hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-12120716/chunk_1/iprscan-20080808-12120716.nocrc
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Query sequence: ef06171
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00220                                                 335.9    2.7e-96   1
SM00219                                                  43.1    8.3e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1     116   368 ..     1   280 []    43.1  8.3e-14
SM00220    1/1     116   368 ..     1   231 []   335.9  2.7e-96

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 116 to 368: score 43.1, E = 8.3e-14
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda......keeFl
                         gk+LG G F + y+ t  +++   A K + ++   +++++e + 
     ef06171   116    YCRGKVLGKGGFAKCYEMTDLtnnKVYAAKIIPHSRvakphqREKID 162  

                   rEakiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLld
                   +E+++ + l  +H+++V+++ +  ++       e ++i++Ey++  +  +
     ef06171   163 KEIELHRIL--HHKHVVQFYHYFEDK-------ENIYILLEYCSRRSMAH 203  

                   yLrknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenkv
                    L++++  l+ ++  ++  QI +G  YL+++ + HRDL   N  ++e   
     ef06171   204 ILKARKV-LTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINEAME 252  

                   vKIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEslkdg
                    K++DFGL+  l+            r ++  +g        ++PE+l++ 
     ef06171   253 LKVGDFGLAARLEPL--------EHRRRT-ICGTP----NYLSPEVLNKQ 289  

                   kFtskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGyRlp
                       +SD+W+ G +++ ++ lG +P +       + +e ++++++ ++ +
     ef06171   290 GHGCESDIWALGCVMYTML-LGRPPFET-----TNLKETYRCIREARYTM 333  

                   kPendlpiSsvtCPdelYdlMlqCWaedPedRPtFsel..verl<-*
                   +           +P++   l+ +    +PedRP+  ++ +++++   
     ef06171   334 PSSLL-------APAK--HLIASMLSKNPEDRPSLDDIirHDFF    368  

SM00220: domain 1 of 1, from 116 to 368: score 335.9, E = 2.7e-96
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik..........eril
                      Y  +k+lGkG+F+k+y  +d   ++++A K+i++++  +++++e+i 
     ef06171   116    YCRGKVLGKGGFAKCYEMTDLTNNKVYAAKIIPhsrvakphqrEKID 162  

                   rEikiLkk.dHPNIVkLydvfed.dklylVmEyceGdlGdLfdllkkrgr
                   +Ei++++  +H+++V++y +fed++++y+ +Eyc+    ++ ++lk r+ 
     ef06171   163 KEIELHRIlHHKHVVQFYHYFEDkENIYILLEYCSR--RSMAHILKARKV 210  

                   rglrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds..hvK
                         l+E+e+r+y+rQi+s+L+YLH+q I+HRDLK  N ++++  ++K
     ef06171   211 ------LTEpEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINEamELK 254  

                   laDFGlArql.......ttfvGTpeYmAPEvl...gYgkpavDiWSlGci
                   ++DFGlA++l++ +++++t++GTp+Y++PEvl+++g+g+ ++DiW+lGc+
     ef06171   255 VGDFGLAARLeplehrrRTICGTPNYLSPEVLnkqGHGC-ESDIWALGCV 303  

                   lyElltGkpPFp..qldlifkkig..........SpeakdLikklLvkdP
                   +y +l G+pPF++++l+++++ i++ +++ +++   +ak+Li  +L k+P
     ef06171   304 MYTMLLGRPPFEttNLKETYRCIRearytmpsslLAPAKHLIASMLSKNP 353  

                   ekRlta.eaLedeldikaHPff<-*
                   e+R++ +++ +       H ff   
     ef06171   354 EDRPSLdDIIR-------HDFF    368  

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