hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-10320628/chunk_1/iprscan-20080808-10320628.nocrc
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Query sequence: ef04758
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00787.14.fs PX domain                                      120.4    3.3e-36   1
PF00787.14.ls PX domain                                      122.2    1.4e-33   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00787.14.fs   1/1     112   222 ..     1   131 []   120.4  3.3e-36
PF00787.14.ls   1/1     112   222 ..     1   131 []   122.2  1.4e-33

Alignments of top-scoring domains:
PF00787.14.fs: domain 1 of 1, from 112 to 222: score 120.4, E = 3.3e-36
                   *->dpilivvvvdpetsrkkegdkkhtyyvyevttktnkewsVkRRYsdF
                      ++++ +vv dp++ +k++g k++ +y  + t ++   +sV +RY++F
     ef04758   112    TSTFDCVVADPRKGSKMYGLKSYIEYQLTPTNTN---RSVNHRYKHF 155  

                   eeLhekLlrkfp.grilPplPpKklfgryrkeslpmtsvwhssnnfdeef
                    +L+e+Ll kf++++++P lP+K++ gr                 f+eef
     ef04758   156 DWLYERLLVKFGsAIPIPSLPDKQVTGR-----------------FEEEF 188  

                   iekRrkgLeeyLqrllqhPelsnesevvleFLesd<-*
                   i++R + L+++++r+++hP++s+ sev+++FL+++   
     ef04758   189 IKMRMERLQAWMTRMCRHPVISE-SEVFQQFLNFR    222  

PF00787.14.ls: domain 1 of 1, from 112 to 222: score 122.2, E = 1.4e-33
                   *->dpilivvvvdpetsrkkegdkkhtyyvyevttktnkewsVkRRYsdF
                      ++++ +vv dp++ +k++g k++ +y  + t ++   +sV +RY++F
     ef04758   112    TSTFDCVVADPRKGSKMYGLKSYIEYQLTPTNTN---RSVNHRYKHF 155  

                   eeLhekLlrkfp.grilPplPpKklfgryrkeslpmtsvwhssnnfdeef
                    +L+e+Ll kf++++++P lP+K++ gr                 f+eef
     ef04758   156 DWLYERLLVKFGsAIPIPSLPDKQVTGR-----------------FEEEF 188  

                   iekRrkgLeeyLqrllqhPelsnesevvleFLesd<-*
                   i++R + L+++++r+++hP++s+ sev+++FL+++   
     ef04758   189 IKMRMERLQAWMTRMCRHPVISE-SEVFQQFLNFR    222  

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