00131    1/2      63   116 ..     1    56 []    90.5    2e-22
SM00131    2/2     134   187 ..     1    56 []   100.9  1.5e-25

Alignments of top-scoring domains:
SM00131: domain 1 of 2, from 63 to 116: score 90.5, E = 2e-22
                   *->dvCslpgpdtGptCg.sipRyyYdpetgkCepFtYgGaCgGNaNNFe
                      ++C  + +d Gp C+  + R++++  t++Ce+F+YgG C+GN+N+Fe
     ef03603    63    SFCAFK-ADDGP-CKaIMKRFFFNIFTRQCEEFIYGG-CEGNQNRFE 106  

                   tkeeCertCg<-*
                   ++eeC++ C    
     ef03603   107 SLEECKKMCT    116  

SM00131: domain 2 of 2, from 134 to 187: score 100.9, E = 1.5e-25
                   *->dvCslpgpdtGptCg.sipRyyYdpetgkCepFtYgGaCgGNaNNFe
                      d+C l   d+G  C+++i+Ry+Y+ +t++Ce+F+YgG C GN NNFe
     ef03603   134    DFCFLE-EDPGI-CRgYITRYFYNNQTKQCERFKYGG-CLGNMNNFE 177  

                   tkeeCertCg<-*
                   t+eeC+++C+   
     ef03603   178 TLEECKNICE    187  

//