hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-10055103/chunk_1/iprscan-20080808-10055103.nocrc
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Query sequence: ef04341
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00620.17.fs RhoGAP domain                                  220.4    9.6e-65   1
PF00620.17.ls RhoGAP domain                                  222.4    9.6e-64   1
PF00130.12.fs Phorbol esters/diacylglycerol binding domain    33.6    1.3e-08   1
PF00130.12.ls Phorbol esters/diacylglycerol binding domain    35.6    1.6e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00130.12.fs   1/1     290   341 ..     1    55 []    33.6  1.3e-08
PF00130.12.ls   1/1     290   341 ..     1    55 []    35.6  1.6e-07
PF00620.17.fs   1/1     366   516 ..     1   155 []   220.4  9.6e-65
PF00620.17.ls   1/1     366   516 ..     1   155 []   222.4  9.6e-64

Alignments of top-scoring domains:
PF00130.12.fs: domain 1 of 1, from 290 to 341: score 33.6, E = 1.3e-08
                   *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek
                      H+Fv + t  +p +C  Cg+++  ++gk  lkC++C ++ H +C  +
     ef04341   290    HDFVSK-TVIKPESCVPCGKRI--KFGKLSLKCRDCRVVSHPECRDR 333  

                   VppeCgcg<-*
                    p  C++    
     ef04341   334 CPLPCIPT    341  

PF00130.12.ls: domain 1 of 1, from 290 to 341: score 35.6, E = 1.6e-07
                   *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek
                      H+Fv + t  +p +C  Cg+++  ++gk  lkC++C ++ H +C  +
     ef04341   290    HDFVSK-TVIKPESCVPCGKRI--KFGKLSLKCRDCRVVSHPECRDR 333  

                   VppeCgcg<-*
                    p  C++    
     ef04341   334 CPLPCIPT    341  

PF00620.17.fs: domain 1 of 1, from 366 to 516: score 220.4, E = 9.6e-65
                   *->PlivekCieflekrGLdtEGIyRvsGsksrikeLreafdrgedvdln
                      P iv++C++++e+rGL++ G+yR+sG+  ++keL+e+f r + v l 
     ef04341   366    PSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPL- 411  

                   dleeedvhvvAslLKlFLReLPePLltfelyeefieaaaksedeeerlea
                   + +  d+h+++slLK+FLR+L ePLltf+l  +f+e aa++ de++ + a
     ef04341   412 LSKVDDIHAICSLLKDFLRNLKEPLLTFRLNRAFME-AAEITDEDNSIAA 460  

                   lrellrkLPpaNrdtLryLlahLnrVaqnsevNkMtahNLAivFgPtLlr
                   +++++ +LP+aNrdtL++L+ hL+rVaq+ + +kM++ NLA vFgPt++ 
     ef04341   461 MYQAVGELPQANRDTLAFLMIHLQRVAQSPH-TKMDVANLAKVFGPTIVA 509  

                   ppdgdsad<-*
                   + +  ++d   
     ef04341   510 HAVP-NPD    516  

PF00620.17.ls: domain 1 of 1, from 366 to 516: score 222.4, E = 9.6e-64
                   *->PlivekCieflekrGLdtEGIyRvsGsksrikeLreafdrgedvdln
                      P iv++C++++e+rGL++ G+yR+sG+  ++keL+e+f r + v l 
     ef04341   366    PSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPL- 411  

                   dleeedvhvvAslLKlFLReLPePLltfelyeefieaaaksedeeerlea
                   + +  d+h+++slLK+FLR+L ePLltf+l  +f+e aa++ de++ + a
     ef04341   412 LSKVDDIHAICSLLKDFLRNLKEPLLTFRLNRAFME-AAEITDEDNSIAA 460  

                   lrellrkLPpaNrdtLryLlahLnrVaqnsevNkMtahNLAivFgPtLlr
                   +++++ +LP+aNrdtL++L+ hL+rVaq+ + +kM++ NLA vFgPt++ 
     ef04341   461 MYQAVGELPQANRDTLAFLMIHLQRVAQSPH-TKMDVANLAKVFGPTIVA 509  

                   ppdgdsad<-*
                   + +  ++d   
     ef04341   510 HAVP-NPD    516  

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