hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-04492191/chunk_1/iprscan-20090618-04492191.nocrc
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Query sequence: ef04257
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00012.10.ls Hsp70 protein                                 1414.0          0   1
PF00012.10.fs Hsp70 protein                                 1412.1          0   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00012.10.fs   1/1      92   698 ..     1   618 []  1412.1        0
PF00012.10.ls   1/1      92   698 ..     1   618 []  1414.0        0

Alignments of top-scoring domains:
PF00012.10.fs: domain 1 of 1, from 92 to 698: score 1412.1, E = 0
                   *->viGIDLGTTNScVAVmeggkpevIaNaeGnRtTPSvVAFtkkGErLV
                      v+GIDLGTT+ScV+V+++g++e+IaN++GnR+TPS+VAFt++GErL+
     ef04257    92    VVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLI 138  

                   GqaAKrQavtNpeNTvfsvKRlIGRrfddpeVqsdikhvPykvvkdsngd
                   G+aAK+Q ++NpeNTvf++KRlIGR+++dp+Vq+dik++P+kvv++ + +
     ef04257   139 GDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEK-KTK 187  

                   awveveyl.GkkkqftPeeISAmvLqKlKetAEayLGekVtdAVITVPAY
                   ++++v++++G++k+f+PeeISAmvL+K+KetAEayLG+kVt+AV+TVPAY
     ef04257   188 PYIQVDIGgGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 237  

                   FNDaQRQATKDAGrIAGLnVlRIiNEPTAAALAYGLDKkdlpeeekernI
                   FNDaQRQATKDAG+IAGLnV+RIiNEPTAAA+AYGLDK ++     e+nI
     ef04257   238 FNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREG-----EKNI 282  

                   lVfDLGGGTFDVSiLeigdGVFEVkaTnGDThLGGeDFDnrlvdhlveeF
                   lVfDLGGGTFDVS+L+i++GVFEV+aTnGDThLGGeDFD+r+++h+++ +
     ef04257   283 LVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLY 332  

                   kkkegiDlskdkrAlqRLreaAEKAKieLSsssqteinLpfitadadGPk
                   kkk+g+D++kd+rA+q+Lr++ EKAK++LSs  q++++++++++++ G +
     ef04257   333 KKKTGKDVRKDNRAVQKLRREVEKAKRALSS--QHQARIEIESFYE-G-E 378  

                   hlsetLtRAkFEeLvadLfeRtlePvekaLkDAklsksdIdeVvLVGGsT
                   ++setLtRAkFEeL++dLf+ t++Pv+k+L+D++l+ksdIde+vLVGGsT
     ef04257   379 DFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGST 428  

                   RIPaVqelVkefFGGKePskgVNPDEAVAiGAAvQAGVLsGseeVkDvlL
                   RIP++q+lVkefF+GKePs+g+NPDEAVA+GAAvQAGVLsG++++ D++L
     ef04257   429 RIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTGDLVL 478  

                   LDVtPLSLGIETlGGvmtklIeRNTTIPtkkSqiFSTaaDNQtaVeIqVl
                   LDV+PL+LGIET GGvmtklI+RNT++PtkkSqiFSTa+DNQ++V+I+V+
     ef04257   479 LDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVY 528  

                   qGERelakDNklLGqFeLdGIpPAPrGvPQIeVtFdIDANGIlnVsAkDk
                   +GER+l+kDN+lLG+F+L+GIpPAPrGvPQIeVtF+ID+NGIl V+A+Dk
     ef04257   529 EGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDK 578  

                   gtgkeqkItItassgrLsddEIerMvkdAEkyaeeDkkrkeriEakNeaE
                   gtg+++kItIt++++rL+ +EIerMv+dAEk+aeeDkk keri+++Ne+E
     ef04257   579 GTGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELE 628  

                   slvystekslkee.klgdkvseadkekl.kkveeaiewLkealegeddAe
                   s++ys+++++ +++klg+k+s++dke+++k+vee+iewL+ +    +dA+
     ef04257   629 SYAYSLKNQIGDKeKLGGKLSSEDKETMeKAVEEKIEWLESH----QDAD 674  

                   keeikakteeLqkvvqkigekmyq<-*
                   +e++kak +eL+++vq+i++k+y    
     ef04257   675 IEDFKAKKKELEEIVQPIISKLYG    698  

PF00012.10.ls: domain 1 of 1, from 92 to 698: score 1414.0, E = 0
                   *->viGIDLGTTNScVAVmeggkpevIaNaeGnRtTPSvVAFtkkGErLV
                      v+GIDLGTT+ScV+V+++g++e+IaN++GnR+TPS+VAFt++GErL+
     ef04257    92    VVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLI 138  

                   GqaAKrQavtNpeNTvfsvKRlIGRrfddpeVqsdikhvPykvvkdsngd
                   G+aAK+Q ++NpeNTvf++KRlIGR+++dp+Vq+dik++P+kvv++ + +
     ef04257   139 GDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEK-KTK 187  

                   awveveyl.GkkkqftPeeISAmvLqKlKetAEayLGekVtdAVITVPAY
                   ++++v++++G++k+f+PeeISAmvL+K+KetAEayLG+kVt+AV+TVPAY
     ef04257   188 PYIQVDIGgGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 237  

                   FNDaQRQATKDAGrIAGLnVlRIiNEPTAAALAYGLDKkdlpeeekernI
                   FNDaQRQATKDAG+IAGLnV+RIiNEPTAAA+AYGLDK ++     e+nI
     ef04257   238 FNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREG-----EKNI 282  

                   lVfDLGGGTFDVSiLeigdGVFEVkaTnGDThLGGeDFDnrlvdhlveeF
                   lVfDLGGGTFDVS+L+i++GVFEV+aTnGDThLGGeDFD+r+++h+++ +
     ef04257   283 LVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLY 332  

                   kkkegiDlskdkrAlqRLreaAEKAKieLSsssqteinLpfitadadGPk
                   kkk+g+D++kd+rA+q+Lr++ EKAK++LSs  q++++++++++++ G +
     ef04257   333 KKKTGKDVRKDNRAVQKLRREVEKAKRALSS--QHQARIEIESFYE-G-E 378  

                   hlsetLtRAkFEeLvadLfeRtlePvekaLkDAklsksdIdeVvLVGGsT
                   ++setLtRAkFEeL++dLf+ t++Pv+k+L+D++l+ksdIde+vLVGGsT
     ef04257   379 DFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGST 428  

                   RIPaVqelVkefFGGKePskgVNPDEAVAiGAAvQAGVLsGseeVkDvlL
                   RIP++q+lVkefF+GKePs+g+NPDEAVA+GAAvQAGVLsG++++ D++L
     ef04257   429 RIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTGDLVL 478  

                   LDVtPLSLGIETlGGvmtklIeRNTTIPtkkSqiFSTaaDNQtaVeIqVl
                   LDV+PL+LGIET GGvmtklI+RNT++PtkkSqiFSTa+DNQ++V+I+V+
     ef04257   479 LDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVY 528  

                   qGERelakDNklLGqFeLdGIpPAPrGvPQIeVtFdIDANGIlnVsAkDk
                   +GER+l+kDN+lLG+F+L+GIpPAPrGvPQIeVtF+ID+NGIl V+A+Dk
     ef04257   529 EGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDK 578  

                   gtgkeqkItItassgrLsddEIerMvkdAEkyaeeDkkrkeriEakNeaE
                   gtg+++kItIt++++rL+ +EIerMv+dAEk+aeeDkk keri+++Ne+E
     ef04257   579 GTGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELE 628  

                   slvystekslkee.klgdkvseadkekl.kkveeaiewLkealegeddAe
                   s++ys+++++ +++klg+k+s++dke+++k+vee+iewL+ +    +dA+
     ef04257   629 SYAYSLKNQIGDKeKLGGKLSSEDKETMeKAVEEKIEWLESH----QDAD 674  

                   keeikakteeLqkvvqkigekmyq<-*
                   +e++kak +eL+++vq+i++k+y    
     ef04257   675 IEDFKAKKKELEEIVQPIISKLYG    698  

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